RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 HMMRO75330 724 aa11.33□□□□□ -0.6
LRP1-201ENST00000243077 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
LRP1-201ENST00000243077 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
LRP1-201ENST00000243077 KTN1Q86UP2 1357 aaKnown RBP11.33□□□□□ -0.6
LRP1-201ENST00000243077 RGL3Q3MIN7 710 aa11.33□□□□□ -0.6
LRP1-201ENST00000243077 DDX11L8A8MPP1 907 aa11.32□□□□□ -0.6
LRP1-201ENST00000243077 LMOD3Q0VAK6 560 aa11.32□□□□□ -0.6
LRP1-201ENST00000243077 IPO9Q96P70 1041 aaKnown RBP11.32□□□□□ -0.6
LRP1-201ENST00000243077 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
LRP1-201ENST00000243077 SETD5Q9C0A6 1442 aa11.32□□□□□ -0.6
LRP1-201ENST00000243077 ATP6V1DQ9Y5K8 247 aa11.31□□□□□ -0.6
LRP1-201ENST00000243077 GOLGA6L3A6NEY3 463 aa11.31□□□□□ -0.6
LRP1-201ENST00000243077 ANO8Q9HCE9 1232 aaPredicted RBP11.31□□□□□ -0.6
LRP1-201ENST00000243077 RB1CC1Q8TDY2 1594 aa11.31□□□□□ -0.6
LRP1-201ENST00000243077 FRAT1Q92837 279 aaPredicted RBP11.3□□□□□ -0.6
LRP1-201ENST00000243077 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
LRP1-201ENST00000243077 EIF3AQ14152 1382 aaKnown RBP11.3□□□□□ -0.6
LRP1-201ENST00000243077 RGS3P49796 1198 aa11.29□□□□□ -0.6
LRP1-201ENST00000243077 MORC1Q86VD1 984 aa11.29□□□□□ -0.6
LRP1-201ENST00000243077 TNNT3P45378 269 aaPredicted RBP11.29□□□□□ -0.6
LRP1-201ENST00000243077 ST18O60284 1047 aa11.29□□□□□ -0.6
LRP1-201ENST00000243077 B4GALNT3Q6L9W6 998 aa11.28□□□□□ -0.6
LRP1-201ENST00000243077 HDGFL2Q7Z4V5 671 aaPredicted RBP11.28□□□□□ -0.6
LRP1-201ENST00000243077 LAS1LQ9Y4W2 734 aaKnown RBP11.28□□□□□ -0.6
LRP1-201ENST00000243077 MTERF4Q7Z6M4 381 aaKnown RBP11.28□□□□□ -0.6
LRP1-201ENST00000243077 GNL2Q13823 731 aaKnown RBP11.27□□□□□ -0.6
LRP1-201ENST00000243077 LRRFIP1Q32MZ4 808 aaKnown RBP11.27□□□□□ -0.61
LRP1-201ENST00000243077 NLRP13Q86W25 1043 aa11.26□□□□□ -0.61
LRP1-201ENST00000243077 GPS2Q13227 327 aa11.25□□□□□ -0.61
LRP1-201ENST00000243077 SETQ01105 290 aaPredicted RBP11.24□□□□□ -0.61
LRP1-201ENST00000243077 DCAF11Q8TEB1 546 aa11.24□□□□□ -0.61
LRP1-201ENST00000243077 U2SURPO15042 1029 aaKnown RBP11.24□□□□□ -0.61
LRP1-201ENST00000243077 WWC1Q8IX03 1113 aa11.23□□□□□ -0.61
LRP1-201ENST00000243077 HIRIP3Q9BW71 556 aaPredicted RBP11.23□□□□□ -0.61
LRP1-201ENST00000243077 KCNH8Q96L42 1107 aa11.23□□□□□ -0.61
LRP1-201ENST00000243077 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
LRP1-201ENST00000243077 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
LRP1-201ENST00000243077 NPHP1O15259 732 aa11.22□□□□□ -0.61
LRP1-201ENST00000243077 CCDC70Q6NSX1 233 aa11.22□□□□□ -0.61
LRP1-201ENST00000243077 NOC3LQ8WTT2 800 aaKnown RBP11.22□□□□□ -0.61
LRP1-201ENST00000243077 TERF2IPQ9NYB0 399 aa11.22□□□□□ -0.61
LRP1-201ENST00000243077 DHX8Q14562 1220 aaKnown RBP11.21□□□□□ -0.61
LRP1-201ENST00000243077 CC2D1BQ5T0F9 858 aaKnown RBP11.21□□□□□ -0.61
LRP1-201ENST00000243077 MAP7D2Q96T17 732 aa11.21□□□□□ -0.62
LRP1-201ENST00000243077 BAZ1BQ9UIG0 1483 aaKnown RBP11.21□□□□□ -0.62
LRP1-201ENST00000243077 FMN1Q68DA7 1419 aa11.2□□□□□ -0.62
LRP1-201ENST00000243077 CARMIL1Q5VZK9 1371 aa11.2□□□□□ -0.62
LRP1-201ENST00000243077 HSP90AA2PQ14568 343 aaPredicted RBP11.19□□□□□ -0.62
LRP1-201ENST00000243077 TPM3P06753 285 aa11.19□□□□□ -0.62
LRP1-201ENST00000243077 TMX4Q9H1E5 349 aaPredicted RBP11.19□□□□□ -0.62
LRP1-201ENST00000243077 STK31Q9BXU1 1019 aa11.19□□□□□ -0.62
LRP1-201ENST00000243077 NAP1L2Q9ULW6 460 aaPredicted RBP11.19□□□□□ -0.62
LRP1-201ENST00000243077 BAZ1AQ9NRL2 1556 aaPredicted RBP11.19□□□□□ -0.62
LRP1-201ENST00000243077 FANCIQ9NVI1 1328 aa11.19□□□□□ -0.62
LRP1-201ENST00000243077 ARHGAP35Q9NRY4 1499 aa11.18□□□□□ -0.62
LRP1-201ENST00000243077 TEX35Q5T0J7 233 aa11.18□□□□□ -0.62
LRP1-201ENST00000243077 SPAG9O60271 1321 aaKnown RBP11.18□□□□□ -0.62
LRP1-201ENST00000243077 ANKRD30AQ9BXX3 1397 aa11.18□□□□□ -0.62
LRP1-201ENST00000243077 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
LRP1-201ENST00000243077 VPS8Q8N3P4 1428 aa11.18□□□□□ -0.62
LRP1-201ENST00000243077 TPM1P09493 284 aa11.17□□□□□ -0.62
LRP1-201ENST00000243077 HOOK1Q9UJC3 728 aaKnown RBP11.17□□□□□ -0.62
LRP1-201ENST00000243077 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
LRP1-201ENST00000243077 HSPA5P11021 654 aaKnown RBP11.16□□□□□ -0.62
LRP1-201ENST00000243077 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
LRP1-201ENST00000243077 FAM161AQ3B820 660 aa11.16□□□□□ -0.62
LRP1-201ENST00000243077 SRPK2P78362 688 aaKnown RBP11.15□□□□□ -0.62
LRP1-201ENST00000243077 REC8O95072 547 aa11.15□□□□□ -0.62
LRP1-201ENST00000243077 TPM2P07951 284 aa11.15□□□□□ -0.62
LRP1-201ENST00000243077 CARMIL2Q6F5E8 1435 aa11.15□□□□□ -0.63
LRP1-201ENST00000243077 SIN3AQ96ST3 1273 aa11.15□□□□□ -0.63
LRP1-201ENST00000243077 KIF15Q9NS87 1388 aa11.14□□□□□ -0.63
LRP1-201ENST00000243077 E9PSI1 815 aa11.14□□□□□ -0.63
LRP1-201ENST00000243077 U2AF1L5P0DN76 240 aaPredicted RBP11.14□□□□□ -0.63
LRP1-201ENST00000243077 PDIA4P13667 645 aaKnown RBP11.14□□□□□ -0.63
LRP1-201ENST00000243077 U2AF1Q01081 240 aaKnown RBP eCLIP11.14□□□□□ -0.63
LRP1-201ENST00000243077 CGNL1Q0VF96 1302 aa11.14□□□□□ -0.63
LRP1-201ENST00000243077 ITPRIPQ8IWB1 547 aa11.14□□□□□ -0.63
LRP1-201ENST00000243077 ISY1Q9ULR0 285 aaKnown RBP11.14□□□□□ -0.63
LRP1-201ENST00000243077 CENPJQ9HC77 1338 aaPredicted RBP11.13□□□□□ -0.63
LRP1-201ENST00000243077 CPLX2Q6PUV4 134 aaKnown RBP11.13□□□□□ -0.63
LRP1-201ENST00000243077 GOLGA6L19H0YKK7 550 aa11.13□□□□□ -0.63
LRP1-201ENST00000243077 RUFY2Q8WXA3 655 aa11.13□□□□□ -0.63
LRP1-201ENST00000243077 CEP89Q96ST8 783 aa11.12□□□□□ -0.63
LRP1-201ENST00000243077 ZBED9Q6R2W3 1325 aa11.12□□□□□ -0.63
LRP1-201ENST00000243077 NUCB2P80303 420 aa11.12□□□□□ -0.63
LRP1-201ENST00000243077 A0A0G2JS52 829 aa11.12□□□□□ -0.63
LRP1-201ENST00000243077 EFCAB2Q5VUJ9 269 aa11.11□□□□□ -0.63
LRP1-201ENST00000243077 CALRP27797 417 aaKnown RBP11.11□□□□□ -0.63
LRP1-201ENST00000243077 UACAQ9BZF9 1416 aa11.11□□□□□ -0.63
LRP1-201ENST00000243077 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
LRP1-201ENST00000243077 ANKRD20A12PQ8NF67 263 aa11.11□□□□□ -0.63
LRP1-201ENST00000243077 SMC4Q9NTJ3 1288 aa11.11□□□□□ -0.63
LRP1-201ENST00000243077 GSE1Q14687 1217 aa11.11□□□□□ -0.63
LRP1-201ENST00000243077 LETM1O95202 739 aaPredicted RBP11.11□□□□□ -0.63
LRP1-201ENST00000243077 ACBD3Q9H3P7 528 aa11.1□□□□□ -0.63
LRP1-201ENST00000243077 ZBTB7CA1YPR0 619 aa11.1□□□□□ -0.63
LRP1-201ENST00000243077 PKD2Q13563 968 aa11.1□□□□□ -0.63
LRP1-201ENST00000243077 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.1□□□□□ -0.63
LRP1-201ENST00000243077 CDR1P51861 262 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms