RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 GPATCH8Q9UKJ3 1502 aaKnown RBP31.78■■■□□ 2.68
CCDC9-201ENST00000221922 RRP7BPQ9NSQ0 103 aa31.77■■■□□ 2.68
CCDC9-201ENST00000221922 ABCC5O15440 1437 aa31.77■■■□□ 2.68
CCDC9-201ENST00000221922 CHIC2Q9UKJ5 165 aa31.77■■■□□ 2.68
CCDC9-201ENST00000221922 PTPRGP23470 1445 aa31.76■■■□□ 2.67
CCDC9-201ENST00000221922 KDM6BO15054 1643 aa31.74■■■□□ 2.67
CCDC9-201ENST00000221922 CAMSAP2Q08AD1 1489 aa31.74■■■□□ 2.67
CCDC9-201ENST00000221922 PPP1R15AO75807 674 aaPredicted RBP31.71■■■□□ 2.67
CCDC9-201ENST00000221922 ZNF644Q9H582 1327 aaPredicted RBP31.69■■■□□ 2.66
CCDC9-201ENST00000221922 ABCC10Q5T3U5 1492 aa31.69■■■□□ 2.66
CCDC9-201ENST00000221922 PLEKHD1A6NEE1 506 aa31.69■■■□□ 2.66
CCDC9-201ENST00000221922 TONSLQ96HA7 1378 aa31.68■■■□□ 2.66
CCDC9-201ENST00000221922 CDC42BPAQ5VT25 1732 aa31.68■■■□□ 2.66
CCDC9-201ENST00000221922 CFDP1Q9UEE9 299 aaPredicted RBP31.68■■■□□ 2.66
CCDC9-201ENST00000221922 CROCC2H7BZ55 1655 aa31.66■■■□□ 2.66
CCDC9-201ENST00000221922 ADGBQ8N7X0 1667 aa31.66■■■□□ 2.66
CCDC9-201ENST00000221922 DENND4BO75064 1496 aaPredicted RBP31.63■■■□□ 2.65
CCDC9-201ENST00000221922 CLASP1Q7Z460 1538 aa31.6■■■□□ 2.65
CCDC9-201ENST00000221922 ADGRL2O95490 1459 aa31.59■■■□□ 2.65
CCDC9-201ENST00000221922 TRIM52Q96A61 297 aa31.55■■■□□ 2.64
CCDC9-201ENST00000221922 ERCC6L2Q5T890 1561 aa31.54■■■□□ 2.64
CCDC9-201ENST00000221922 NCOA1Q15788 1441 aa31.52■■■□□ 2.64
CCDC9-201ENST00000221922 ABCC2Q92887 1545 aa31.52■■■□□ 2.64
CCDC9-201ENST00000221922 MPHOSPH9Q99550 1183 aa31.5■■■□□ 2.63
CCDC9-201ENST00000221922 SHANK2Q9UPX8 1470 aa31.5■■■□□ 2.63
CCDC9-201ENST00000221922 KDM5BQ9UGL1 1544 aa31.49■■■□□ 2.63
CCDC9-201ENST00000221922 ZNF777Q9ULD5 760 aaPredicted RBP31.47■■■□□ 2.63
CCDC9-201ENST00000221922 PREX2Q70Z35 1606 aa31.46■■■□□ 2.63
CCDC9-201ENST00000221922 ARHGEF5Q12774 1597 aa31.44■■■□□ 2.62
CCDC9-201ENST00000221922 SUPT16HQ9Y5B9 1047 aaKnown RBP31.44■■■□□ 2.62
CCDC9-201ENST00000221922 ANKRD30AQ9BXX3 1397 aa31.43■■■□□ 2.62
CCDC9-201ENST00000221922 CDC42BPBQ9Y5S2 1711 aa31.41■■■□□ 2.62
CCDC9-201ENST00000221922 DDX10Q13206 875 aaKnown RBP31.39■■■□□ 2.62
CCDC9-201ENST00000221922 KCNH8Q96L42 1107 aa31.37■■■□□ 2.61
CCDC9-201ENST00000221922 UHRF1BP1LA0JNW5 1464 aa31.37■■■□□ 2.61
CCDC9-201ENST00000221922 C9orf84Q5VXU9 1444 aa31.36■■■□□ 2.61
CCDC9-201ENST00000221922 SAMD9LQ8IVG5 1584 aa31.35■■■□□ 2.61
CCDC9-201ENST00000221922 ANKRD30BQ9BXX2 1392 aa31.35■■■□□ 2.61
CCDC9-201ENST00000221922 PZPP20742 1482 aa31.35■■■□□ 2.61
CCDC9-201ENST00000221922 TTC37Q6PGP7 1564 aa31.33■■■□□ 2.61
CCDC9-201ENST00000221922 MBD5Q9P267 1494 aa31.33■■■□□ 2.61
CCDC9-201ENST00000221922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.32■■■□□ 2.63e-6■□□□□ 8.9
CCDC9-201ENST00000221922 RPRD2Q5VT52 1461 aaKnown RBP31.31■■■□□ 2.6
CCDC9-201ENST00000221922 ANKRD50Q9ULJ7 1429 aa31.3■■■□□ 2.6
CCDC9-201ENST00000221922 ZCCHC11Q5TAX3 1644 aaKnown RBP31.29■■■□□ 2.6
CCDC9-201ENST00000221922 SLC4A1APQ9BWU0 796 aaKnown RBP31.28■■■□□ 2.6
CCDC9-201ENST00000221922 CCDC141Q6ZP82 1450 aa31.28■■■□□ 2.6
CCDC9-201ENST00000221922 MYO5CQ9NQX4 1742 aa31.28■■■□□ 2.6
CCDC9-201ENST00000221922 TSPY4P0CV99 314 aa31.25■■■□□ 2.59
CCDC9-201ENST00000221922 TSPY10P0CW01 314 aa31.25■■■□□ 2.59
CCDC9-201ENST00000221922 FOXD1Q16676 465 aa31.24■■■□□ 2.59
CCDC9-201ENST00000221922 HIRIP3Q9BW71 556 aaPredicted RBP31.24■■■□□ 2.59
CCDC9-201ENST00000221922 RSPH4AQ5TD94 716 aa31.23■■■□□ 2.59
CCDC9-201ENST00000221922 ARHGAP5Q13017 1502 aa31.22■■■□□ 2.59
CCDC9-201ENST00000221922 CCER2I3L3R5 266 aa31.21■■■□□ 2.59
CCDC9-201ENST00000221922 KDM5DQ9BY66 1539 aa31.21■■■□□ 2.59
CCDC9-201ENST00000221922 MAST1Q9Y2H9 1570 aa31.2■■■□□ 2.59
CCDC9-201ENST00000221922 HNRNPMP52272 730 aaKnown RBP eCLIP31.2■■■□□ 2.59
CCDC9-201ENST00000221922 TEX14Q8IWB6 1497 aa31.2■■■□□ 2.59
CCDC9-201ENST00000221922 KIAA1107Q9UPP5 1409 aa31.19■■■□□ 2.58
CCDC9-201ENST00000221922 PLEKHH2Q8IVE3 1493 aa31.18■■■□□ 2.58
CCDC9-201ENST00000221922 SYCP2Q9BX26 1530 aa31.18■■■□□ 2.58
CCDC9-201ENST00000221922 KIF15Q9NS87 1388 aa31.18■■■□□ 2.58
CCDC9-201ENST00000221922 MYT1Q01538 1121 aa31.15■■■□□ 2.58
CCDC9-201ENST00000221922 L3MBTL2Q969R5 705 aa31.15■■■□□ 2.58
CCDC9-201ENST00000221922 ANP32CO43423 234 aa31.14■■■□□ 2.58
CCDC9-201ENST00000221922 PLCH2O75038 1416 aa31.1■■■□□ 2.57
CCDC9-201ENST00000221922 PLXNC1O60486 1568 aa31.08■■■□□ 2.57
CCDC9-201ENST00000221922 EIF4G2P78344 907 aaKnown RBP eCLIP31.07■■■□□ 2.563e-9■■■■■ 35.8
CCDC9-201ENST00000221922 NUP155O75694 1391 aa31.06■■■□□ 2.56
CCDC9-201ENST00000221922 PKD2Q13563 968 aa31.05■■■□□ 2.56
CCDC9-201ENST00000221922 HSPA5P11021 654 aaKnown RBP31.05■■■□□ 2.56
CCDC9-201ENST00000221922 ARAP3Q8WWN8 1544 aa31.03■■■□□ 2.56
CCDC9-201ENST00000221922 UNC13BO14795 1591 aa30.99■■■□□ 2.55
CCDC9-201ENST00000221922 ABCC1P33527 1531 aa30.99■■■□□ 2.55
CCDC9-201ENST00000221922 ARHGEF12Q9NZN5 1544 aa30.99■■■□□ 2.55
CCDC9-201ENST00000221922 EFCAB2Q5VUJ9 269 aa30.96■■■□□ 2.55
CCDC9-201ENST00000221922 WDR7Q9Y4E6 1490 aa30.95■■■□□ 2.55
CCDC9-201ENST00000221922 FAM135AQ9P2D6 1515 aa30.95■■■□□ 2.54
CCDC9-201ENST00000221922 NBPF8Q3BBV2 869 aa30.94■■■□□ 2.54
CCDC9-201ENST00000221922 WASHC2AQ641Q2 1341 aa30.94■■■□□ 2.54
CCDC9-201ENST00000221922 DUOX2Q9NRD8 1548 aa30.92■■■□□ 2.54
CCDC9-201ENST00000221922 TSHZ2Q9NRE2 1034 aa30.89■■■□□ 2.54
CCDC9-201ENST00000221922 POLR1AO95602 1720 aaPredicted RBP30.89■■■□□ 2.54
CCDC9-201ENST00000221922 ABCA9Q8IUA7 1624 aa30.87■■■□□ 2.53
CCDC9-201ENST00000221922 IQGAP3Q86VI3 1631 aa30.86■■■□□ 2.53
CCDC9-201ENST00000221922 ERBINQ96RT1 1412 aa30.86■■■□□ 2.53
CCDC9-201ENST00000221922 FKBP8Q14318 412 aa30.85■■■□□ 2.53
CCDC9-201ENST00000221922 MAGI2Q86UL8 1455 aa30.84■■■□□ 2.53
CCDC9-201ENST00000221922 SPATA31E1Q6ZUB1 1445 aa30.84■■■□□ 2.53
CCDC9-201ENST00000221922 CNTLNQ9NXG0 1405 aa30.84■■■□□ 2.53
CCDC9-201ENST00000221922 OSCARQ8IYS5 282 aa30.82■■■□□ 2.52
CCDC9-201ENST00000221922 UHRF1BP1Q6BDS2 1440 aa30.82■■■□□ 2.52
CCDC9-201ENST00000221922 TRAPPC8Q9Y2L5 1435 aa30.82■■■□□ 2.52
CCDC9-201ENST00000221922 CCDC7Q96M83 1385 aa30.82■■■□□ 2.52
CCDC9-201ENST00000221922 RTEL1-TNFRSF6BF6WH68 1400 aa30.79■■■□□ 2.52
CCDC9-201ENST00000221922 ZFYVE16Q7Z3T8 1539 aa30.76■■■□□ 2.51
CCDC9-201ENST00000221922 ASXL2Q76L83 1435 aa30.75■■■□□ 2.51
CCDC9-201ENST00000221922 NEFLP07196 543 aa30.75■■■□□ 2.51
CCDC9-201ENST00000221922 FANCAO15360 1455 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms