RNA–Protein interactions for RNA: ENST00000245414.8

IRF1-201, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-201ENST00000245414 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
IRF1-201ENST00000245414 PRDM4Q9UKN5 801 aa12.72□□□□□ -0.37
IRF1-201ENST00000245414 MAPKBP1O60336 1514 aa12.72□□□□□ -0.37
IRF1-201ENST00000245414 CC2D2AQ9P2K1 1620 aa12.72□□□□□ -0.37
IRF1-201ENST00000245414 ZHX1Q9UKY1 873 aaPredicted RBP12.71□□□□□ -0.37
IRF1-201ENST00000245414 TPM2P07951 284 aa12.7□□□□□ -0.38
IRF1-201ENST00000245414 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
IRF1-201ENST00000245414 CHMP4BQ9H444 224 aaKnown RBP12.7□□□□□ -0.38
IRF1-201ENST00000245414 SLKQ9H2G2 1235 aaPredicted RBP12.7□□□□□ -0.38
IRF1-201ENST00000245414 SMG6Q86US8 1419 aaKnown RBP12.7□□□□□ -0.38
IRF1-201ENST00000245414 POLR3GLQ9BT43 218 aa12.7□□□□□ -0.38
IRF1-201ENST00000245414 NAP1L2Q9ULW6 460 aaPredicted RBP12.7□□□□□ -0.38
IRF1-201ENST00000245414 SETD5Q9C0A6 1442 aa12.69□□□□□ -0.38
IRF1-201ENST00000245414 PANK2Q9BZ23 570 aa12.69□□□□□ -0.38
IRF1-201ENST00000245414 FAM13BQ9NYF5 915 aa12.68□□□□□ -0.38
IRF1-201ENST00000245414 HSPA5P11021 654 aaKnown RBP12.68□□□□□ -0.38
IRF1-201ENST00000245414 XRCC6P12956 609 aaKnown RBP eCLIP12.68□□□□□ -0.38
IRF1-201ENST00000245414 CFTRP13569 1480 aa12.67□□□□□ -0.38
IRF1-201ENST00000245414 TAF7LQ5H9L4 462 aa12.67□□□□□ -0.38
IRF1-201ENST00000245414 ESPNB1AK53 854 aa12.66□□□□□ -0.38
IRF1-201ENST00000245414 MYH16Q9H6N6 1097 aa12.66□□□□□ -0.38
IRF1-201ENST00000245414 TOP2BQ02880 1626 aa12.66□□□□□ -0.38
IRF1-201ENST00000245414 RRP1P56182 461 aaKnown RBP12.65□□□□□ -0.38
IRF1-201ENST00000245414 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
IRF1-201ENST00000245414 PRDM10Q9NQV6 1147 aa12.65□□□□□ -0.38
IRF1-201ENST00000245414 KIAA1211Q6ZU35 1233 aa12.65□□□□□ -0.38
IRF1-201ENST00000245414 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
IRF1-201ENST00000245414 RRBP1Q9P2E9 1410 aaKnown RBP12.64□□□□□ -0.39
IRF1-201ENST00000245414 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
IRF1-201ENST00000245414 EIF4G2P78344 907 aaKnown RBP eCLIP12.64□□□□□ -0.39
IRF1-201ENST00000245414 BIVM-ERCC5R4GMW8 1640 aa12.63□□□□□ -0.39
IRF1-201ENST00000245414 CENPJQ9HC77 1338 aaPredicted RBP12.63□□□□□ -0.39
IRF1-201ENST00000245414 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
IRF1-201ENST00000245414 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
IRF1-201ENST00000245414 CUX2O14529 1486 aa12.61□□□□□ -0.39
IRF1-201ENST00000245414 RCAN3Q9UKA8 241 aa12.61□□□□□ -0.39
IRF1-201ENST00000245414 CUX1P39880 1505 aa12.6□□□□□ -0.39
IRF1-201ENST00000245414 BECN1Q14457 450 aa12.6□□□□□ -0.39
IRF1-201ENST00000245414 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
IRF1-201ENST00000245414 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
IRF1-201ENST00000245414 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
IRF1-201ENST00000245414 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
IRF1-201ENST00000245414 TMC1Q8TDI8 760 aa12.58□□□□□ -0.4
IRF1-201ENST00000245414 CNTLNQ9NXG0 1405 aa12.58□□□□□ -0.4
IRF1-201ENST00000245414 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
IRF1-201ENST00000245414 ANP32BQ92688 251 aaKnown RBP12.58□□□□□ -0.4
IRF1-201ENST00000245414 PLIN1O60240 522 aa12.57□□□□□ -0.4
IRF1-201ENST00000245414 MAP7D2Q96T17 732 aa12.57□□□□□ -0.4
IRF1-201ENST00000245414 CADPSQ9ULU8 1353 aa12.57□□□□□ -0.4
IRF1-201ENST00000245414 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
IRF1-201ENST00000245414 MRE11P49959 708 aa12.56□□□□□ -0.4
IRF1-201ENST00000245414 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
IRF1-201ENST00000245414 SMAP1Q8IYB5 467 aaPredicted RBP12.55□□□□□ -0.4
IRF1-201ENST00000245414 STAC3Q96MF2 364 aa12.54□□□□□ -0.4
IRF1-201ENST00000245414 CDK11BP21127 795 aaKnown RBP12.53□□□□□ -0.4
IRF1-201ENST00000245414 ERBB4Q15303 1308 aa12.53□□□□□ -0.4
IRF1-201ENST00000245414 VGLL3A8MV65 326 aa12.53□□□□□ -0.4
IRF1-201ENST00000245414 MSNP26038 577 aaKnown RBP12.53□□□□□ -0.4
IRF1-201ENST00000245414 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
IRF1-201ENST00000245414 CRBNQ96SW2 442 aa12.52□□□□□ -0.4
IRF1-201ENST00000245414 GRPEL1Q9HAV7 217 aa12.51□□□□□ -0.41
IRF1-201ENST00000245414 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
IRF1-201ENST00000245414 FHAD1B1AJZ9 1412 aa12.51□□□□□ -0.41
IRF1-201ENST00000245414 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
IRF1-201ENST00000245414 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
IRF1-201ENST00000245414 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.49□□□□□ -0.41
IRF1-201ENST00000245414 FSD2A1L4K1 749 aa12.48□□□□□ -0.41
IRF1-201ENST00000245414 TRAK2O60296 914 aa12.48□□□□□ -0.41
IRF1-201ENST00000245414 C8orf34Q49A92 452 aa12.48□□□□□ -0.41
IRF1-201ENST00000245414 CCDC7Q96M83 1385 aa12.47□□□□□ -0.41
IRF1-201ENST00000245414 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
IRF1-201ENST00000245414 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
IRF1-201ENST00000245414 KTN1Q86UP2 1357 aaKnown RBP12.47□□□□□ -0.41
IRF1-201ENST00000245414 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.41
IRF1-201ENST00000245414 RIPK4P57078 832 aa12.46□□□□□ -0.41
IRF1-201ENST00000245414 NESP48681 1621 aa12.46□□□□□ -0.41
IRF1-201ENST00000245414 MCM4P33991 863 aa12.46□□□□□ -0.42
IRF1-201ENST00000245414 UQCRHLA0A096LP55 91 aa12.45□□□□□ -0.42
IRF1-201ENST00000245414 UQCRHP07919 91 aa12.45□□□□□ -0.42
IRF1-201ENST00000245414 FANCD2Q9BXW9 1451 aa12.45□□□□□ -0.42
IRF1-201ENST00000245414 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
IRF1-201ENST00000245414 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
IRF1-201ENST00000245414 UPF2Q9HAU5 1272 aaKnown RBP12.44□□□□□ -0.42
IRF1-201ENST00000245414 PRXQ9BXM0 1461 aa12.44□□□□□ -0.42
IRF1-201ENST00000245414 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
IRF1-201ENST00000245414 CHIC2Q9UKJ5 165 aa12.43□□□□□ -0.42
IRF1-201ENST00000245414 OFD1O75665 1012 aa12.43□□□□□ -0.42
IRF1-201ENST00000245414 DMTNQ08495 405 aa12.43□□□□□ -0.42
IRF1-201ENST00000245414 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
IRF1-201ENST00000245414 ZSCAN30Q86W11 494 aa12.41□□□□□ -0.42
IRF1-201ENST00000245414 KCNA4P22459 653 aa12.41□□□□□ -0.42
IRF1-201ENST00000245414 FOXD1Q16676 465 aa12.41□□□□□ -0.42
IRF1-201ENST00000245414 RRP7BPQ9NSQ0 103 aa12.41□□□□□ -0.42
IRF1-201ENST00000245414 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
IRF1-201ENST00000245414 ARHGAP35Q9NRY4 1499 aa12.41□□□□□ -0.42
IRF1-201ENST00000245414 PNISRQ8TF01 805 aaKnown RBP12.4□□□□□ -0.42
IRF1-201ENST00000245414 ZBTB7CA1YPR0 619 aa12.4□□□□□ -0.42
IRF1-201ENST00000245414 KIF7Q2M1P5 1343 aa12.4□□□□□ -0.42
IRF1-201ENST00000245414 ERICH3Q5RHP9 1530 aa12.4□□□□□ -0.42
IRF1-201ENST00000245414 CDCA7LQ96GN5 454 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms