RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 FYCO1Q9BQS8 1478 aa12.82□□□□□ -0.36
CCDC113-201ENST00000219299 MYOM3Q5VTT5 1437 aa12.82□□□□□ -0.36
CCDC113-201ENST00000219299 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
CCDC113-201ENST00000219299 FGD6Q6ZV73 1430 aa12.81□□□□□ -0.36
CCDC113-201ENST00000219299 TMC1Q8TDI8 760 aa12.81□□□□□ -0.36
CCDC113-201ENST00000219299 NCOA2Q15596 1464 aa12.81□□□□□ -0.36
CCDC113-201ENST00000219299 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
CCDC113-201ENST00000219299 POGKQ9P215 609 aa12.78□□□□□ -0.36
CCDC113-201ENST00000219299 TROQ12816 1431 aaPredicted RBP12.78□□□□□ -0.36
CCDC113-201ENST00000219299 NEFMP07197 916 aa12.77□□□□□ -0.36
CCDC113-201ENST00000219299 WDR62O43379 1518 aa12.77□□□□□ -0.37
CCDC113-201ENST00000219299 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
CCDC113-201ENST00000219299 HDGFP51858 240 aaKnown RBP12.77□□□□□ -0.37
CCDC113-201ENST00000219299 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
CCDC113-201ENST00000219299 RAPGEF3O95398 923 aa12.75□□□□□ -0.37
CCDC113-201ENST00000219299 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
CCDC113-201ENST00000219299 SAFB2Q14151 953 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCDC113-201ENST00000219299 NUTM2DQ5VT03 806 aaPredicted RBP12.75□□□□□ -0.37
CCDC113-201ENST00000219299 KIF15Q9NS87 1388 aa12.74□□□□□ -0.37
CCDC113-201ENST00000219299 EPRSP07814 1512 aaKnown RBP12.74□□□□□ -0.37
CCDC113-201ENST00000219299 ARHGAP5Q13017 1502 aa12.74□□□□□ -0.37
CCDC113-201ENST00000219299 STK26Q9P289 416 aa12.73□□□□□ -0.37
CCDC113-201ENST00000219299 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
CCDC113-201ENST00000219299 L3MBTL2Q969R5 705 aa12.72□□□□□ -0.37
CCDC113-201ENST00000219299 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
CCDC113-201ENST00000219299 EIF4G3O43432 1585 aaKnown RBP12.7□□□□□ -0.38
CCDC113-201ENST00000219299 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
CCDC113-201ENST00000219299 SALL2Q9Y467 1007 aaPredicted RBP12.69□□□□□ -0.38
CCDC113-201ENST00000219299 HECW1Q76N89 1606 aa12.69□□□□□ -0.38
CCDC113-201ENST00000219299 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
CCDC113-201ENST00000219299 ANKRD50Q9ULJ7 1429 aa12.68□□□□□ -0.38
CCDC113-201ENST00000219299 TIAM1Q13009 1591 aa12.67□□□□□ -0.38
CCDC113-201ENST00000219299 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
CCDC113-201ENST00000219299 ZBTB7CA1YPR0 619 aa12.66□□□□□ -0.38
CCDC113-201ENST00000219299 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
CCDC113-201ENST00000219299 DHX57Q6P158 1386 aaKnown RBP12.66□□□□□ -0.38
CCDC113-201ENST00000219299 ARHGEF11O15085 1522 aa12.66□□□□□ -0.38
CCDC113-201ENST00000219299 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
CCDC113-201ENST00000219299 EID1Q9Y6B2 187 aa12.65□□□□□ -0.38
CCDC113-201ENST00000219299 PCF11O94913 1555 aaKnown RBP12.65□□□□□ -0.38
CCDC113-201ENST00000219299 CD109Q6YHK3 1445 aa12.65□□□□□ -0.38
CCDC113-201ENST00000219299 KNSTRNQ9Y448 316 aa12.65□□□□□ -0.39
CCDC113-201ENST00000219299 ADAMTS12P58397 1594 aa12.65□□□□□ -0.39
CCDC113-201ENST00000219299 SRPK2P78362 688 aaKnown RBP12.64□□□□□ -0.39
CCDC113-201ENST00000219299 MIER1Q8N108 512 aa12.64□□□□□ -0.39
CCDC113-201ENST00000219299 CCDC144AA2RUR9 1427 aa12.64□□□□□ -0.39
CCDC113-201ENST00000219299 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
CCDC113-201ENST00000219299 HNRNPUQ00839 825 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC113-201ENST00000219299 TMF1P82094 1093 aa12.63□□□□□ -0.39
CCDC113-201ENST00000219299 HSPA5P11021 654 aaKnown RBP12.62□□□□□ -0.39
CCDC113-201ENST00000219299 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
CCDC113-201ENST00000219299 ANP32AP39687 249 aaKnown RBP12.62□□□□□ -0.39
CCDC113-201ENST00000219299 RRBP1Q9P2E9 1410 aaKnown RBP12.61□□□□□ -0.39
CCDC113-201ENST00000219299 ROCK2O75116 1388 aaKnown RBP12.61□□□□□ -0.39
CCDC113-201ENST00000219299 WDR43Q15061 677 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCDC113-201ENST00000219299 C9orf84Q5VXU9 1444 aa12.61□□□□□ -0.39
CCDC113-201ENST00000219299 NUP160Q12769 1436 aa12.6□□□□□ -0.39
CCDC113-201ENST00000219299 HAP1P54257 671 aaPredicted RBP12.6□□□□□ -0.39
CCDC113-201ENST00000219299 TNNT2P45379 298 aaPredicted RBP12.59□□□□□ -0.39
CCDC113-201ENST00000219299 ATP10BO94823 1461 aa12.58□□□□□ -0.39
CCDC113-201ENST00000219299 PLEKHH2Q8IVE3 1493 aa12.58□□□□□ -0.4
CCDC113-201ENST00000219299 TRAK1Q9UPV9 953 aa12.58□□□□□ -0.4
CCDC113-201ENST00000219299 SENP3-EIF4A1A0A087X0R7 540 aa12.57□□□□□ -0.4
CCDC113-201ENST00000219299 VGFO15240 615 aaPredicted RBP12.57□□□□□ -0.4
CCDC113-201ENST00000219299 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
CCDC113-201ENST00000219299 ABCA5Q8WWZ7 1642 aa12.56□□□□□ -0.4
CCDC113-201ENST00000219299 CANXP27824 592 aaKnown RBP12.56□□□□□ -0.4
CCDC113-201ENST00000219299 CC2D1BQ5T0F9 858 aaKnown RBP12.56□□□□□ -0.4
CCDC113-201ENST00000219299 SOX12O15370 315 aa12.55□□□□□ -0.4
CCDC113-201ENST00000219299 UGGT2Q9NYU1 1516 aa12.55□□□□□ -0.4
CCDC113-201ENST00000219299 SUPT6HQ7KZ85 1726 aaKnown RBP12.55□□□□□ -0.4
CCDC113-201ENST00000219299 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
CCDC113-201ENST00000219299 NUP153P49790 1475 aaKnown RBP12.54□□□□□ -0.4
CCDC113-201ENST00000219299 DAPK1P53355 1430 aa12.54□□□□□ -0.4
CCDC113-201ENST00000219299 ASXL2Q76L83 1435 aa12.54□□□□□ -0.4
CCDC113-201ENST00000219299 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
CCDC113-201ENST00000219299 A0A0G2JS52 829 aa12.52□□□□□ -0.4
CCDC113-201ENST00000219299 THOC2Q8NI27 1593 aaKnown RBP12.52□□□□□ -0.4
CCDC113-201ENST00000219299 ADGRL1O94910 1474 aa12.52□□□□□ -0.41
CCDC113-201ENST00000219299 GLIPR1L2Q4G1C9 344 aa12.52□□□□□ -0.41
CCDC113-201ENST00000219299 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.41
CCDC113-201ENST00000219299 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
CCDC113-201ENST00000219299 FKBP8Q14318 412 aa12.51□□□□□ -0.41
CCDC113-201ENST00000219299 CFAP53Q96M91 514 aa12.51□□□□□ -0.41
CCDC113-201ENST00000219299 BCL11AQ9H165 835 aa12.51□□□□□ -0.41
CCDC113-201ENST00000219299 PBRM1Q86U86 1689 aa12.51□□□□□ -0.41
CCDC113-201ENST00000219299 KIAA0556O60303 1618 aa12.5□□□□□ -0.41
CCDC113-201ENST00000219299 DISP1Q96F81 1524 aa12.5□□□□□ -0.41
CCDC113-201ENST00000219299 MAP3K1Q13233 1512 aa12.49□□□□□ -0.41
CCDC113-201ENST00000219299 FANCAO15360 1455 aa12.49□□□□□ -0.41
CCDC113-201ENST00000219299 KIF14Q15058 1648 aa12.49□□□□□ -0.41
CCDC113-201ENST00000219299 HFM1A2PYH4 1435 aa12.49□□□□□ -0.41
CCDC113-201ENST00000219299 RAPGEF6Q8TEU7 1601 aa12.49□□□□□ -0.41
CCDC113-201ENST00000219299 CCDC141Q6ZP82 1450 aa12.49□□□□□ -0.41
CCDC113-201ENST00000219299 CAMSAP2Q08AD1 1489 aa12.48□□□□□ -0.41
CCDC113-201ENST00000219299 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
CCDC113-201ENST00000219299 ABCC5O15440 1437 aa12.48□□□□□ -0.41
CCDC113-201ENST00000219299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCDC113-201ENST00000219299 CTTNBP2Q8WZ74 1663 aa12.47□□□□□ -0.41
CCDC113-201ENST00000219299 GPATCH8Q9UKJ3 1502 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms