RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 PLEKHG5O94827 1062 aa18.09■□□□□ 0.49
NCLN-201ENST00000246117 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
NCLN-201ENST00000246117 PPM1GO15355 546 aaPredicted RBP18.08■□□□□ 0.49
NCLN-201ENST00000246117 KIF7Q2M1P5 1343 aa18.07■□□□□ 0.48
NCLN-201ENST00000246117 C11orf95C9JLR9 678 aaPredicted RBP18.07■□□□□ 0.48
NCLN-201ENST00000246117 ROCK2O75116 1388 aaKnown RBP18.06■□□□□ 0.48
NCLN-201ENST00000246117 NPM1P06748 294 aaKnown RBP eCLIP18.05■□□□□ 0.48
NCLN-201ENST00000246117 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
NCLN-201ENST00000246117 NUTM2DQ5VT03 806 aaPredicted RBP18.04■□□□□ 0.48
NCLN-201ENST00000246117 CCDC146Q8IYE0 955 aa18.04■□□□□ 0.48
NCLN-201ENST00000246117 GAPVD1Q14C86 1478 aa18.04■□□□□ 0.48
NCLN-201ENST00000246117 ERICH3Q5RHP9 1530 aa18.04■□□□□ 0.48
NCLN-201ENST00000246117 NEFMP07197 916 aa18.03■□□□□ 0.48
NCLN-201ENST00000246117 NUDCQ9Y266 331 aa18.03■□□□□ 0.48
NCLN-201ENST00000246117 DEKP35659 375 aaKnown RBP18.03■□□□□ 0.48
NCLN-201ENST00000246117 NCOA2Q15596 1464 aa18.03■□□□□ 0.48
NCLN-201ENST00000246117 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.02■□□□□ 0.48
NCLN-201ENST00000246117 MYOM3Q5VTT5 1437 aa18.02■□□□□ 0.47
NCLN-201ENST00000246117 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
NCLN-201ENST00000246117 EXOC6Q8TAG9 804 aa18.01■□□□□ 0.47
NCLN-201ENST00000246117 TMF1P82094 1093 aa18■□□□□ 0.47
NCLN-201ENST00000246117 USP47Q96K76 1375 aa18■□□□□ 0.47
NCLN-201ENST00000246117 GGT6Q6P531 493 aa17.98■□□□□ 0.47
NCLN-201ENST00000246117 CCDC7Q96M83 1385 aa17.98■□□□□ 0.47
NCLN-201ENST00000246117 ANKRD30AQ9BXX3 1397 aa17.98■□□□□ 0.47
NCLN-201ENST00000246117 SLC4A3P48751 1232 aa17.97■□□□□ 0.47
NCLN-201ENST00000246117 PANK3Q9H999 370 aa17.96■□□□□ 0.47
NCLN-201ENST00000246117 CASKIN1Q8WXD9 1431 aa17.96■□□□□ 0.47
NCLN-201ENST00000246117 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
NCLN-201ENST00000246117 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
NCLN-201ENST00000246117 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
NCLN-201ENST00000246117 U2SURPO15042 1029 aaKnown RBP17.93■□□□□ 0.46
NCLN-201ENST00000246117 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
NCLN-201ENST00000246117 HSP90AA1P07900 732 aaKnown RBP17.93■□□□□ 0.46
NCLN-201ENST00000246117 STK26Q9P289 416 aa17.93■□□□□ 0.46
NCLN-201ENST00000246117 UNC13AQ9UPW8 1703 aa17.92■□□□□ 0.46
NCLN-201ENST00000246117 CDCA7LQ96GN5 454 aa17.92■□□□□ 0.46
NCLN-201ENST00000246117 ZBED9Q6R2W3 1325 aa17.92■□□□□ 0.46
NCLN-201ENST00000246117 UPF2Q9HAU5 1272 aaKnown RBP17.91■□□□□ 0.46
NCLN-201ENST00000246117 NBPF1Q3BBV0 1214 aa17.91■□□□□ 0.46
NCLN-201ENST00000246117 RRP7AQ9Y3A4 280 aaKnown RBP17.91■□□□□ 0.46
NCLN-201ENST00000246117 KIF3BO15066 747 aa17.9■□□□□ 0.46
NCLN-201ENST00000246117 CLUAP1Q96AJ1 413 aa17.9■□□□□ 0.46
NCLN-201ENST00000246117 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
NCLN-201ENST00000246117 SKAP1Q86WV1 359 aa17.88■□□□□ 0.45
NCLN-201ENST00000246117 AKNAQ7Z591 1439 aa17.88■□□□□ 0.45
NCLN-201ENST00000246117 BCL2L13Q9BXK5 485 aa17.88■□□□□ 0.45
NCLN-201ENST00000246117 NAIPQ13075 1403 aa17.87■□□□□ 0.45
NCLN-201ENST00000246117 CARMIL2Q6F5E8 1435 aa17.86■□□□□ 0.45
NCLN-201ENST00000246117 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
NCLN-201ENST00000246117 SOX12O15370 315 aa17.86■□□□□ 0.45
NCLN-201ENST00000246117 RALBP1Q15311 655 aa17.85■□□□□ 0.45
NCLN-201ENST00000246117 PCF11O94913 1555 aaKnown RBP17.84■□□□□ 0.45
NCLN-201ENST00000246117 MLECQ14165 292 aa17.84■□□□□ 0.45
NCLN-201ENST00000246117 ESF1Q9H501 851 aaKnown RBP17.84■□□□□ 0.45
NCLN-201ENST00000246117 PTPRKQ15262 1439 aa17.84■□□□□ 0.45
NCLN-201ENST00000246117 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
NCLN-201ENST00000246117 CDCA8Q53HL2 280 aa17.83■□□□□ 0.45
NCLN-201ENST00000246117 PRG4Q92954 1404 aaPredicted RBP17.83■□□□□ 0.44
NCLN-201ENST00000246117 CRBNQ96SW2 442 aa17.83■□□□□ 0.44
NCLN-201ENST00000246117 HFM1A2PYH4 1435 aa17.83■□□□□ 0.44
NCLN-201ENST00000246117 CDK13Q14004 1512 aaKnown RBP17.83■□□□□ 0.44
NCLN-201ENST00000246117 TRAK1Q9UPV9 953 aa17.82■□□□□ 0.44
NCLN-201ENST00000246117 FYCO1Q9BQS8 1478 aa17.82■□□□□ 0.44
NCLN-201ENST00000246117 MORC1Q86VD1 984 aa17.82■□□□□ 0.44
NCLN-201ENST00000246117 PAK3O75914 559 aaPredicted RBP17.82■□□□□ 0.44
NCLN-201ENST00000246117 FTSJ3Q8IY81 847 aaKnown RBP17.82■□□□□ 0.44
NCLN-201ENST00000246117 MYBBP1AQ9BQG0 1328 aaKnown RBP17.81■□□□□ 0.44
NCLN-201ENST00000246117 MSH5O43196 834 aa17.81■□□□□ 0.44
NCLN-201ENST00000246117 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
NCLN-201ENST00000246117 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
NCLN-201ENST00000246117 SLKQ9H2G2 1235 aaPredicted RBP17.8■□□□□ 0.44
NCLN-201ENST00000246117 MAPKBP1O60336 1514 aa17.8■□□□□ 0.44
NCLN-201ENST00000246117 SRPK2P78362 688 aaKnown RBP17.79■□□□□ 0.44
NCLN-201ENST00000246117 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
NCLN-201ENST00000246117 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
NCLN-201ENST00000246117 POGKQ9P215 609 aa17.78■□□□□ 0.44
NCLN-201ENST00000246117 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
NCLN-201ENST00000246117 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
NCLN-201ENST00000246117 APAF1O14727 1248 aa17.77■□□□□ 0.44
NCLN-201ENST00000246117 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.43
NCLN-201ENST00000246117 KIF15Q9NS87 1388 aa17.77■□□□□ 0.43
NCLN-201ENST00000246117 U2AF1L5P0DN76 240 aaPredicted RBP17.77■□□□□ 0.43
NCLN-201ENST00000246117 PDE4AP27815 886 aa17.77■□□□□ 0.43
NCLN-201ENST00000246117 U2AF1Q01081 240 aaKnown RBP eCLIP17.77■□□□□ 0.43
NCLN-201ENST00000246117 TPRNQ4KMQ1 711 aa17.76■□□□□ 0.43
NCLN-201ENST00000246117 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
NCLN-201ENST00000246117 ZBTB7CA1YPR0 619 aa17.76■□□□□ 0.43
NCLN-201ENST00000246117 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
NCLN-201ENST00000246117 ANKRD50Q9ULJ7 1429 aa17.75■□□□□ 0.43
NCLN-201ENST00000246117 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
NCLN-201ENST00000246117 AFAP1Q8N556 730 aa17.74■□□□□ 0.43
NCLN-201ENST00000246117 HMGXB3Q12766 1538 aa17.74■□□□□ 0.43
NCLN-201ENST00000246117 SPAG9O60271 1321 aaKnown RBP17.74■□□□□ 0.43
NCLN-201ENST00000246117 PTPRGP23470 1445 aa17.73■□□□□ 0.43
NCLN-201ENST00000246117 ADAMTS8Q9UP79 889 aa17.72■□□□□ 0.43
NCLN-201ENST00000246117 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
NCLN-201ENST00000246117 TCERG1O14776 1098 aaKnown RBP17.71■□□□□ 0.43
NCLN-201ENST00000246117 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.43
NCLN-201ENST00000246117 PEG3Q9GZU2 1588 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms