RNA–Protein interactions for RNA: ENST00000241001.13

PAX6-201, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-201ENST00000241001 ABCC5O15440 1437 aa18.31■□□□□ 0.52
PAX6-201ENST00000241001 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
PAX6-201ENST00000241001 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
PAX6-201ENST00000241001 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
PAX6-201ENST00000241001 CAMSAP2Q08AD1 1489 aa18.3■□□□□ 0.52
PAX6-201ENST00000241001 GPATCH8Q9UKJ3 1502 aaKnown RBP18.3■□□□□ 0.52
PAX6-201ENST00000241001 PPP1R15AO75807 674 aaPredicted RBP18.29■□□□□ 0.52
PAX6-201ENST00000241001 NEUROD1Q13562 356 aa18.29■□□□□ 0.52
PAX6-201ENST00000241001 KDM6BO15054 1643 aa18.28■□□□□ 0.52
PAX6-201ENST00000241001 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
PAX6-201ENST00000241001 ADGRL2O95490 1459 aa18.27■□□□□ 0.51
PAX6-201ENST00000241001 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
PAX6-201ENST00000241001 ARID3CA6NKF2 412 aa18.26■□□□□ 0.51
PAX6-201ENST00000241001 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
PAX6-201ENST00000241001 ATP10BO94823 1461 aa18.25■□□□□ 0.51
PAX6-201ENST00000241001 ABCC10Q5T3U5 1492 aa18.25■□□□□ 0.51
PAX6-201ENST00000241001 DENND4BO75064 1496 aaPredicted RBP18.23■□□□□ 0.51
PAX6-201ENST00000241001 SHANK2Q9UPX8 1470 aa18.23■□□□□ 0.51
PAX6-201ENST00000241001 CHIC2Q9UKJ5 165 aa18.22■□□□□ 0.51
PAX6-201ENST00000241001 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
PAX6-201ENST00000241001 PTPRGP23470 1445 aa18.21■□□□□ 0.51
PAX6-201ENST00000241001 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
PAX6-201ENST00000241001 CFDP1Q9UEE9 299 aaPredicted RBP18.2■□□□□ 0.5
PAX6-201ENST00000241001 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
PAX6-201ENST00000241001 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
PAX6-201ENST00000241001 NCOA1Q15788 1441 aa18.17■□□□□ 0.5
PAX6-201ENST00000241001 TRIM52Q96A61 297 aa18.15■□□□□ 0.5
PAX6-201ENST00000241001 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
PAX6-201ENST00000241001 PREX2Q70Z35 1606 aa18.15■□□□□ 0.5
PAX6-201ENST00000241001 ZNF644Q9H582 1327 aaPredicted RBP18.15■□□□□ 0.5
PAX6-201ENST00000241001 ERCC6L2Q5T890 1561 aa18.15■□□□□ 0.5
PAX6-201ENST00000241001 ANKRD30AQ9BXX3 1397 aa18.14■□□□□ 0.49
PAX6-201ENST00000241001 ABCC2Q92887 1545 aa18.12■□□□□ 0.49
PAX6-201ENST00000241001 RPRD2Q5VT52 1461 aaKnown RBP18.11■□□□□ 0.49
PAX6-201ENST00000241001 ANKRD30BQ9BXX2 1392 aa18.11■□□□□ 0.49
PAX6-201ENST00000241001 PZPP20742 1482 aa18.09■□□□□ 0.49
PAX6-201ENST00000241001 YTHDC1Q96MU7 727 aaKnown RBP18.09■□□□□ 0.49
PAX6-201ENST00000241001 CDC42BPBQ9Y5S2 1711 aa18.08■□□□□ 0.49
PAX6-201ENST00000241001 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.49
PAX6-201ENST00000241001 C9orf84Q5VXU9 1444 aa18.07■□□□□ 0.48
PAX6-201ENST00000241001 UHRF1BP1LA0JNW5 1464 aa18.06■□□□□ 0.48
PAX6-201ENST00000241001 TEX14Q8IWB6 1497 aa18.06■□□□□ 0.48
PAX6-201ENST00000241001 SAMD9LQ8IVG5 1584 aa18.05■□□□□ 0.48
PAX6-201ENST00000241001 MAST1Q9Y2H9 1570 aa18.05■□□□□ 0.48
PAX6-201ENST00000241001 ANKRD50Q9ULJ7 1429 aa18.05■□□□□ 0.48
PAX6-201ENST00000241001 CCDC141Q6ZP82 1450 aa18.04■□□□□ 0.48
PAX6-201ENST00000241001 RSPH4AQ5TD94 716 aa18.03■□□□□ 0.48
PAX6-201ENST00000241001 GTF3C3Q9Y5Q9 886 aa18.03■□□□□ 0.48
PAX6-201ENST00000241001 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
PAX6-201ENST00000241001 MBD5Q9P267 1494 aa18.03■□□□□ 0.48
PAX6-201ENST00000241001 KIAA1107Q9UPP5 1409 aa18.03■□□□□ 0.48
PAX6-201ENST00000241001 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.48
PAX6-201ENST00000241001 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
PAX6-201ENST00000241001 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
PAX6-201ENST00000241001 TTC37Q6PGP7 1564 aa18.01■□□□□ 0.47
PAX6-201ENST00000241001 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18■□□□□ 0.47
PAX6-201ENST00000241001 ZCCHC11Q5TAX3 1644 aaKnown RBP17.98■□□□□ 0.47
PAX6-201ENST00000241001 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
PAX6-201ENST00000241001 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
PAX6-201ENST00000241001 DDX10Q13206 875 aaKnown RBP17.98■□□□□ 0.47
PAX6-201ENST00000241001 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
PAX6-201ENST00000241001 L3MBTL2Q969R5 705 aa17.96■□□□□ 0.47
PAX6-201ENST00000241001 ARHGAP5Q13017 1502 aa17.96■□□□□ 0.47
PAX6-201ENST00000241001 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
PAX6-201ENST00000241001 POLR1AO95602 1720 aaPredicted RBP17.95■□□□□ 0.46
PAX6-201ENST00000241001 KIF15Q9NS87 1388 aa17.95■□□□□ 0.46
PAX6-201ENST00000241001 SYCP2Q9BX26 1530 aa17.93■□□□□ 0.46
PAX6-201ENST00000241001 ARAP3Q8WWN8 1544 aa17.93■□□□□ 0.46
PAX6-201ENST00000241001 UNC13BO14795 1591 aa17.93■□□□□ 0.46
PAX6-201ENST00000241001 EIF4G2P78344 907 aaKnown RBP eCLIP17.92■□□□□ 0.46
PAX6-201ENST00000241001 ARHGEF12Q9NZN5 1544 aa17.92■□□□□ 0.46
PAX6-201ENST00000241001 FOXD1Q16676 465 aa17.92■□□□□ 0.46
PAX6-201ENST00000241001 ANP32CO43423 234 aa17.91■□□□□ 0.46
PAX6-201ENST00000241001 NUP155O75694 1391 aa17.88■□□□□ 0.45
PAX6-201ENST00000241001 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
PAX6-201ENST00000241001 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
PAX6-201ENST00000241001 PLCH2O75038 1416 aa17.88■□□□□ 0.45
PAX6-201ENST00000241001 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.45
PAX6-201ENST00000241001 PKD2Q13563 968 aa17.86■□□□□ 0.45
PAX6-201ENST00000241001 HIRIP3Q9BW71 556 aaPredicted RBP17.86■□□□□ 0.45
PAX6-201ENST00000241001 UHRF1BP1Q6BDS2 1440 aa17.86■□□□□ 0.45
PAX6-201ENST00000241001 ABCC1P33527 1531 aa17.86■□□□□ 0.45
PAX6-201ENST00000241001 FAM135AQ9P2D6 1515 aa17.86■□□□□ 0.45
PAX6-201ENST00000241001 SPATA31E1Q6ZUB1 1445 aa17.86■□□□□ 0.45
PAX6-201ENST00000241001 DUOX2Q9NRD8 1548 aa17.85■□□□□ 0.45
PAX6-201ENST00000241001 IQGAP3Q86VI3 1631 aa17.84■□□□□ 0.45
PAX6-201ENST00000241001 MAGI2Q86UL8 1455 aa17.83■□□□□ 0.45
PAX6-201ENST00000241001 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
PAX6-201ENST00000241001 ERBINQ96RT1 1412 aa17.82■□□□□ 0.44
PAX6-201ENST00000241001 CNTLNQ9NXG0 1405 aa17.82■□□□□ 0.44
PAX6-201ENST00000241001 NBPF8Q3BBV2 869 aa17.82■□□□□ 0.44
PAX6-201ENST00000241001 RALGAPBQ86X10 1494 aa17.81■□□□□ 0.44
PAX6-201ENST00000241001 CCDC7Q96M83 1385 aa17.8■□□□□ 0.44
PAX6-201ENST00000241001 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
PAX6-201ENST00000241001 WDR7Q9Y4E6 1490 aa17.78■□□□□ 0.44
PAX6-201ENST00000241001 KDM5CP41229 1560 aa17.78■□□□□ 0.44
PAX6-201ENST00000241001 ABCA9Q8IUA7 1624 aa17.77■□□□□ 0.44
PAX6-201ENST00000241001 RTEL1-TNFRSF6BF6WH68 1400 aa17.76■□□□□ 0.43
PAX6-201ENST00000241001 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
PAX6-201ENST00000241001 ATP10AO60312 1499 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms