RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 NAIPQ13075 1403 aa22.28■■□□□ 1.16
SNAPC1-201ENST00000216294 FOXD1Q16676 465 aa22.27■■□□□ 1.16
SNAPC1-201ENST00000216294 TROQ12816 1431 aaPredicted RBP22.26■■□□□ 1.15
SNAPC1-201ENST00000216294 ABCA8O94911 1581 aa22.24■■□□□ 1.15
SNAPC1-201ENST00000216294 ZNF644Q9H582 1327 aaPredicted RBP22.23■■□□□ 1.15
SNAPC1-201ENST00000216294 NEFLP07196 543 aa22.22■■□□□ 1.15
SNAPC1-201ENST00000216294 TIMELESSQ9UNS1 1208 aa22.22■■□□□ 1.15
SNAPC1-201ENST00000216294 KIF14Q15058 1648 aa22.2■■□□□ 1.14
SNAPC1-201ENST00000216294 PTPRGP23470 1445 aa22.19■■□□□ 1.14
SNAPC1-201ENST00000216294 CCER2I3L3R5 266 aa22.19■■□□□ 1.14
SNAPC1-201ENST00000216294 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
SNAPC1-201ENST00000216294 UACAQ9BZF9 1416 aa22.18■■□□□ 1.14
SNAPC1-201ENST00000216294 ATP10BO94823 1461 aa22.18■■□□□ 1.14
SNAPC1-201ENST00000216294 CCDC184Q52MB2 194 aa22.17■■□□□ 1.14
SNAPC1-201ENST00000216294 CNGB1Q14028 1251 aaPredicted RBP22.17■■□□□ 1.14
SNAPC1-201ENST00000216294 HSPA5P11021 654 aaKnown RBP22.15■■□□□ 1.14
SNAPC1-201ENST00000216294 DAPK1P53355 1430 aa22.15■■□□□ 1.14
SNAPC1-201ENST00000216294 ANP32EQ9BTT0 268 aa22.14■■□□□ 1.14
SNAPC1-201ENST00000216294 RBM19Q9Y4C8 960 aaKnown RBP22.14■■□□□ 1.14
SNAPC1-201ENST00000216294 WASHC2AQ641Q2 1341 aa22.13■■□□□ 1.13
SNAPC1-201ENST00000216294 GPATCH8Q9UKJ3 1502 aaKnown RBP22.13■■□□□ 1.13
SNAPC1-201ENST00000216294 KDM6BO15054 1643 aa22.13■■□□□ 1.13
SNAPC1-201ENST00000216294 PLEKHD1A6NEE1 506 aa22.13■■□□□ 1.13
SNAPC1-201ENST00000216294 CFDP1Q9UEE9 299 aaPredicted RBP22.13■■□□□ 1.13
SNAPC1-201ENST00000216294 ABCC5O15440 1437 aa22.12■■□□□ 1.13
SNAPC1-201ENST00000216294 ADCY10Q96PN6 1610 aa22.12■■□□□ 1.13
SNAPC1-201ENST00000216294 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
SNAPC1-201ENST00000216294 GCC2Q8IWJ2 1684 aa22.12■■□□□ 1.13
SNAPC1-201ENST00000216294 SHROOM2Q13796 1616 aa22.12■■□□□ 1.13
SNAPC1-201ENST00000216294 KDM5BQ9UGL1 1544 aa22.11■■□□□ 1.13
SNAPC1-201ENST00000216294 AKNAQ7Z591 1439 aa22.11■■□□□ 1.13
SNAPC1-201ENST00000216294 ZNF777Q9ULD5 760 aaPredicted RBP22.11■■□□□ 1.13
SNAPC1-201ENST00000216294 DNMT1P26358 1616 aaKnown RBP22.1■■□□□ 1.13
SNAPC1-201ENST00000216294 C11orf95C9JLR9 678 aaPredicted RBP22.1■■□□□ 1.13
SNAPC1-201ENST00000216294 CAMSAP2Q08AD1 1489 aa22.1■■□□□ 1.13
SNAPC1-201ENST00000216294 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.12
SNAPC1-201ENST00000216294 DENND4BO75064 1496 aaPredicted RBP22.07■■□□□ 1.12
SNAPC1-201ENST00000216294 ITSN2Q9NZM3 1697 aa22.07■■□□□ 1.12
SNAPC1-201ENST00000216294 L3MBTL2Q969R5 705 aa22.04■■□□□ 1.12
SNAPC1-201ENST00000216294 ABCC10Q5T3U5 1492 aa22.04■■□□□ 1.12
SNAPC1-201ENST00000216294 ROCK1Q13464 1354 aa22.03■■□□□ 1.12
SNAPC1-201ENST00000216294 FAM9BQ8IZU0 186 aa22.02■■□□□ 1.12
SNAPC1-201ENST00000216294 CLASP1Q7Z460 1538 aa22.01■■□□□ 1.11
SNAPC1-201ENST00000216294 MPHOSPH9Q99550 1183 aa22.01■■□□□ 1.11
SNAPC1-201ENST00000216294 CDC42BPAQ5VT25 1732 aa21.99■■□□□ 1.11
SNAPC1-201ENST00000216294 EIF4G2P78344 907 aaKnown RBP eCLIP21.96■■□□□ 1.11
SNAPC1-201ENST00000216294 NBPF8Q3BBV2 869 aa21.96■■□□□ 1.11
SNAPC1-201ENST00000216294 MSH5O43196 834 aa21.94■■□□□ 1.1
SNAPC1-201ENST00000216294 ABCC2Q92887 1545 aa21.94■■□□□ 1.1
SNAPC1-201ENST00000216294 POLR3GLQ9BT43 218 aa21.93■■□□□ 1.1
SNAPC1-201ENST00000216294 NCOA1Q15788 1441 aa21.92■■□□□ 1.1
SNAPC1-201ENST00000216294 CROCC2H7BZ55 1655 aa21.91■■□□□ 1.1
SNAPC1-201ENST00000216294 ZNF326Q5BKZ1 582 aaKnown RBP21.89■■□□□ 1.09
SNAPC1-201ENST00000216294 ADGRL2O95490 1459 aa21.88■■□□□ 1.09
SNAPC1-201ENST00000216294 ADGBQ8N7X0 1667 aa21.88■■□□□ 1.09
SNAPC1-201ENST00000216294 HNRNPMP52272 730 aaKnown RBP eCLIP21.87■■□□□ 1.09
SNAPC1-201ENST00000216294 MRS2Q9HD23 443 aa21.87■■□□□ 1.09
SNAPC1-201ENST00000216294 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
SNAPC1-201ENST00000216294 PRKRIP1Q9H875 184 aaPredicted RBP21.85■■□□□ 1.09
SNAPC1-201ENST00000216294 TTC37Q6PGP7 1564 aa21.85■■□□□ 1.09
SNAPC1-201ENST00000216294 C9orf84Q5VXU9 1444 aa21.85■■□□□ 1.09
SNAPC1-201ENST00000216294 B4GALNT3Q6L9W6 998 aa21.83■■□□□ 1.09
SNAPC1-201ENST00000216294 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.09
SNAPC1-201ENST00000216294 PREX2Q70Z35 1606 aa21.83■■□□□ 1.09
SNAPC1-201ENST00000216294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.83■■□□□ 1.09
SNAPC1-201ENST00000216294 CNTLNQ9NXG0 1405 aa21.83■■□□□ 1.08
SNAPC1-201ENST00000216294 CDC42BPBQ9Y5S2 1711 aa21.82■■□□□ 1.08
SNAPC1-201ENST00000216294 CCDC7Q96M83 1385 aa21.82■■□□□ 1.08
SNAPC1-201ENST00000216294 SAMD9LQ8IVG5 1584 aa21.82■■□□□ 1.08
SNAPC1-201ENST00000216294 SHANK2Q9UPX8 1470 aa21.81■■□□□ 1.08
SNAPC1-201ENST00000216294 MBD5Q9P267 1494 aa21.81■■□□□ 1.08
SNAPC1-201ENST00000216294 ZCCHC11Q5TAX3 1644 aaKnown RBP21.8■■□□□ 1.08
SNAPC1-201ENST00000216294 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
SNAPC1-201ENST00000216294 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
SNAPC1-201ENST00000216294 PZPP20742 1482 aa21.8■■□□□ 1.08
SNAPC1-201ENST00000216294 ANKRD50Q9ULJ7 1429 aa21.79■■□□□ 1.08
SNAPC1-201ENST00000216294 KIF7Q2M1P5 1343 aa21.79■■□□□ 1.08
SNAPC1-201ENST00000216294 ANKRD30BQ9BXX2 1392 aa21.78■■□□□ 1.08
SNAPC1-201ENST00000216294 UHRF1BP1LA0JNW5 1464 aa21.78■■□□□ 1.08
SNAPC1-201ENST00000216294 ARHGAP5Q13017 1502 aa21.78■■□□□ 1.08
SNAPC1-201ENST00000216294 ARHGEF5Q12774 1597 aa21.77■■□□□ 1.07
SNAPC1-201ENST00000216294 SYCP2Q9BX26 1530 aa21.75■■□□□ 1.07
SNAPC1-201ENST00000216294 CCDC141Q6ZP82 1450 aa21.75■■□□□ 1.07
SNAPC1-201ENST00000216294 KIF15Q9NS87 1388 aa21.74■■□□□ 1.07
SNAPC1-201ENST00000216294 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
SNAPC1-201ENST00000216294 MYO5CQ9NQX4 1742 aa21.7■■□□□ 1.06
SNAPC1-201ENST00000216294 TEX14Q8IWB6 1497 aa21.69■■□□□ 1.06
SNAPC1-201ENST00000216294 PKD2Q13563 968 aa21.69■■□□□ 1.06
SNAPC1-201ENST00000216294 NUP155O75694 1391 aa21.68■■□□□ 1.06
SNAPC1-201ENST00000216294 KIAA1107Q9UPP5 1409 aa21.67■■□□□ 1.06
SNAPC1-201ENST00000216294 PPP4R2Q9NY27 417 aa21.67■■□□□ 1.06
SNAPC1-201ENST00000216294 RSPH4AQ5TD94 716 aa21.65■■□□□ 1.06
SNAPC1-201ENST00000216294 PLCH2O75038 1416 aa21.65■■□□□ 1.06
SNAPC1-201ENST00000216294 ARHGEF12Q9NZN5 1544 aa21.65■■□□□ 1.06
SNAPC1-201ENST00000216294 SPATA31E1Q6ZUB1 1445 aa21.63■■□□□ 1.05
SNAPC1-201ENST00000216294 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
SNAPC1-201ENST00000216294 ZBED9Q6R2W3 1325 aa21.62■■□□□ 1.05
SNAPC1-201ENST00000216294 BCL11AQ9H165 835 aa21.62■■□□□ 1.05
SNAPC1-201ENST00000216294 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
SNAPC1-201ENST00000216294 PLEKHH2Q8IVE3 1493 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms