RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
PTK7-202ENST00000230419 PEG3Q9GZU2 1588 aa22.26■■□□□ 1.15
PTK7-202ENST00000230419 PPP4R2Q9NY27 417 aa22.25■■□□□ 1.15
PTK7-202ENST00000230419 NBPF8Q3BBV2 869 aa22.25■■□□□ 1.15
PTK7-202ENST00000230419 WASHC2AQ641Q2 1341 aa22.24■■□□□ 1.15
PTK7-202ENST00000230419 MLECQ14165 292 aa22.24■■□□□ 1.15
PTK7-202ENST00000230419 ANKRD30AQ9BXX3 1397 aa22.22■■□□□ 1.15
PTK7-202ENST00000230419 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
PTK7-202ENST00000230419 PPM1GO15355 546 aaPredicted RBP22.21■■□□□ 1.15
PTK7-202ENST00000230419 KIF3BO15066 747 aa22.21■■□□□ 1.15
PTK7-202ENST00000230419 PRKRIP1Q9H875 184 aaPredicted RBP22.21■■□□□ 1.15
PTK7-202ENST00000230419 WDR97A6NE52 1622 aa22.21■■□□□ 1.15
PTK7-202ENST00000230419 NEFMP07197 916 aa22.2■■□□□ 1.15
PTK7-202ENST00000230419 TIAM1Q13009 1591 aa22.2■■□□□ 1.14
PTK7-202ENST00000230419 ESF1Q9H501 851 aaKnown RBP22.19■■□□□ 1.14
PTK7-202ENST00000230419 ANP32EQ9BTT0 268 aa22.19■■□□□ 1.14
PTK7-202ENST00000230419 ROCK2O75116 1388 aaKnown RBP22.18■■□□□ 1.14
PTK7-202ENST00000230419 PRG4Q92954 1404 aaPredicted RBP22.18■■□□□ 1.14
PTK7-202ENST00000230419 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
PTK7-202ENST00000230419 STK26Q9P289 416 aa22.16■■□□□ 1.14
PTK7-202ENST00000230419 PTPRGP23470 1445 aa22.15■■□□□ 1.14
PTK7-202ENST00000230419 PRDM2Q13029 1718 aa22.15■■□□□ 1.14
PTK7-202ENST00000230419 C11orf95C9JLR9 678 aaPredicted RBP22.14■■□□□ 1.14
PTK7-202ENST00000230419 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
PTK7-202ENST00000230419 EFCAB2Q5VUJ9 269 aa22.12■■□□□ 1.13
PTK7-202ENST00000230419 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
PTK7-202ENST00000230419 KIF7Q2M1P5 1343 aa22.12■■□□□ 1.13
PTK7-202ENST00000230419 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
PTK7-202ENST00000230419 TMF1P82094 1093 aa22.1■■□□□ 1.13
PTK7-202ENST00000230419 RGS3P49796 1198 aa22.09■■□□□ 1.13
PTK7-202ENST00000230419 ARXQ96QS3 562 aa22.09■■□□□ 1.13
PTK7-202ENST00000230419 FYCO1Q9BQS8 1478 aa22.08■■□□□ 1.13
PTK7-202ENST00000230419 AFAP1Q8N556 730 aa22.08■■□□□ 1.12
PTK7-202ENST00000230419 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.07■■□□□ 1.12
PTK7-202ENST00000230419 USP47Q96K76 1375 aa22.06■■□□□ 1.12
PTK7-202ENST00000230419 CCDC146Q8IYE0 955 aa22.06■■□□□ 1.12
PTK7-202ENST00000230419 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
PTK7-202ENST00000230419 NBPF1Q3BBV0 1214 aa22.06■■□□□ 1.12
PTK7-202ENST00000230419 FRAT1Q92837 279 aaPredicted RBP22.05■■□□□ 1.12
PTK7-202ENST00000230419 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
PTK7-202ENST00000230419 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
PTK7-202ENST00000230419 PLIN1O60240 522 aa22.04■■□□□ 1.12
PTK7-202ENST00000230419 PTPRKQ15262 1439 aa22.04■■□□□ 1.12
PTK7-202ENST00000230419 NAIPQ13075 1403 aa22.04■■□□□ 1.12
PTK7-202ENST00000230419 SPAG9O60271 1321 aaKnown RBP22.03■■□□□ 1.12
PTK7-202ENST00000230419 GRIN2BQ13224 1484 aa22.03■■□□□ 1.12
PTK7-202ENST00000230419 PANK3Q9H999 370 aa22.03■■□□□ 1.12
PTK7-202ENST00000230419 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
PTK7-202ENST00000230419 SOX12O15370 315 aa22.01■■□□□ 1.11
PTK7-202ENST00000230419 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
PTK7-202ENST00000230419 SNAPC4Q5SXM2 1469 aa22■■□□□ 1.11
PTK7-202ENST00000230419 TRAK1Q9UPV9 953 aa22■■□□□ 1.11
PTK7-202ENST00000230419 ARID4BQ4LE39 1312 aaPredicted RBP22■■□□□ 1.11
PTK7-202ENST00000230419 CDCA8Q53HL2 280 aa21.98■■□□□ 1.11
PTK7-202ENST00000230419 CCDC7Q96M83 1385 aa21.98■■□□□ 1.11
PTK7-202ENST00000230419 U2SURPO15042 1029 aaKnown RBP21.98■■□□□ 1.11
PTK7-202ENST00000230419 KIF15Q9NS87 1388 aa21.98■■□□□ 1.11
PTK7-202ENST00000230419 HFM1A2PYH4 1435 aa21.96■■□□□ 1.11
PTK7-202ENST00000230419 KTN1Q86UP2 1357 aaKnown RBP21.95■■□□□ 1.1
PTK7-202ENST00000230419 PLB1Q6P1J6 1458 aa21.95■■□□□ 1.1
PTK7-202ENST00000230419 ANKRD50Q9ULJ7 1429 aa21.95■■□□□ 1.1
PTK7-202ENST00000230419 POGKQ9P215 609 aa21.95■■□□□ 1.1
PTK7-202ENST00000230419 RCAN3Q9UKA8 241 aa21.94■■□□□ 1.1
PTK7-202ENST00000230419 ZBTB7CA1YPR0 619 aa21.93■■□□□ 1.1
PTK7-202ENST00000230419 SRPK2P78362 688 aaKnown RBP21.92■■□□□ 1.1
PTK7-202ENST00000230419 NUDCQ9Y266 331 aa21.92■■□□□ 1.1
PTK7-202ENST00000230419 RRP7AQ9Y3A4 280 aaKnown RBP21.91■■□□□ 1.1
PTK7-202ENST00000230419 CCDC144AA2RUR9 1427 aa21.91■■□□□ 1.1
PTK7-202ENST00000230419 EPRSP07814 1512 aaKnown RBP21.91■■□□□ 1.1
PTK7-202ENST00000230419 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
PTK7-202ENST00000230419 CYB5RLQ6IPT4 315 aa21.9■■□□□ 1.1
PTK7-202ENST00000230419 NUTM2FA1L443 756 aa21.88■■□□□ 1.09
PTK7-202ENST00000230419 UPF2Q9HAU5 1272 aaKnown RBP21.88■■□□□ 1.09
PTK7-202ENST00000230419 MORC1Q86VD1 984 aa21.87■■□□□ 1.09
PTK7-202ENST00000230419 C14orf37Q86TY3 774 aa21.86■■□□□ 1.09
PTK7-202ENST00000230419 NOP58Q9Y2X3 529 aaKnown RBP21.86■■□□□ 1.09
PTK7-202ENST00000230419 NLRP13Q86W25 1043 aa21.86■■□□□ 1.09
PTK7-202ENST00000230419 EFCAB5A4FU69 1503 aa21.85■■□□□ 1.09
PTK7-202ENST00000230419 RALBP1Q15311 655 aa21.85■■□□□ 1.09
PTK7-202ENST00000230419 CFAP53Q96M91 514 aa21.85■■□□□ 1.09
PTK7-202ENST00000230419 HSP90AA1P07900 732 aaKnown RBP21.85■■□□□ 1.09
PTK7-202ENST00000230419 CDCA7LQ96GN5 454 aa21.85■■□□□ 1.09
PTK7-202ENST00000230419 EXOC6Q8TAG9 804 aa21.84■■□□□ 1.09
PTK7-202ENST00000230419 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
PTK7-202ENST00000230419 TMEM132EQ6IEE7 984 aa21.83■■□□□ 1.09
PTK7-202ENST00000230419 WASHC2CQ9Y4E1 1318 aa21.83■■□□□ 1.08
PTK7-202ENST00000230419 KANK1Q14678 1352 aa21.82■■□□□ 1.08
PTK7-202ENST00000230419 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
PTK7-202ENST00000230419 DAPK1P53355 1430 aa21.81■■□□□ 1.08
PTK7-202ENST00000230419 BCL2L13Q9BXK5 485 aa21.8■■□□□ 1.08
PTK7-202ENST00000230419 ZBED9Q6R2W3 1325 aa21.78■■□□□ 1.08
PTK7-202ENST00000230419 FTSJ3Q8IY81 847 aaKnown RBP21.78■■□□□ 1.08
PTK7-202ENST00000230419 CFAP70Q5T0N1 1121 aa21.77■■□□□ 1.08
PTK7-202ENST00000230419 U2AF1L5P0DN76 240 aaPredicted RBP21.77■■□□□ 1.08
PTK7-202ENST00000230419 U2AF1Q01081 240 aaKnown RBP eCLIP21.77■■□□□ 1.08
PTK7-202ENST00000230419 ARHGEF11O15085 1522 aa21.77■■□□□ 1.08
PTK7-202ENST00000230419 CNTLNQ9NXG0 1405 aa21.77■■□□□ 1.08
PTK7-202ENST00000230419 RSPH4AQ5TD94 716 aa21.77■■□□□ 1.07
PTK7-202ENST00000230419 TROQ12816 1431 aaPredicted RBP21.76■■□□□ 1.07
PTK7-202ENST00000230419 ABCC5O15440 1437 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms