RNA–Protein interactions for RNA: ENST00000225844.6

CCL13-201, Transcript of C-C motif chemokine ligand 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL13, Length 851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13-201ENST00000225844 FMN1Q68DA7 1419 aa12.11□□□□□ -0.47
CCL13-201ENST00000225844 ATP10BO94823 1461 aa12.11□□□□□ -0.47
CCL13-201ENST00000225844 CERKQ8TCT0 537 aa12.11□□□□□ -0.47
CCL13-201ENST00000225844 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
CCL13-201ENST00000225844 CEP162Q5TB80 1403 aa12.11□□□□□ -0.47
CCL13-201ENST00000225844 DISP3Q9P2K9 1392 aa12.1□□□□□ -0.47
CCL13-201ENST00000225844 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
CCL13-201ENST00000225844 NEO1Q92859 1461 aa12.09□□□□□ -0.47
CCL13-201ENST00000225844 ARHGAP35Q9NRY4 1499 aa12.09□□□□□ -0.47
CCL13-201ENST00000225844 BCORL1Q5H9F3 1711 aa12.08□□□□□ -0.47
CCL13-201ENST00000225844 MLECQ14165 292 aa12.07□□□□□ -0.48
CCL13-201ENST00000225844 ABCA9Q8IUA7 1624 aa12.07□□□□□ -0.48
CCL13-201ENST00000225844 RANGAP1P46060 587 aaPredicted RBP12.06□□□□□ -0.48
CCL13-201ENST00000225844 ILDR2Q71H61 639 aa12.06□□□□□ -0.48
CCL13-201ENST00000225844 POGZQ7Z3K3 1410 aa12.05□□□□□ -0.48
CCL13-201ENST00000225844 SOCS7O14512 581 aa12.05□□□□□ -0.48
CCL13-201ENST00000225844 RIMS1Q86UR5 1692 aaKnown RBP12.04□□□□□ -0.48
CCL13-201ENST00000225844 DENND4BO75064 1496 aaPredicted RBP12.04□□□□□ -0.48
CCL13-201ENST00000225844 FRMPD1Q5SYB0 1578 aa12.04□□□□□ -0.48
CCL13-201ENST00000225844 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
CCL13-201ENST00000225844 AKNAQ7Z591 1439 aa12.03□□□□□ -0.48
CCL13-201ENST00000225844 ARHGEF40Q8TER5 1519 aa12.02□□□□□ -0.48
CCL13-201ENST00000225844 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
CCL13-201ENST00000225844 FANCAO15360 1455 aa12.02□□□□□ -0.49
CCL13-201ENST00000225844 PLEKHD1A6NEE1 506 aa12.01□□□□□ -0.49
CCL13-201ENST00000225844 CASKIN1Q8WXD9 1431 aa12□□□□□ -0.49
CCL13-201ENST00000225844 CDK11AQ9UQ88 783 aaPredicted RBP11.99□□□□□ -0.49
CCL13-201ENST00000225844 RAPGEF6Q8TEU7 1601 aa11.98□□□□□ -0.49
CCL13-201ENST00000225844 VPS8Q8N3P4 1428 aa11.98□□□□□ -0.49
CCL13-201ENST00000225844 YEATS2Q9ULM3 1422 aa11.98□□□□□ -0.49
CCL13-201ENST00000225844 ZFYVE16Q7Z3T8 1539 aa11.97□□□□□ -0.49
CCL13-201ENST00000225844 FYCO1Q9BQS8 1478 aa11.97□□□□□ -0.49
CCL13-201ENST00000225844 NUP153P49790 1475 aaKnown RBP11.96□□□□□ -0.49
CCL13-201ENST00000225844 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
CCL13-201ENST00000225844 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
CCL13-201ENST00000225844 CCDC18Q5T9S5 1454 aa11.95□□□□□ -0.5
CCL13-201ENST00000225844 CEBPAP49715 358 aaPredicted RBP11.95□□□□□ -0.5
CCL13-201ENST00000225844 HECW1Q76N89 1606 aa11.93□□□□□ -0.5
CCL13-201ENST00000225844 APLP2Q06481 763 aa11.93□□□□□ -0.5
CCL13-201ENST00000225844 MAGI2Q86UL8 1455 aa11.93□□□□□ -0.5
CCL13-201ENST00000225844 MAP3K1Q13233 1512 aa11.92□□□□□ -0.5
CCL13-201ENST00000225844 ZMYM4Q5VZL5 1548 aa11.92□□□□□ -0.5
CCL13-201ENST00000225844 RICTORQ6R327 1708 aa11.92□□□□□ -0.5
CCL13-201ENST00000225844 SCAPERQ9BY12 1400 aa11.92□□□□□ -0.5
CCL13-201ENST00000225844 CFAP74Q9C0B2 1584 aa11.92□□□□□ -0.5
CCL13-201ENST00000225844 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
CCL13-201ENST00000225844 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
CCL13-201ENST00000225844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCL13-201ENST00000225844 UHRF1BP1Q6BDS2 1440 aa11.9□□□□□ -0.5
CCL13-201ENST00000225844 TTC37Q6PGP7 1564 aa11.9□□□□□ -0.5
CCL13-201ENST00000225844 SPATA31D1Q6ZQQ2 1576 aa11.9□□□□□ -0.5
CCL13-201ENST00000225844 SPINK5Q9NQ38 1064 aaPredicted RBP11.9□□□□□ -0.5
CCL13-201ENST00000225844 ATP10AO60312 1499 aa11.89□□□□□ -0.51
CCL13-201ENST00000225844 SIGLEC1Q9BZZ2 1709 aa11.89□□□□□ -0.51
CCL13-201ENST00000225844 C9orf84Q5VXU9 1444 aa11.88□□□□□ -0.51
CCL13-201ENST00000225844 FER1L4A9Z1Z3 1794 aa11.88□□□□□ -0.51
CCL13-201ENST00000225844 ARHGEF12Q9NZN5 1544 aa11.87□□□□□ -0.51
CCL13-201ENST00000225844 EFCAB2Q5VUJ9 269 aa11.87□□□□□ -0.51
CCL13-201ENST00000225844 ESF1Q9H501 851 aaKnown RBP11.87□□□□□ -0.51
CCL13-201ENST00000225844 PLCH2O75038 1416 aa11.86□□□□□ -0.51
CCL13-201ENST00000225844 PREX1Q8TCU6 1659 aa11.85□□□□□ -0.51
CCL13-201ENST00000225844 PTPRTO14522 1441 aa11.84□□□□□ -0.51
CCL13-201ENST00000225844 TROQ12816 1431 aaPredicted RBP11.84□□□□□ -0.51
CCL13-201ENST00000225844 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
CCL13-201ENST00000225844 AFAP1Q8N556 730 aa11.83□□□□□ -0.52
CCL13-201ENST00000225844 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
CCL13-201ENST00000225844 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
CCL13-201ENST00000225844 TIAM1Q13009 1591 aa11.8□□□□□ -0.52
CCL13-201ENST00000225844 STRCQ7RTU9 1775 aa11.8□□□□□ -0.52
CCL13-201ENST00000225844 SAMD1Q6SPF0 538 aaPredicted RBP11.8□□□□□ -0.52
CCL13-201ENST00000225844 ZNF518AQ6AHZ1 1483 aa11.8□□□□□ -0.52
CCL13-201ENST00000225844 LRRC9Q6ZRR7 1453 aa11.79□□□□□ -0.52
CCL13-201ENST00000225844 UBAP1LF5GYI3 381 aa11.79□□□□□ -0.52
CCL13-201ENST00000225844 EHBP1L1Q8N3D4 1523 aa11.78□□□□□ -0.52
CCL13-201ENST00000225844 ARHGAP5Q13017 1502 aa11.77□□□□□ -0.52
CCL13-201ENST00000225844 LTBP4Q8N2S1 1624 aa11.77□□□□□ -0.53
CCL13-201ENST00000225844 TRAPPC8Q9Y2L5 1435 aa11.77□□□□□ -0.53
CCL13-201ENST00000225844 NCOA1Q15788 1441 aa11.76□□□□□ -0.53
CCL13-201ENST00000225844 IQSEC2Q5JU85 1478 aa11.76□□□□□ -0.53
CCL13-201ENST00000225844 CAPN15O75808 1086 aa11.75□□□□□ -0.53
CCL13-201ENST00000225844 KIF14Q15058 1648 aa11.75□□□□□ -0.53
CCL13-201ENST00000225844 KANK4Q5T7N3 995 aaPredicted RBP11.74□□□□□ -0.53
CCL13-201ENST00000225844 ZNF335Q9H4Z2 1342 aaPredicted RBP11.74□□□□□ -0.53
CCL13-201ENST00000225844 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
CCL13-201ENST00000225844 LRRIQ1Q96JM4 1722 aa11.73□□□□□ -0.53
CCL13-201ENST00000225844 DIP2CQ9Y2E4 1556 aa11.73□□□□□ -0.53
CCL13-201ENST00000225844 KDM5CP41229 1560 aa11.72□□□□□ -0.53
CCL13-201ENST00000225844 CCNB3Q8WWL7 1395 aa11.72□□□□□ -0.53
CCL13-201ENST00000225844 MYO5CQ9NQX4 1742 aa11.72□□□□□ -0.53
CCL13-201ENST00000225844 CNTLNQ9NXG0 1405 aa11.71□□□□□ -0.53
CCL13-201ENST00000225844 SETD1BQ9UPS6 1966 aaKnown RBP11.71□□□□□ -0.53
CCL13-201ENST00000225844 C3P01024 1663 aa11.71□□□□□ -0.54
CCL13-201ENST00000225844 CAMSAP1Q5T5Y3 1602 aa11.71□□□□□ -0.54
CCL13-201ENST00000225844 MLH3Q9UHC1 1453 aa11.7□□□□□ -0.54
CCL13-201ENST00000225844 SUPT6HQ7KZ85 1726 aaKnown RBP11.7□□□□□ -0.54
CCL13-201ENST00000225844 RSPH4AQ5TD94 716 aa11.7□□□□□ -0.54
CCL13-201ENST00000225844 NCOA2Q15596 1464 aa11.7□□□□□ -0.54
CCL13-201ENST00000225844 MIA2Q96PC5 1412 aa11.69□□□□□ -0.54
CCL13-201ENST00000225844 ABCA6Q8N139 1617 aa11.69□□□□□ -0.54
CCL13-201ENST00000225844 PIP4K2BP78356 416 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms