RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 LMOD3Q0VAK6 560 aa6.63□□□□□ -1.35
KRR1-201ENST00000229214 HOOK1Q9UJC3 728 aaKnown RBP6.62□□□□□ -1.35
KRR1-201ENST00000229214 KNSTRNQ9Y448 316 aa6.62□□□□□ -1.35
KRR1-201ENST00000229214 PODXL2Q9NZ53 605 aa6.62□□□□□ -1.35
KRR1-201ENST00000229214 CARMIL2Q6F5E8 1435 aa6.61□□□□□ -1.35
KRR1-201ENST00000229214 CEP89Q96ST8 783 aa6.61□□□□□ -1.35
KRR1-201ENST00000229214 ROCK1Q13464 1354 aa6.61□□□□□ -1.35
KRR1-201ENST00000229214 CHIC1Q5VXU3 224 aa6.61□□□□□ -1.35
KRR1-201ENST00000229214 ZRSR2Q15696 482 aaKnown RBP6.61□□□□□ -1.35
KRR1-201ENST00000229214 HOXA7P31268 230 aaPredicted RBP6.61□□□□□ -1.35
KRR1-201ENST00000229214 TPM1P09493 284 aa6.6□□□□□ -1.35
KRR1-201ENST00000229214 ACBD3Q9H3P7 528 aa6.6□□□□□ -1.35
KRR1-201ENST00000229214 SKOR2Q2VWA4 1001 aaPredicted RBP6.6□□□□□ -1.35
KRR1-201ENST00000229214 RBM19Q9Y4C8 960 aaKnown RBP6.6□□□□□ -1.35
KRR1-201ENST00000229214 DCTN1Q14203 1278 aa6.6□□□□□ -1.35
KRR1-201ENST00000229214 PDE3BQ13370 1112 aa6.59□□□□□ -1.35
KRR1-201ENST00000229214 BCL11BQ9C0K0 894 aaPredicted RBP6.59□□□□□ -1.35
KRR1-201ENST00000229214 DNAI2Q9GZS0 605 aa6.59□□□□□ -1.35
KRR1-201ENST00000229214 CCDC7Q96M83 1385 aa6.59□□□□□ -1.35
KRR1-201ENST00000229214 GOLGA2Q08379 1002 aa6.59□□□□□ -1.35
KRR1-201ENST00000229214 PTMAP06454 111 aaKnown RBP6.59□□□□□ -1.35
KRR1-201ENST00000229214 IPO7O95373 1038 aaKnown RBP6.59□□□□□ -1.35
KRR1-201ENST00000229214 TSR1Q2NL82 804 aaKnown RBP6.59□□□□□ -1.35
KRR1-201ENST00000229214 IPO9Q96P70 1041 aaKnown RBP6.59□□□□□ -1.35
KRR1-201ENST00000229214 MAPK8IP3Q9UPT6 1336 aa6.59□□□□□ -1.35
KRR1-201ENST00000229214 PLEKHD1A6NEE1 506 aa6.59□□□□□ -1.35
KRR1-201ENST00000229214 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
KRR1-201ENST00000229214 FTSJ3Q8IY81 847 aaKnown RBP6.59□□□□□ -1.35
KRR1-201ENST00000229214 NEXNQ0ZGT2 675 aa6.58□□□□□ -1.36
KRR1-201ENST00000229214 ANKRD20A12PQ8NF67 263 aa6.58□□□□□ -1.36
KRR1-201ENST00000229214 TCERG1O14776 1098 aaKnown RBP6.58□□□□□ -1.36
KRR1-201ENST00000229214 AEBP1Q8IUX7 1158 aa6.58□□□□□ -1.36
KRR1-201ENST00000229214 WRNQ14191 1432 aaPredicted RBP eCLIP6.58□□□□□ -1.36
KRR1-201ENST00000229214 DNTTIP2Q5QJE6 756 aaKnown RBP6.57□□□□□ -1.36
KRR1-201ENST00000229214 CCDC18Q5T9S5 1454 aa6.57□□□□□ -1.36
KRR1-201ENST00000229214 TPM2P07951 284 aa6.57□□□□□ -1.36
KRR1-201ENST00000229214 CPLX2Q6PUV4 134 aaKnown RBP6.57□□□□□ -1.36
KRR1-201ENST00000229214 HSP90AA2PQ14568 343 aaPredicted RBP6.57□□□□□ -1.36
KRR1-201ENST00000229214 LUC7LQ9NQ29 371 aaKnown RBP6.57□□□□□ -1.36
KRR1-201ENST00000229214 AKNAQ7Z591 1439 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 KIAA1211Q6ZU35 1233 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 U2SURPO15042 1029 aaKnown RBP6.56□□□□□ -1.36
KRR1-201ENST00000229214 DDX11L8A8MPP1 907 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 CCER2I3L3R5 266 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 CCP110O43303 1012 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 PLCD3Q8N3E9 789 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 PIP4K2AP48426 406 aaPredicted RBP6.56□□□□□ -1.36
KRR1-201ENST00000229214 RSPH6AQ9H0K4 717 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 KIF7Q2M1P5 1343 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 TAF3Q5VWG9 929 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 CENPJQ9HC77 1338 aaPredicted RBP6.56□□□□□ -1.36
KRR1-201ENST00000229214 ANKRD30AQ9BXX3 1397 aa6.56□□□□□ -1.36
KRR1-201ENST00000229214 TRIM21P19474 475 aaKnown RBP6.55□□□□□ -1.36
KRR1-201ENST00000229214 SPAG9O60271 1321 aaKnown RBP6.55□□□□□ -1.36
KRR1-201ENST00000229214 WASHC2CQ9Y4E1 1318 aa6.55□□□□□ -1.36
KRR1-201ENST00000229214 POLR3GO15318 223 aaPredicted RBP6.55□□□□□ -1.36
KRR1-201ENST00000229214 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.55□□□□□ -1.36
KRR1-201ENST00000229214 GOLGA4Q13439 2230 aaKnown RBP6.55□□□□□ -1.36
KRR1-201ENST00000229214 FGD1P98174 961 aa6.54□□□□□ -1.36
KRR1-201ENST00000229214 CCDC112Q8NEF3 446 aa6.54□□□□□ -1.36
KRR1-201ENST00000229214 NF2P35240 595 aa6.54□□□□□ -1.36
KRR1-201ENST00000229214 CNPY4Q8N129 248 aa6.54□□□□□ -1.36
KRR1-201ENST00000229214 NAP1L5Q96NT1 182 aaPredicted RBP6.54□□□□□ -1.36
KRR1-201ENST00000229214 TUBB4BP68371 445 aa6.54□□□□□ -1.36
KRR1-201ENST00000229214 HSCBQ8IWL3 235 aa6.54□□□□□ -1.36
KRR1-201ENST00000229214 MAP1BP46821 2468 aaKnown RBP6.54□□□□□ -1.36
KRR1-201ENST00000229214 RALBP1Q15311 655 aa6.54□□□□□ -1.36
KRR1-201ENST00000229214 GOLGA6L7A0A1B0GV03 622 aa6.53□□□□□ -1.36
KRR1-201ENST00000229214 USP8P40818 1118 aa6.53□□□□□ -1.36
KRR1-201ENST00000229214 CCDC173Q0VFZ6 552 aa6.53□□□□□ -1.36
KRR1-201ENST00000229214 TEX35Q5T0J7 233 aa6.53□□□□□ -1.36
KRR1-201ENST00000229214 CCDC47Q96A33 483 aaKnown RBP6.53□□□□□ -1.36
KRR1-201ENST00000229214 ERCC4Q92889 916 aaPredicted RBP6.53□□□□□ -1.36
KRR1-201ENST00000229214 ANKRD18AQ8IVF6 992 aa6.53□□□□□ -1.36
KRR1-201ENST00000229214 CUX1P39880 1505 aa6.53□□□□□ -1.36
KRR1-201ENST00000229214 PES1O00541 588 aaKnown RBP6.52□□□□□ -1.37
KRR1-201ENST00000229214 NOC3LQ8WTT2 800 aaKnown RBP6.52□□□□□ -1.37
KRR1-201ENST00000229214 NINLQ9Y2I6 1382 aa6.52□□□□□ -1.37
KRR1-201ENST00000229214 CWC15Q9P013 229 aaKnown RBP6.52□□□□□ -1.37
KRR1-201ENST00000229214 ERCC6Q03468 1493 aa6.52□□□□□ -1.37
KRR1-201ENST00000229214 PDS5BQ9NTI5 1447 aa6.52□□□□□ -1.37
KRR1-201ENST00000229214 INCENPQ9NQS7 918 aa6.52□□□□□ -1.37
KRR1-201ENST00000229214 RP1L1Q8IWN7 2480 aaPredicted RBP6.52□□□□□ -1.37
KRR1-201ENST00000229214 CCNB3Q8WWL7 1395 aa6.52□□□□□ -1.37
KRR1-201ENST00000229214 AMOTL1Q8IY63 956 aa6.51□□□□□ -1.37
KRR1-201ENST00000229214 PPP1R15AO75807 674 aaPredicted RBP6.51□□□□□ -1.37
KRR1-201ENST00000229214 SCRIBQ14160 1630 aa6.51□□□□□ -1.37
KRR1-201ENST00000229214 DESP17661 470 aa6.51□□□□□ -1.37
KRR1-201ENST00000229214 CHMP7Q8WUX9 453 aaPredicted RBP6.51□□□□□ -1.37
KRR1-201ENST00000229214 CCDC88BA6NC98 1476 aa6.51□□□□□ -1.37
KRR1-201ENST00000229214 PAXIP1Q6ZW49 1069 aaPredicted RBP6.51□□□□□ -1.37
KRR1-201ENST00000229214 TNIKQ9UKE5 1360 aa6.51□□□□□ -1.37
KRR1-201ENST00000229214 PMFBP1Q8TBY8 1022 aa6.51□□□□□ -1.37
KRR1-201ENST00000229214 TNNT3P45378 269 aaPredicted RBP6.5□□□□□ -1.37
KRR1-201ENST00000229214 HNRNPUQ00839 825 aaKnown RBP eCLIP6.5□□□□□ -1.37
KRR1-201ENST00000229214 DDX12PQ92771 950 aa6.5□□□□□ -1.37
KRR1-201ENST00000229214 ITGAEP38570 1179 aa6.5□□□□□ -1.37
KRR1-201ENST00000229214 ST18O60284 1047 aa6.5□□□□□ -1.37
KRR1-201ENST00000229214 ARGLU1Q9NWB6 273 aaPredicted RBP6.5□□□□□ -1.37
KRR1-201ENST00000229214 MCM2P49736 904 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms