RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 ITSN2Q9NZM3 1697 aa21.56■■□□□ 1.04
TGFB1-201ENST00000221930 GCC2Q8IWJ2 1684 aa21.56■■□□□ 1.04
TGFB1-201ENST00000221930 ANP32CO43423 234 aa21.56■■□□□ 1.04
TGFB1-201ENST00000221930 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
TGFB1-201ENST00000221930 CDK11AQ9UQ88 783 aaPredicted RBP21.54■■□□□ 1.04
TGFB1-201ENST00000221930 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
TGFB1-201ENST00000221930 TROQ12816 1431 aaPredicted RBP21.51■■□□□ 1.03
TGFB1-201ENST00000221930 BCANQ96GW7 911 aa21.48■■□□□ 1.03
TGFB1-201ENST00000221930 CCER2I3L3R5 266 aa21.47■■□□□ 1.03
TGFB1-201ENST00000221930 FOXD1Q16676 465 aa21.47■■□□□ 1.03
TGFB1-201ENST00000221930 KDM5BQ9UGL1 1544 aa21.46■■□□□ 1.03
TGFB1-201ENST00000221930 KDM6BO15054 1643 aa21.46■■□□□ 1.03
TGFB1-201ENST00000221930 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
TGFB1-201ENST00000221930 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.03
TGFB1-201ENST00000221930 FKBP8Q14318 412 aa21.43■■□□□ 1.02
TGFB1-201ENST00000221930 PLB1Q6P1J6 1458 aa21.43■■□□□ 1.02
TGFB1-201ENST00000221930 MPHOSPH9Q99550 1183 aa21.42■■□□□ 1.02
TGFB1-201ENST00000221930 ROCK1Q13464 1354 aa21.42■■□□□ 1.02
TGFB1-201ENST00000221930 CLASP1Q7Z460 1538 aa21.41■■□□□ 1.02
TGFB1-201ENST00000221930 KIF14Q15058 1648 aa21.4■■□□□ 1.02
TGFB1-201ENST00000221930 ZNF644Q9H582 1327 aaPredicted RBP21.4■■□□□ 1.02
TGFB1-201ENST00000221930 PRG4Q92954 1404 aaPredicted RBP21.39■■□□□ 1.01
TGFB1-201ENST00000221930 HSPA5P11021 654 aaKnown RBP21.39■■□□□ 1.01
TGFB1-201ENST00000221930 FBLN2P98095 1184 aa21.39■■□□□ 1.01
TGFB1-201ENST00000221930 ADGBQ8N7X0 1667 aa21.37■■□□□ 1.01
TGFB1-201ENST00000221930 CROCC2H7BZ55 1655 aa21.37■■□□□ 1.01
TGFB1-201ENST00000221930 L3MBTL2Q969R5 705 aa21.36■■□□□ 1.01
TGFB1-201ENST00000221930 TSHZ2Q9NRE2 1034 aa21.36■■□□□ 1.01
TGFB1-201ENST00000221930 WASHC2AQ641Q2 1341 aa21.35■■□□□ 1.01
TGFB1-201ENST00000221930 ATP10BO94823 1461 aa21.34■■□□□ 1.01
TGFB1-201ENST00000221930 PTPRGP23470 1445 aa21.33■■□□□ 1
TGFB1-201ENST00000221930 DAPK1P53355 1430 aa21.33■■□□□ 1
TGFB1-201ENST00000221930 CDC42BPAQ5VT25 1732 aa21.32■■□□□ 1
TGFB1-201ENST00000221930 GPATCH8Q9UKJ3 1502 aaKnown RBP21.32■■□□□ 1
TGFB1-201ENST00000221930 ABCC10Q5T3U5 1492 aa21.32■■□□□ 1
TGFB1-201ENST00000221930 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
TGFB1-201ENST00000221930 ADGRL2O95490 1459 aa21.3■■□□□ 1
TGFB1-201ENST00000221930 ABCC5O15440 1437 aa21.29■■□□□ 1
TGFB1-201ENST00000221930 ABCC2Q92887 1545 aa21.28■■□□□ 1
TGFB1-201ENST00000221930 UHRF1BP1LA0JNW5 1464 aa21.28■■□□□ 1
TGFB1-201ENST00000221930 CAMSAP2Q08AD1 1489 aa21.28■■□□□ 1
TGFB1-201ENST00000221930 SHANK2Q9UPX8 1470 aa21.28■■□□□ 1
TGFB1-201ENST00000221930 NEFLP07196 543 aa21.28■■□□□ 1
TGFB1-201ENST00000221930 SLC4A1APQ9BWU0 796 aaKnown RBP21.26■□□□□ 0.99
TGFB1-201ENST00000221930 C11orf95C9JLR9 678 aaPredicted RBP21.25■□□□□ 0.99
TGFB1-201ENST00000221930 HNRNPUQ00839 825 aaKnown RBP eCLIP21.25■□□□□ 0.99
TGFB1-201ENST00000221930 ARHGEF5Q12774 1597 aa21.25■□□□□ 0.99
TGFB1-201ENST00000221930 ANKRD30BQ9BXX2 1392 aa21.24■□□□□ 0.99
TGFB1-201ENST00000221930 NBPF8Q3BBV2 869 aa21.24■□□□□ 0.99
TGFB1-201ENST00000221930 PREX2Q70Z35 1606 aa21.23■□□□□ 0.99
TGFB1-201ENST00000221930 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
TGFB1-201ENST00000221930 ZNF777Q9ULD5 760 aaPredicted RBP21.23■□□□□ 0.99
TGFB1-201ENST00000221930 CFDP1Q9UEE9 299 aaPredicted RBP21.21■□□□□ 0.99
TGFB1-201ENST00000221930 RPRD2Q5VT52 1461 aaKnown RBP21.19■□□□□ 0.98
TGFB1-201ENST00000221930 CCDC184Q52MB2 194 aa21.19■□□□□ 0.98
TGFB1-201ENST00000221930 CNTLNQ9NXG0 1405 aa21.15■□□□□ 0.98
TGFB1-201ENST00000221930 TEX14Q8IWB6 1497 aa21.14■□□□□ 0.97
TGFB1-201ENST00000221930 CCDC7Q96M83 1385 aa21.14■□□□□ 0.97
TGFB1-201ENST00000221930 CDC42BPBQ9Y5S2 1711 aa21.14■□□□□ 0.97
TGFB1-201ENST00000221930 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
TGFB1-201ENST00000221930 MAST1Q9Y2H9 1570 aa21.12■□□□□ 0.97
TGFB1-201ENST00000221930 MYO5CQ9NQX4 1742 aa21.12■□□□□ 0.97
TGFB1-201ENST00000221930 ERCC6L2Q5T890 1561 aa21.11■□□□□ 0.97
TGFB1-201ENST00000221930 IRX6P78412 446 aaPredicted RBP21.11■□□□□ 0.97
TGFB1-201ENST00000221930 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
TGFB1-201ENST00000221930 PLEKHH2Q8IVE3 1493 aa21.1■□□□□ 0.97
TGFB1-201ENST00000221930 ZCCHC11Q5TAX3 1644 aaKnown RBP21.1■□□□□ 0.97
TGFB1-201ENST00000221930 RSPH4AQ5TD94 716 aa21.1■□□□□ 0.97
TGFB1-201ENST00000221930 ARAP3Q8WWN8 1544 aa21.09■□□□□ 0.97
TGFB1-201ENST00000221930 PZPP20742 1482 aa21.09■□□□□ 0.97
TGFB1-201ENST00000221930 ZNF326Q5BKZ1 582 aaKnown RBP21.09■□□□□ 0.97
TGFB1-201ENST00000221930 ANKRD30AQ9BXX3 1397 aa21.08■□□□□ 0.97
TGFB1-201ENST00000221930 FAM9BQ8IZU0 186 aa21.08■□□□□ 0.97
TGFB1-201ENST00000221930 KIF7Q2M1P5 1343 aa21.08■□□□□ 0.97
TGFB1-201ENST00000221930 KDM5DQ9BY66 1539 aa21.08■□□□□ 0.96
TGFB1-201ENST00000221930 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
TGFB1-201ENST00000221930 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.06■□□□□ 0.966e-7■■■□□ 15.5
TGFB1-201ENST00000221930 PKD2Q13563 968 aa21.06■□□□□ 0.96
TGFB1-201ENST00000221930 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
TGFB1-201ENST00000221930 MRS2Q9HD23 443 aa21.05■□□□□ 0.96
TGFB1-201ENST00000221930 SPATA31E1Q6ZUB1 1445 aa21.05■□□□□ 0.96
TGFB1-201ENST00000221930 KIAA1107Q9UPP5 1409 aa21.04■□□□□ 0.96
TGFB1-201ENST00000221930 MBD5Q9P267 1494 aa21.04■□□□□ 0.96
TGFB1-201ENST00000221930 TTC37Q6PGP7 1564 aa21.03■□□□□ 0.96
TGFB1-201ENST00000221930 CCDC141Q6ZP82 1450 aa21.03■□□□□ 0.96
TGFB1-201ENST00000221930 POLR3GLQ9BT43 218 aa21.02■□□□□ 0.96
TGFB1-201ENST00000221930 C9orf84Q5VXU9 1444 aa21.02■□□□□ 0.96
TGFB1-201ENST00000221930 PLXNC1O60486 1568 aa21.01■□□□□ 0.95
TGFB1-201ENST00000221930 ANKRD50Q9ULJ7 1429 aa20.98■□□□□ 0.95
TGFB1-201ENST00000221930 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
TGFB1-201ENST00000221930 NUP155O75694 1391 aa20.95■□□□□ 0.94
TGFB1-201ENST00000221930 USP47Q96K76 1375 aa20.94■□□□□ 0.94
TGFB1-201ENST00000221930 ARHGAP5Q13017 1502 aa20.94■□□□□ 0.94
TGFB1-201ENST00000221930 PLCH2O75038 1416 aa20.94■□□□□ 0.94
TGFB1-201ENST00000221930 HNRNPMP52272 730 aaKnown RBP eCLIP20.93■□□□□ 0.94
TGFB1-201ENST00000221930 TSPY4P0CV99 314 aa20.91■□□□□ 0.94
TGFB1-201ENST00000221930 TSPY10P0CW01 314 aa20.91■□□□□ 0.94
TGFB1-201ENST00000221930 UNC13BO14795 1591 aa20.91■□□□□ 0.94
TGFB1-201ENST00000221930 SYCP2Q9BX26 1530 aa20.89■□□□□ 0.94
TGFB1-201ENST00000221930 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms