RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 FYCO1Q9BQS8 1478 aa27.27■■□□□ 1.96
FMR1-201ENST00000218200 ABCA10Q8WWZ4 1543 aa27.27■■□□□ 1.96
FMR1-201ENST00000218200 TPRNQ4KMQ1 711 aa27.27■■□□□ 1.96
FMR1-201ENST00000218200 L3MBTL2Q969R5 705 aa27.26■■□□□ 1.95
FMR1-201ENST00000218200 DDRGK1Q96HY6 314 aa27.26■■□□□ 1.95
FMR1-201ENST00000218200 TNNT2P45379 298 aaPredicted RBP27.26■■□□□ 1.95
FMR1-201ENST00000218200 JPH4Q96JJ6 628 aa27.26■■□□□ 1.95
FMR1-201ENST00000218200 CCER2I3L3R5 266 aa27.25■■□□□ 1.95
FMR1-201ENST00000218200 CARMIL2Q6F5E8 1435 aa27.25■■□□□ 1.95
FMR1-201ENST00000218200 FRAT1Q92837 279 aaPredicted RBP27.25■■□□□ 1.95
FMR1-201ENST00000218200 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
FMR1-201ENST00000218200 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.24■■□□□ 1.95
FMR1-201ENST00000218200 PPM1GO15355 546 aaPredicted RBP27.23■■□□□ 1.95
FMR1-201ENST00000218200 PKD2Q13563 968 aa27.22■■□□□ 1.95
FMR1-201ENST00000218200 STAG3Q9UJ98 1225 aa27.21■■□□□ 1.95
FMR1-201ENST00000218200 NCOA2Q15596 1464 aa27.2■■□□□ 1.94
FMR1-201ENST00000218200 EFCAB5A4FU69 1503 aa27.19■■□□□ 1.94
FMR1-201ENST00000218200 BECN1Q14457 450 aa27.17■■□□□ 1.94
FMR1-201ENST00000218200 SPRYD3Q8NCJ5 442 aa27.17■■□□□ 1.94
FMR1-201ENST00000218200 PLEKHG5O94827 1062 aa27.16■■□□□ 1.94
FMR1-201ENST00000218200 NCLP19338 710 aaKnown RBP27.16■■□□□ 1.94
FMR1-201ENST00000218200 KNSTRNQ9Y448 316 aa27.15■■□□□ 1.94
FMR1-201ENST00000218200 TRIM44Q96DX7 344 aaPredicted RBP27.15■■□□□ 1.94
FMR1-201ENST00000218200 ZNF644Q9H582 1327 aaPredicted RBP27.14■■□□□ 1.94
FMR1-201ENST00000218200 ARID4BQ4LE39 1312 aaPredicted RBP27.13■■□□□ 1.93
FMR1-201ENST00000218200 NAP1L5Q96NT1 182 aaPredicted RBP27.1■■□□□ 1.93
FMR1-201ENST00000218200 UACAQ9BZF9 1416 aa27.1■■□□□ 1.93
FMR1-201ENST00000218200 PCF11O94913 1555 aaKnown RBP27.1■■□□□ 1.93
FMR1-201ENST00000218200 DCAF11Q8TEB1 546 aa27.1■■□□□ 1.93
FMR1-201ENST00000218200 NPM1P06748 294 aaKnown RBP eCLIP27.07■■□□□ 1.92
FMR1-201ENST00000218200 GRIN2BQ13224 1484 aa27.07■■□□□ 1.92
FMR1-201ENST00000218200 URB2Q14146 1524 aaKnown RBP27.06■■□□□ 1.92
FMR1-201ENST00000218200 NUP155O75694 1391 aa27.06■■□□□ 1.92
FMR1-201ENST00000218200 ANKRD30AQ9BXX3 1397 aa27.05■■□□□ 1.92
FMR1-201ENST00000218200 HNRNPMP52272 730 aaKnown RBP eCLIP27.05■■□□□ 1.92
FMR1-201ENST00000218200 ERICH6BQ5W0A0 696 aa27.04■■□□□ 1.92
FMR1-201ENST00000218200 LAMC3Q9Y6N6 1575 aa27.04■■□□□ 1.92
FMR1-201ENST00000218200 MAP3K1Q13233 1512 aa27.03■■□□□ 1.92
FMR1-201ENST00000218200 FTSJ3Q8IY81 847 aaKnown RBP26.98■■□□□ 1.91
FMR1-201ENST00000218200 SLKQ9H2G2 1235 aaPredicted RBP26.98■■□□□ 1.91
FMR1-201ENST00000218200 MRC2Q9UBG0 1479 aa26.98■■□□□ 1.91
FMR1-201ENST00000218200 HFM1A2PYH4 1435 aa26.94■■□□□ 1.9
FMR1-201ENST00000218200 CUL7Q14999 1698 aa26.94■■□□□ 1.9
FMR1-201ENST00000218200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.94■■□□□ 1.9
FMR1-201ENST00000218200 GZF1Q9H116 711 aaPredicted RBP26.93■■□□□ 1.9
FMR1-201ENST00000218200 MYH16Q9H6N6 1097 aa26.93■■□□□ 1.9
FMR1-201ENST00000218200 SLC4A3P48751 1232 aa26.92■■□□□ 1.9
FMR1-201ENST00000218200 RCAN3Q9UKA8 241 aa26.91■■□□□ 1.9
FMR1-201ENST00000218200 WDR97A6NE52 1622 aa26.89■■□□□ 1.9
FMR1-201ENST00000218200 EHBP1L1Q8N3D4 1523 aa26.89■■□□□ 1.89
FMR1-201ENST00000218200 PRDM2Q13029 1718 aa26.88■■□□□ 1.89
FMR1-201ENST00000218200 ESF1Q9H501 851 aaKnown RBP26.86■■□□□ 1.89
FMR1-201ENST00000218200 NAIPQ13075 1403 aa26.86■■□□□ 1.89
FMR1-201ENST00000218200 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
FMR1-201ENST00000218200 IPO9Q96P70 1041 aaKnown RBP26.85■■□□□ 1.89
FMR1-201ENST00000218200 PTPRGP23470 1445 aa26.85■■□□□ 1.89
FMR1-201ENST00000218200 U2SURPO15042 1029 aaKnown RBP26.84■■□□□ 1.89
FMR1-201ENST00000218200 GOLGA6L22H0YM25 854 aa26.84■■□□□ 1.89
FMR1-201ENST00000218200 ZBTB7CA1YPR0 619 aa26.83■■□□□ 1.89
FMR1-201ENST00000218200 PLCB2Q00722 1185 aa26.83■■□□□ 1.89
FMR1-201ENST00000218200 PTMAP06454 111 aaKnown RBP26.82■■□□□ 1.88
FMR1-201ENST00000218200 CDK13Q14004 1512 aaKnown RBP26.82■■□□□ 1.88
FMR1-201ENST00000218200 DNTTIP2Q5QJE6 756 aaKnown RBP26.81■■□□□ 1.88
FMR1-201ENST00000218200 EPRSP07814 1512 aaKnown RBP26.8■■□□□ 1.88
FMR1-201ENST00000218200 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
FMR1-201ENST00000218200 PLIN1O60240 522 aa26.8■■□□□ 1.88
FMR1-201ENST00000218200 MIA2Q96PC5 1412 aa26.77■■□□□ 1.88
FMR1-201ENST00000218200 CFAP53Q96M91 514 aa26.77■■□□□ 1.88
FMR1-201ENST00000218200 ARID3AQ99856 593 aa26.77■■□□□ 1.88
FMR1-201ENST00000218200 NUDCQ9Y266 331 aa26.77■■□□□ 1.88
FMR1-201ENST00000218200 SUPT6HQ7KZ85 1726 aaKnown RBP26.77■■□□□ 1.88
FMR1-201ENST00000218200 EFCAB2Q5VUJ9 269 aa26.76■■□□□ 1.88
FMR1-201ENST00000218200 PRKRIP1Q9H875 184 aaPredicted RBP26.76■■□□□ 1.88
FMR1-201ENST00000218200 PRG4Q92954 1404 aaPredicted RBP26.76■■□□□ 1.88
FMR1-201ENST00000218200 WASHC2AQ641Q2 1341 aa26.76■■□□□ 1.87
FMR1-201ENST00000218200 SAFB2Q14151 953 aaKnown RBP eCLIP26.76■■□□□ 1.87
FMR1-201ENST00000218200 IQGAP2Q13576 1575 aa26.75■■□□□ 1.87
FMR1-201ENST00000218200 RSPH4AQ5TD94 716 aa26.74■■□□□ 1.87
FMR1-201ENST00000218200 HECW1Q76N89 1606 aa26.74■■□□□ 1.87
FMR1-201ENST00000218200 ROCK2O75116 1388 aaKnown RBP26.73■■□□□ 1.87
FMR1-201ENST00000218200 HSP90AB1P08238 724 aaKnown RBP26.73■■□□□ 1.87
FMR1-201ENST00000218200 KIAA0586Q9BVV6 1533 aa26.72■■□□□ 1.87
FMR1-201ENST00000218200 CLUAP1Q96AJ1 413 aa26.71■■□□□ 1.87
FMR1-201ENST00000218200 ST20-MTHFSA0A0A6YYL1 179 aa26.7■■□□□ 1.87
FMR1-201ENST00000218200 MAPKBP1O60336 1514 aa26.7■■□□□ 1.87
FMR1-201ENST00000218200 CDCA8Q53HL2 280 aa26.7■■□□□ 1.86
FMR1-201ENST00000218200 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.86
FMR1-201ENST00000218200 TCERG1O14776 1098 aaKnown RBP26.69■■□□□ 1.86
FMR1-201ENST00000218200 TMF1P82094 1093 aa26.69■■□□□ 1.86
FMR1-201ENST00000218200 PTPRKQ15262 1439 aa26.69■■□□□ 1.86
FMR1-201ENST00000218200 TAOK2Q9UL54 1235 aa26.69■■□□□ 1.86
FMR1-201ENST00000218200 EXOC6Q8TAG9 804 aa26.68■■□□□ 1.86
FMR1-201ENST00000218200 APBB1O00213 710 aa26.67■■□□□ 1.86
FMR1-201ENST00000218200 NBPF8Q3BBV2 869 aa26.67■■□□□ 1.86
FMR1-201ENST00000218200 C14orf37Q86TY3 774 aa26.67■■□□□ 1.86
FMR1-201ENST00000218200 MAPK8IP3Q9UPT6 1336 aa26.67■■□□□ 1.86
FMR1-201ENST00000218200 ANKRD50Q9ULJ7 1429 aa26.66■■□□□ 1.86
FMR1-201ENST00000218200 USP47Q96K76 1375 aa26.66■■□□□ 1.86
FMR1-201ENST00000218200 CCDC146Q8IYE0 955 aa26.66■■□□□ 1.86
FMR1-201ENST00000218200 TROQ12816 1431 aaPredicted RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms