RNA–Protein interactions for RNA: ENST00000219476.7

TSC2-201, Transcript of TSC complex subunit 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TSC2, Length 6,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-201ENST00000219476 GOLGA6L1Q8N7Z2 621 aa21.02■□□□□ 0.95
TSC2-201ENST00000219476 SRPK2P78362 688 aaKnown RBP21.01■□□□□ 0.95
TSC2-201ENST00000219476 CHMP3Q9Y3E7 222 aa21■□□□□ 0.95
TSC2-201ENST00000219476 CREBRFQ8IUR6 639 aa20.98■□□□□ 0.95
TSC2-201ENST00000219476 WWC1Q8IX03 1113 aa20.97■□□□□ 0.95
TSC2-201ENST00000219476 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
TSC2-201ENST00000219476 APBB1O00213 710 aa20.96■□□□□ 0.95
TSC2-201ENST00000219476 FRAT2O75474 233 aaPredicted RBP20.95■□□□□ 0.94
TSC2-201ENST00000219476 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.94
TSC2-201ENST00000219476 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
TSC2-201ENST00000219476 CTDP1Q9Y5B0 961 aaPredicted RBP20.93■□□□□ 0.94
TSC2-201ENST00000219476 RSF1Q96T23 1441 aaPredicted RBP20.93■□□□□ 0.94
TSC2-201ENST00000219476 GTF2E1P29083 439 aaPredicted RBP20.93■□□□□ 0.94
TSC2-201ENST00000219476 TCEAL9Q9UHQ7 104 aa20.93■□□□□ 0.94
TSC2-201ENST00000219476 KANK1Q14678 1352 aa20.92■□□□□ 0.94
TSC2-201ENST00000219476 CWC22Q9HCG8 908 aaKnown RBP20.92■□□□□ 0.94
TSC2-201ENST00000219476 TNNT3P45378 269 aaPredicted RBP20.91■□□□□ 0.94
TSC2-201ENST00000219476 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
TSC2-201ENST00000219476 GPATCH3Q96I76 525 aa20.91■□□□□ 0.94
TSC2-201ENST00000219476 RTN4Q9NQC3 1192 aaKnown RBP20.91■□□□□ 0.94
TSC2-201ENST00000219476 DCAF8L1A6NGE4 600 aa20.9■□□□□ 0.94
TSC2-201ENST00000219476 MSH5O43196 834 aa20.89■□□□□ 0.93
TSC2-201ENST00000219476 TOMM22Q9NS69 142 aa20.89■□□□□ 0.93
TSC2-201ENST00000219476 TPM3P06753 285 aa20.88■□□□□ 0.93
TSC2-201ENST00000219476 SAFB2Q14151 953 aaKnown RBP eCLIP20.87■□□□□ 0.93
TSC2-201ENST00000219476 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
TSC2-201ENST00000219476 HDGFL2Q7Z4V5 671 aaPredicted RBP20.86■□□□□ 0.93
TSC2-201ENST00000219476 TRIM34Q9BYJ4 488 aa20.85■□□□□ 0.93
TSC2-201ENST00000219476 CHMP4AQ9BY43 222 aa20.84■□□□□ 0.93
TSC2-201ENST00000219476 TMF1P82094 1093 aa20.82■□□□□ 0.92
TSC2-201ENST00000219476 PTMSP20962 102 aa20.82■□□□□ 0.92
TSC2-201ENST00000219476 SYAP1Q96A49 352 aaPredicted RBP20.81■□□□□ 0.92
TSC2-201ENST00000219476 IPO8O15397 1037 aaKnown RBP20.8■□□□□ 0.92
TSC2-201ENST00000219476 PES1O00541 588 aaKnown RBP20.8■□□□□ 0.92
TSC2-201ENST00000219476 CALD1Q05682 793 aaKnown RBP20.79■□□□□ 0.92
TSC2-201ENST00000219476 STK26Q9P289 416 aa20.79■□□□□ 0.92
TSC2-201ENST00000219476 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
TSC2-201ENST00000219476 HDAC5Q9UQL6 1122 aa20.78■□□□□ 0.92
TSC2-201ENST00000219476 RAD21O60216 631 aa20.77■□□□□ 0.92
TSC2-201ENST00000219476 TPD52L1Q16890 204 aaPredicted RBP20.77■□□□□ 0.92
TSC2-201ENST00000219476 STK31Q9BXU1 1019 aa20.77■□□□□ 0.92
TSC2-201ENST00000219476 GBP4Q96PP9 640 aa20.77■□□□□ 0.91
TSC2-201ENST00000219476 SPAG9O60271 1321 aaKnown RBP20.76■□□□□ 0.91
TSC2-201ENST00000219476 TPM2P07951 284 aa20.76■□□□□ 0.91
TSC2-201ENST00000219476 SETQ01105 290 aaPredicted RBP20.76■□□□□ 0.91
TSC2-201ENST00000219476 CSPP1Q1MSJ5 1256 aa20.75■□□□□ 0.91
TSC2-201ENST00000219476 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
TSC2-201ENST00000219476 NOP58Q9Y2X3 529 aaKnown RBP20.75■□□□□ 0.91
TSC2-201ENST00000219476 TSR1Q2NL82 804 aaKnown RBP20.73■□□□□ 0.91
TSC2-201ENST00000219476 NOL10Q9BSC4 688 aaKnown RBP20.73■□□□□ 0.91
TSC2-201ENST00000219476 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■■■■ 103.5
TSC2-201ENST00000219476 KLHL34Q8N239 644 aa20.73■□□□□ 0.91
TSC2-201ENST00000219476 ARID3AQ99856 593 aa20.73■□□□□ 0.91
TSC2-201ENST00000219476 MEX3CQ5U5Q3 659 aaKnown RBP20.73■□□□□ 0.91
TSC2-201ENST00000219476 PATL2C9JE40 543 aaKnown RBP20.72■□□□□ 0.91
TSC2-201ENST00000219476 TRIM6-TRIM34B2RNG4 842 aa20.72■□□□□ 0.91
TSC2-201ENST00000219476 AMOTL1Q8IY63 956 aa20.72■□□□□ 0.91
TSC2-201ENST00000219476 PPP4R2Q9NY27 417 aa20.71■□□□□ 0.91
TSC2-201ENST00000219476 MIER1Q8N108 512 aa20.71■□□□□ 0.91
TSC2-201ENST00000219476 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
TSC2-201ENST00000219476 PHF23Q9BUL5 403 aaPredicted RBP20.69■□□□□ 0.9
TSC2-201ENST00000219476 AKAP17AQ02040 695 aaKnown RBP20.69■□□□□ 0.9
TSC2-201ENST00000219476 SF3A1Q15459 793 aaKnown RBP20.68■□□□□ 0.9
TSC2-201ENST00000219476 ERCC6Q03468 1493 aa20.68■□□□□ 0.9
TSC2-201ENST00000219476 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
TSC2-201ENST00000219476 KIF3AQ9Y496 699 aa20.66■□□□□ 0.9
TSC2-201ENST00000219476 FBXW7Q969H0 707 aa20.66■□□□□ 0.9
TSC2-201ENST00000219476 B4GALNT3Q6L9W6 998 aa20.65■□□□□ 0.9
TSC2-201ENST00000219476 GGT6Q6P531 493 aa20.65■□□□□ 0.9
TSC2-201ENST00000219476 CCDC70Q6NSX1 233 aa20.64■□□□□ 0.89
TSC2-201ENST00000219476 HMMRO75330 724 aa20.64■□□□□ 0.89
TSC2-201ENST00000219476 CCDC43Q96MW1 224 aaKnown RBP20.63■□□□□ 0.89
TSC2-201ENST00000219476 CALRP27797 417 aaKnown RBP20.63■□□□□ 0.89
TSC2-201ENST00000219476 DCAF11Q8TEB1 546 aa20.62■□□□□ 0.89
TSC2-201ENST00000219476 EID1Q9Y6B2 187 aa20.61■□□□□ 0.89
TSC2-201ENST00000219476 TPM1P09493 284 aa20.61■□□□□ 0.89
TSC2-201ENST00000219476 RRP12Q5JTH9 1297 aaKnown RBP20.61■□□□□ 0.89
TSC2-201ENST00000219476 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
TSC2-201ENST00000219476 EVA1CP58658 441 aa20.61■□□□□ 0.89
TSC2-201ENST00000219476 KIF16BQ96L93 1317 aa20.6■□□□□ 0.89
TSC2-201ENST00000219476 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
TSC2-201ENST00000219476 RWDD1Q9H446 243 aaPredicted RBP20.59■□□□□ 0.89
TSC2-201ENST00000219476 SLC4A10Q6U841 1118 aa20.59■□□□□ 0.89
TSC2-201ENST00000219476 SYNE3Q6ZMZ3 975 aa20.59■□□□□ 0.89
TSC2-201ENST00000219476 U2AF1L5P0DN76 240 aaPredicted RBP20.59■□□□□ 0.89
TSC2-201ENST00000219476 U2AF1Q01081 240 aaKnown RBP eCLIP20.59■□□□□ 0.89
TSC2-201ENST00000219476 PCMTD1Q96MG8 357 aaPredicted RBP20.59■□□□□ 0.89
TSC2-201ENST00000219476 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.58■□□□□ 0.89
TSC2-201ENST00000219476 DHX16O60231 1041 aaKnown RBP20.58■□□□□ 0.89
TSC2-201ENST00000219476 NGDNQ8NEJ9 315 aaKnown RBP20.58■□□□□ 0.89
TSC2-201ENST00000219476 CCDC47Q96A33 483 aaKnown RBP20.57■□□□□ 0.88
TSC2-201ENST00000219476 H3BQV1 296 aa20.57■□□□□ 0.88
TSC2-201ENST00000219476 IFFO2Q5TF58 517 aa20.57■□□□□ 0.88
TSC2-201ENST00000219476 CLIP1P30622 1438 aa20.56■□□□□ 0.88
TSC2-201ENST00000219476 GZF1Q9H116 711 aaPredicted RBP20.56■□□□□ 0.88
TSC2-201ENST00000219476 R3HCC1Q9Y3T6 440 aaKnown RBP20.56■□□□□ 0.88
TSC2-201ENST00000219476 AMPHP49418 695 aa20.55■□□□□ 0.88
TSC2-201ENST00000219476 CCAR2Q8N163 923 aaKnown RBP20.55■□□□□ 0.88
TSC2-201ENST00000219476 PAF1Q8N7H5 531 aa20.55■□□□□ 0.88
TSC2-201ENST00000219476 LTV1Q96GA3 475 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms