RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
DNMT3B-201ENST00000201963 GLIPR1L2Q4G1C9 344 aa15.35■□□□□ 0.05
DNMT3B-201ENST00000201963 C14orf37Q86TY3 774 aa15.35■□□□□ 0.05
DNMT3B-201ENST00000201963 VPS8Q8N3P4 1428 aa15.35■□□□□ 0.05
DNMT3B-201ENST00000201963 SPAG9O60271 1321 aaKnown RBP15.34■□□□□ 0.05
DNMT3B-201ENST00000201963 WDR62O43379 1518 aa15.33■□□□□ 0.05
DNMT3B-201ENST00000201963 RAPGEF3O95398 923 aa15.32■□□□□ 0.04
DNMT3B-201ENST00000201963 KIAA0586Q9BVV6 1533 aa15.32■□□□□ 0.04
DNMT3B-201ENST00000201963 AFAP1Q8N556 730 aa15.31■□□□□ 0.04
DNMT3B-201ENST00000201963 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
DNMT3B-201ENST00000201963 PPM1GO15355 546 aaPredicted RBP15.29■□□□□ 0.04
DNMT3B-201ENST00000201963 DNAJC5Q9H3Z4 198 aa15.29■□□□□ 0.04
DNMT3B-201ENST00000201963 PRXQ9BXM0 1461 aa15.27■□□□□ 0.04
DNMT3B-201ENST00000201963 EIF4G3O43432 1585 aaKnown RBP15.27■□□□□ 0.03
DNMT3B-201ENST00000201963 DDRGK1Q96HY6 314 aa15.26■□□□□ 0.03
DNMT3B-201ENST00000201963 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
DNMT3B-201ENST00000201963 PLB1Q6P1J6 1458 aa15.25■□□□□ 0.03
DNMT3B-201ENST00000201963 UPF2Q9HAU5 1272 aaKnown RBP15.25■□□□□ 0.03
DNMT3B-201ENST00000201963 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
DNMT3B-201ENST00000201963 CCDC18Q5T9S5 1454 aa15.24■□□□□ 0.03
DNMT3B-201ENST00000201963 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
DNMT3B-201ENST00000201963 UACAQ9BZF9 1416 aa15.23■□□□□ 0.03
DNMT3B-201ENST00000201963 WASHC2CQ9Y4E1 1318 aa15.23■□□□□ 0.03
DNMT3B-201ENST00000201963 FOXD1Q16676 465 aa15.22■□□□□ 0.03
DNMT3B-201ENST00000201963 TIMELESSQ9UNS1 1208 aa15.22■□□□□ 0.03
DNMT3B-201ENST00000201963 ARHGAP35Q9NRY4 1499 aa15.22■□□□□ 0.03
DNMT3B-201ENST00000201963 RAB3GAP2Q9H2M9 1393 aa15.22■□□□□ 0.03
DNMT3B-201ENST00000201963 NUTM2DQ5VT03 806 aaPredicted RBP15.2■□□□□ 0.02
DNMT3B-201ENST00000201963 ERICH6BQ5W0A0 696 aa15.2■□□□□ 0.02
DNMT3B-201ENST00000201963 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
DNMT3B-201ENST00000201963 HSP90AA1P07900 732 aaKnown RBP15.18■□□□□ 0.02
DNMT3B-201ENST00000201963 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
DNMT3B-201ENST00000201963 SETD5Q9C0A6 1442 aa15.17■□□□□ 0.02
DNMT3B-201ENST00000201963 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
DNMT3B-201ENST00000201963 ARAP1Q96P48 1450 aa15.17■□□□□ 0.02
DNMT3B-201ENST00000201963 ANP32BQ92688 251 aaKnown RBP15.17■□□□□ 0.02
DNMT3B-201ENST00000201963 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
DNMT3B-201ENST00000201963 KANK1Q14678 1352 aa15.15■□□□□ 0.02
DNMT3B-201ENST00000201963 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.02
DNMT3B-201ENST00000201963 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
DNMT3B-201ENST00000201963 RGS3P49796 1198 aa15.13■□□□□ 0.01
DNMT3B-201ENST00000201963 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.01
DNMT3B-201ENST00000201963 THOC2Q8NI27 1593 aaKnown RBP15.12■□□□□ 0.01
DNMT3B-201ENST00000201963 PKD2Q13563 968 aa15.11■□□□□ 0.01
DNMT3B-201ENST00000201963 NUP155O75694 1391 aa15.11■□□□□ 0.01
DNMT3B-201ENST00000201963 CD109Q6YHK3 1445 aa15.1■□□□□ 0.01
DNMT3B-201ENST00000201963 CDK13Q14004 1512 aaKnown RBP15.1■□□□□ 0.01
DNMT3B-201ENST00000201963 SAFB2Q14151 953 aaKnown RBP eCLIP15.1■□□□□ 0.01
DNMT3B-201ENST00000201963 BECN1Q14457 450 aa15.09■□□□□ 0.01
DNMT3B-201ENST00000201963 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0.01
DNMT3B-201ENST00000201963 NAP1L5Q96NT1 182 aaPredicted RBP15.08■□□□□ 0
DNMT3B-201ENST00000201963 LMOD2Q6P5Q4 547 aa15.08■□□□□ 0
DNMT3B-201ENST00000201963 CUL7Q14999 1698 aa15.08■□□□□ 0
DNMT3B-201ENST00000201963 SCAPERQ9BY12 1400 aa15.08■□□□□ 0
DNMT3B-201ENST00000201963 ARHGAP5Q13017 1502 aa15.08■□□□□ 0
DNMT3B-201ENST00000201963 ZBTB7CA1YPR0 619 aa15.07■□□□□ 0
DNMT3B-201ENST00000201963 KIF21BO75037 1637 aa15.07■□□□□ 0
DNMT3B-201ENST00000201963 STK26Q9P289 416 aa15.06■□□□□ 0
DNMT3B-201ENST00000201963 RSPH4AQ5TD94 716 aa15.06■□□□□ 0
DNMT3B-201ENST00000201963 ADAMTS12P58397 1594 aa15.04■□□□□ -0
DNMT3B-201ENST00000201963 TRIM44Q96DX7 344 aaPredicted RBP15.04■□□□□ -0
DNMT3B-201ENST00000201963 CASKIN1Q8WXD9 1431 aa15.04■□□□□ -0
DNMT3B-201ENST00000201963 CARD11Q9BXL7 1154 aa15.03■□□□□ -0
DNMT3B-201ENST00000201963 ASXL2Q76L83 1435 aa15.02■□□□□ -0
DNMT3B-201ENST00000201963 TARBP1Q13395 1621 aaKnown RBP15.01□□□□□ -0.01
DNMT3B-201ENST00000201963 DCAF11Q8TEB1 546 aa15.01□□□□□ -0.01
DNMT3B-201ENST00000201963 TCERG1O14776 1098 aaKnown RBP15□□□□□ -0.01
DNMT3B-201ENST00000201963 SLC24A1O60721 1099 aa15□□□□□ -0.01
DNMT3B-201ENST00000201963 ARHGEF11O15085 1522 aa15□□□□□ -0.01
DNMT3B-201ENST00000201963 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
DNMT3B-201ENST00000201963 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
DNMT3B-201ENST00000201963 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
DNMT3B-201ENST00000201963 POGKQ9P215 609 aa15□□□□□ -0.01
DNMT3B-201ENST00000201963 NUDCQ9Y266 331 aa15□□□□□ -0.01
DNMT3B-201ENST00000201963 NUP160Q12769 1436 aa14.99□□□□□ -0.01
DNMT3B-201ENST00000201963 A0A0G2JS52 829 aa14.99□□□□□ -0.01
DNMT3B-201ENST00000201963 PHLDB1Q86UU1 1377 aa14.99□□□□□ -0.01
DNMT3B-201ENST00000201963 PRKCSHP14314 528 aaPredicted RBP14.98□□□□□ -0.01
DNMT3B-201ENST00000201963 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 ANO8Q9HCE9 1232 aaPredicted RBP14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 EID1Q9Y6B2 187 aa14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 EPRSP07814 1512 aaKnown RBP14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 RCAN3Q9UKA8 241 aa14.97□□□□□ -0.01
DNMT3B-201ENST00000201963 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
DNMT3B-201ENST00000201963 MSH5O43196 834 aa14.95□□□□□ -0.02
DNMT3B-201ENST00000201963 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
DNMT3B-201ENST00000201963 EFCAB5A4FU69 1503 aa14.95□□□□□ -0.02
DNMT3B-201ENST00000201963 MPHOSPH9Q99550 1183 aa14.95□□□□□ -0.02
DNMT3B-201ENST00000201963 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
DNMT3B-201ENST00000201963 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
DNMT3B-201ENST00000201963 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
DNMT3B-201ENST00000201963 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
DNMT3B-201ENST00000201963 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
DNMT3B-201ENST00000201963 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
DNMT3B-201ENST00000201963 L3MBTL2Q969R5 705 aa14.92□□□□□ -0.02
DNMT3B-201ENST00000201963 ABCA5Q8WWZ7 1642 aa14.92□□□□□ -0.02
DNMT3B-201ENST00000201963 SLC4A3P48751 1232 aa14.92□□□□□ -0.02
DNMT3B-201ENST00000201963 LRRC9Q6ZRR7 1453 aa14.91□□□□□ -0.02
DNMT3B-201ENST00000201963 ATP10BO94823 1461 aa14.91□□□□□ -0.02
DNMT3B-201ENST00000201963 FYCO1Q9BQS8 1478 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms