RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 TRIM52Q96A61 297 aa37.37■■■■□ 3.57
RTN2-201ENST00000245923 ITSN2Q9NZM3 1697 aa37.37■■■■□ 3.57
RTN2-201ENST00000245923 PRG4Q92954 1404 aaPredicted RBP37.34■■■■□ 3.57
RTN2-201ENST00000245923 HIRIP3Q9BW71 556 aaPredicted RBP37.33■■■■□ 3.57
RTN2-201ENST00000245923 MPHOSPH9Q99550 1183 aa37.33■■■■□ 3.57
RTN2-201ENST00000245923 JPH4Q96JJ6 628 aa37.31■■■■□ 3.56
RTN2-201ENST00000245923 FBLN2P98095 1184 aa37.3■■■■□ 3.56
RTN2-201ENST00000245923 ZNF644Q9H582 1327 aaPredicted RBP37.3■■■■□ 3.56
RTN2-201ENST00000245923 KCNH8Q96L42 1107 aa37.27■■■■□ 3.56
RTN2-201ENST00000245923 CAMSAP2Q08AD1 1489 aa37.25■■■■□ 3.55
RTN2-201ENST00000245923 KIF14Q15058 1648 aa37.25■■■■□ 3.55
RTN2-201ENST00000245923 GPATCH8Q9UKJ3 1502 aaKnown RBP37.25■■■■□ 3.55
RTN2-201ENST00000245923 ABCA8O94911 1581 aa37.22■■■■□ 3.55
RTN2-201ENST00000245923 ADGBQ8N7X0 1667 aa37.21■■■■□ 3.55
RTN2-201ENST00000245923 CROCC2H7BZ55 1655 aa37.17■■■■□ 3.54
RTN2-201ENST00000245923 CFDP1Q9UEE9 299 aaPredicted RBP37.17■■■■□ 3.54
RTN2-201ENST00000245923 CCER2I3L3R5 266 aa37.16■■■■□ 3.54
RTN2-201ENST00000245923 ANKRD30BQ9BXX2 1392 aa37.15■■■■□ 3.54
RTN2-201ENST00000245923 ADGRL2O95490 1459 aa37.12■■■■□ 3.53
RTN2-201ENST00000245923 ANP32CO43423 234 aa37.12■■■■□ 3.53
RTN2-201ENST00000245923 RPRD2Q5VT52 1461 aaKnown RBP37.11■■■■□ 3.53
RTN2-201ENST00000245923 NCOA1Q15788 1441 aa37.1■■■■□ 3.53
RTN2-201ENST00000245923 CDC42BPAQ5VT25 1732 aa37.08■■■■□ 3.53
RTN2-201ENST00000245923 FOXD1Q16676 465 aa37.06■■■■□ 3.52
RTN2-201ENST00000245923 ATP10BO94823 1461 aa37.06■■■■□ 3.52
RTN2-201ENST00000245923 L3MBTL2Q969R5 705 aa37.05■■■■□ 3.52
RTN2-201ENST00000245923 ABCC10Q5T3U5 1492 aa37.04■■■■□ 3.52
RTN2-201ENST00000245923 PZPP20742 1482 aa37.02■■■■□ 3.52
RTN2-201ENST00000245923 TEX14Q8IWB6 1497 aa37.01■■■■□ 3.52
RTN2-201ENST00000245923 PLEKHD1A6NEE1 506 aa37.01■■■■□ 3.52
RTN2-201ENST00000245923 HSPA5P11021 654 aaKnown RBP37■■■■□ 3.51
RTN2-201ENST00000245923 SLC4A1APQ9BWU0 796 aaKnown RBP37■■■■□ 3.51
RTN2-201ENST00000245923 SUPT16HQ9Y5B9 1047 aaKnown RBP36.96■■■■□ 3.51
RTN2-201ENST00000245923 EIF4G2P78344 907 aaKnown RBP eCLIP36.96■■■■□ 3.51
RTN2-201ENST00000245923 ZNF777Q9ULD5 760 aaPredicted RBP36.96■■■■□ 3.51
RTN2-201ENST00000245923 ANKRD30AQ9BXX3 1397 aa36.94■■■■□ 3.5
RTN2-201ENST00000245923 SHANK2Q9UPX8 1470 aa36.93■■■■□ 3.5
RTN2-201ENST00000245923 WASHC2AQ641Q2 1341 aa36.91■■■■□ 3.5
RTN2-201ENST00000245923 CHD1O14646 1710 aa36.87■■■■□ 3.49
RTN2-201ENST00000245923 PTPRGP23470 1445 aa36.87■■■■□ 3.49
RTN2-201ENST00000245923 KIAA1107Q9UPP5 1409 aa36.85■■■■□ 3.49
RTN2-201ENST00000245923 ANKRD50Q9ULJ7 1429 aa36.83■■■■□ 3.49
RTN2-201ENST00000245923 NBPF8Q3BBV2 869 aa36.83■■■■□ 3.49
RTN2-201ENST00000245923 C9orf84Q5VXU9 1444 aa36.81■■■■□ 3.48
RTN2-201ENST00000245923 ARHGEF5Q12774 1597 aa36.8■■■■□ 3.48
RTN2-201ENST00000245923 SHROOM2Q13796 1616 aa36.79■■■■□ 3.48
RTN2-201ENST00000245923 POLR1AO95602 1720 aaPredicted RBP36.76■■■■□ 3.47
RTN2-201ENST00000245923 MBD5Q9P267 1494 aa36.75■■■■□ 3.47
RTN2-201ENST00000245923 CNTLNQ9NXG0 1405 aa36.75■■■■□ 3.47
RTN2-201ENST00000245923 SPATA31E1Q6ZUB1 1445 aa36.74■■■■□ 3.47
RTN2-201ENST00000245923 KDM5DQ9BY66 1539 aa36.73■■■■□ 3.47
RTN2-201ENST00000245923 PREX2Q70Z35 1606 aa36.72■■■■□ 3.47
RTN2-201ENST00000245923 CCDC7Q96M83 1385 aa36.72■■■■□ 3.47
RTN2-201ENST00000245923 CDC42BPBQ9Y5S2 1711 aa36.71■■■■□ 3.47
RTN2-201ENST00000245923 PKD2Q13563 968 aa36.69■■■■□ 3.46
RTN2-201ENST00000245923 TSPY4P0CV99 314 aa36.67■■■■□ 3.46
RTN2-201ENST00000245923 TSPY10P0CW01 314 aa36.67■■■■□ 3.46
RTN2-201ENST00000245923 SAMD9LQ8IVG5 1584 aa36.67■■■■□ 3.46
RTN2-201ENST00000245923 C11orf95C9JLR9 678 aaPredicted RBP36.66■■■■□ 3.46
RTN2-201ENST00000245923 NUP155O75694 1391 aa36.61■■■■□ 3.45
RTN2-201ENST00000245923 CCDC141Q6ZP82 1450 aa36.61■■■■□ 3.45
RTN2-201ENST00000245923 KIF15Q9NS87 1388 aa36.6■■■■□ 3.45
RTN2-201ENST00000245923 HNRNPMP52272 730 aaKnown RBP eCLIP36.6■■■■□ 3.45
RTN2-201ENST00000245923 RSPH4AQ5TD94 716 aa36.55■■■■□ 3.44
RTN2-201ENST00000245923 ABCC2Q92887 1545 aa36.53■■■■□ 3.44
RTN2-201ENST00000245923 TTC37Q6PGP7 1564 aa36.52■■■■□ 3.44
RTN2-201ENST00000245923 KIF7Q2M1P5 1343 aa36.52■■■■□ 3.44
RTN2-201ENST00000245923 UHRF1BP1Q6BDS2 1440 aa36.52■■■■□ 3.44
RTN2-201ENST00000245923 ARHGEF12Q9NZN5 1544 aa36.51■■■■□ 3.43
RTN2-201ENST00000245923 MAST1Q9Y2H9 1570 aa36.5■■■■□ 3.43
RTN2-201ENST00000245923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.5■■■■□ 3.43
RTN2-201ENST00000245923 ERCC6L2Q5T890 1561 aa36.49■■■■□ 3.43
RTN2-201ENST00000245923 KDM5CP41229 1560 aa36.45■■■■□ 3.43
RTN2-201ENST00000245923 PRKRIP1Q9H875 184 aaPredicted RBP36.45■■■■□ 3.43
RTN2-201ENST00000245923 MYO5CQ9NQX4 1742 aa36.45■■■■□ 3.43
RTN2-201ENST00000245923 SYCP2Q9BX26 1530 aa36.44■■■■□ 3.42
RTN2-201ENST00000245923 ARHGAP5Q13017 1502 aa36.44■■■■□ 3.42
RTN2-201ENST00000245923 FKBP8Q14318 412 aa36.43■■■■□ 3.42
RTN2-201ENST00000245923 RALGAPBQ86X10 1494 aa36.43■■■■□ 3.42
RTN2-201ENST00000245923 USP47Q96K76 1375 aa36.42■■■■□ 3.42
RTN2-201ENST00000245923 BCORL1Q5H9F3 1711 aa36.41■■■■□ 3.42
RTN2-201ENST00000245923 FAM135AQ9P2D6 1515 aa36.4■■■■□ 3.42
RTN2-201ENST00000245923 HNRNPUQ00839 825 aaKnown RBP eCLIP36.38■■■■□ 3.41
RTN2-201ENST00000245923 PLEKHH2Q8IVE3 1493 aa36.37■■■■□ 3.41
RTN2-201ENST00000245923 UNC13BO14795 1591 aa36.37■■■■□ 3.41
RTN2-201ENST00000245923 NEFLP07196 543 aa36.36■■■■□ 3.41
RTN2-201ENST00000245923 CLASP1Q7Z460 1538 aa36.36■■■■□ 3.41
RTN2-201ENST00000245923 PLXNC1O60486 1568 aa36.35■■■■□ 3.41
RTN2-201ENST00000245923 ZNF326Q5BKZ1 582 aaKnown RBP36.33■■■■□ 3.41
RTN2-201ENST00000245923 ARID4BQ4LE39 1312 aaPredicted RBP36.33■■■■□ 3.41
RTN2-201ENST00000245923 CCDC184Q52MB2 194 aa36.32■■■■□ 3.41
RTN2-201ENST00000245923 ZCCHC11Q5TAX3 1644 aaKnown RBP36.3■■■■□ 3.4
RTN2-201ENST00000245923 UHRF1BP1LA0JNW5 1464 aa36.29■■■■□ 3.4
RTN2-201ENST00000245923 BCANQ96GW7 911 aa36.24■■■■□ 3.39
RTN2-201ENST00000245923 DHX29Q7Z478 1369 aaKnown RBP36.24■■■■□ 3.39
RTN2-201ENST00000245923 IQGAP3Q86VI3 1631 aa36.22■■■■□ 3.39
RTN2-201ENST00000245923 PLCH2O75038 1416 aa36.21■■■■□ 3.39
RTN2-201ENST00000245923 MRS2Q9HD23 443 aa36.21■■■■□ 3.39
RTN2-201ENST00000245923 DUOX2Q9NRD8 1548 aa36.2■■■■□ 3.39
RTN2-201ENST00000245923 CARD11Q9BXL7 1154 aa36.19■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms