RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
PCDHB4-201ENST00000194152 TMC1Q8TDI8 760 aa17.56■□□□□ 0.4
PCDHB4-201ENST00000194152 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
PCDHB4-201ENST00000194152 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
PCDHB4-201ENST00000194152 PTPRGP23470 1445 aa17.52■□□□□ 0.4
PCDHB4-201ENST00000194152 NUTM2DQ5VT03 806 aaPredicted RBP17.51■□□□□ 0.39
PCDHB4-201ENST00000194152 FYCO1Q9BQS8 1478 aa17.51■□□□□ 0.39
PCDHB4-201ENST00000194152 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
PCDHB4-201ENST00000194152 CC2D1BQ5T0F9 858 aaKnown RBP17.5■□□□□ 0.39
PCDHB4-201ENST00000194152 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
PCDHB4-201ENST00000194152 GGT6Q6P531 493 aa17.49■□□□□ 0.39
PCDHB4-201ENST00000194152 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
PCDHB4-201ENST00000194152 NBPF8Q3BBV2 869 aa17.48■□□□□ 0.39
PCDHB4-201ENST00000194152 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
PCDHB4-201ENST00000194152 TNNT2P45379 298 aaPredicted RBP17.44■□□□□ 0.38
PCDHB4-201ENST00000194152 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
PCDHB4-201ENST00000194152 AFAP1Q8N556 730 aa17.44■□□□□ 0.38
PCDHB4-201ENST00000194152 MLECQ14165 292 aa17.43■□□□□ 0.38
PCDHB4-201ENST00000194152 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
PCDHB4-201ENST00000194152 NAIPQ13075 1403 aa17.41■□□□□ 0.38
PCDHB4-201ENST00000194152 ANKRD30AQ9BXX3 1397 aa17.41■□□□□ 0.38
PCDHB4-201ENST00000194152 KIF3BO15066 747 aa17.41■□□□□ 0.38
PCDHB4-201ENST00000194152 EPRSP07814 1512 aaKnown RBP17.41■□□□□ 0.38
PCDHB4-201ENST00000194152 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
PCDHB4-201ENST00000194152 C11orf95C9JLR9 678 aaPredicted RBP17.41■□□□□ 0.38
PCDHB4-201ENST00000194152 KIF21AQ7Z4S6 1674 aa17.41■□□□□ 0.38
PCDHB4-201ENST00000194152 WASHC2AQ641Q2 1341 aa17.4■□□□□ 0.38
PCDHB4-201ENST00000194152 UACAQ9BZF9 1416 aa17.39■□□□□ 0.38
PCDHB4-201ENST00000194152 IFT140Q96RY7 1462 aa17.39■□□□□ 0.37
PCDHB4-201ENST00000194152 STAG3Q9UJ98 1225 aa17.38■□□□□ 0.37
PCDHB4-201ENST00000194152 NPM2Q86SE8 214 aaKnown RBP17.37■□□□□ 0.37
PCDHB4-201ENST00000194152 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
PCDHB4-201ENST00000194152 CYB5RLQ6IPT4 315 aa17.36■□□□□ 0.37
PCDHB4-201ENST00000194152 EFCAB5A4FU69 1503 aa17.36■□□□□ 0.37
PCDHB4-201ENST00000194152 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
PCDHB4-201ENST00000194152 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
PCDHB4-201ENST00000194152 IQGAP2Q13576 1575 aa17.34■□□□□ 0.37
PCDHB4-201ENST00000194152 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.37
PCDHB4-201ENST00000194152 IL27Q8NEV9 243 aa17.33■□□□□ 0.36
PCDHB4-201ENST00000194152 HFM1A2PYH4 1435 aa17.33■□□□□ 0.36
PCDHB4-201ENST00000194152 NOP58Q9Y2X3 529 aaKnown RBP17.32■□□□□ 0.36
PCDHB4-201ENST00000194152 NBPF1Q3BBV0 1214 aa17.32■□□□□ 0.36
PCDHB4-201ENST00000194152 NEUROD2Q15784 382 aa17.31■□□□□ 0.36
PCDHB4-201ENST00000194152 MAPKBP1O60336 1514 aa17.31■□□□□ 0.36
PCDHB4-201ENST00000194152 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
PCDHB4-201ENST00000194152 KIF15Q9NS87 1388 aa17.3■□□□□ 0.36
PCDHB4-201ENST00000194152 KIAA0586Q9BVV6 1533 aa17.3■□□□□ 0.36
PCDHB4-201ENST00000194152 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
PCDHB4-201ENST00000194152 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
PCDHB4-201ENST00000194152 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
PCDHB4-201ENST00000194152 ROCK2O75116 1388 aaKnown RBP17.29■□□□□ 0.36
PCDHB4-201ENST00000194152 STK26Q9P289 416 aa17.28■□□□□ 0.36
PCDHB4-201ENST00000194152 KIF7Q2M1P5 1343 aa17.28■□□□□ 0.36
PCDHB4-201ENST00000194152 ANKRD50Q9ULJ7 1429 aa17.28■□□□□ 0.36
PCDHB4-201ENST00000194152 CUL7Q14999 1698 aa17.28■□□□□ 0.36
PCDHB4-201ENST00000194152 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.35
PCDHB4-201ENST00000194152 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.35
PCDHB4-201ENST00000194152 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
PCDHB4-201ENST00000194152 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
PCDHB4-201ENST00000194152 DAPK1P53355 1430 aa17.25■□□□□ 0.35
PCDHB4-201ENST00000194152 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
PCDHB4-201ENST00000194152 ABCC5O15440 1437 aa17.24■□□□□ 0.35
PCDHB4-201ENST00000194152 TROQ12816 1431 aaPredicted RBP17.24■□□□□ 0.35
PCDHB4-201ENST00000194152 USP47Q96K76 1375 aa17.23■□□□□ 0.35
PCDHB4-201ENST00000194152 EHBP1L1Q8N3D4 1523 aa17.23■□□□□ 0.35
PCDHB4-201ENST00000194152 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
PCDHB4-201ENST00000194152 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
PCDHB4-201ENST00000194152 PAK3O75914 559 aaPredicted RBP17.21■□□□□ 0.35
PCDHB4-201ENST00000194152 SUPT6HQ7KZ85 1726 aaKnown RBP17.2■□□□□ 0.34
PCDHB4-201ENST00000194152 MAGI3Q5TCQ9 1506 aa17.2■□□□□ 0.34
PCDHB4-201ENST00000194152 ESF1Q9H501 851 aaKnown RBP17.2■□□□□ 0.34
PCDHB4-201ENST00000194152 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
PCDHB4-201ENST00000194152 WDR43Q15061 677 aaKnown RBP eCLIP17.19■□□□□ 0.34
PCDHB4-201ENST00000194152 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
PCDHB4-201ENST00000194152 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
PCDHB4-201ENST00000194152 ARID4BQ4LE39 1312 aaPredicted RBP17.19■□□□□ 0.34
PCDHB4-201ENST00000194152 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
PCDHB4-201ENST00000194152 TRAK1Q9UPV9 953 aa17.18■□□□□ 0.34
PCDHB4-201ENST00000194152 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
PCDHB4-201ENST00000194152 CCDC7Q96M83 1385 aa17.16■□□□□ 0.34
PCDHB4-201ENST00000194152 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
PCDHB4-201ENST00000194152 PANK3Q9H999 370 aa17.16■□□□□ 0.34
PCDHB4-201ENST00000194152 C9orf84Q5VXU9 1444 aa17.15■□□□□ 0.34
PCDHB4-201ENST00000194152 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
PCDHB4-201ENST00000194152 CANXP27824 592 aaKnown RBP17.15■□□□□ 0.34
PCDHB4-201ENST00000194152 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
PCDHB4-201ENST00000194152 RAPGEF3O95398 923 aa17.14■□□□□ 0.33
PCDHB4-201ENST00000194152 TMF1P82094 1093 aa17.13■□□□□ 0.33
PCDHB4-201ENST00000194152 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
PCDHB4-201ENST00000194152 CCDC146Q8IYE0 955 aa17.13■□□□□ 0.33
PCDHB4-201ENST00000194152 CTTNBP2Q8WZ74 1663 aa17.12■□□□□ 0.33
PCDHB4-201ENST00000194152 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
PCDHB4-201ENST00000194152 ARHGAP5Q13017 1502 aa17.12■□□□□ 0.33
PCDHB4-201ENST00000194152 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
PCDHB4-201ENST00000194152 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
PCDHB4-201ENST00000194152 CAMSAP2Q08AD1 1489 aa17.11■□□□□ 0.33
PCDHB4-201ENST00000194152 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
PCDHB4-201ENST00000194152 NEFMP07197 916 aa17.11■□□□□ 0.33
PCDHB4-201ENST00000194152 SOX12O15370 315 aa17.1■□□□□ 0.33
PCDHB4-201ENST00000194152 WASHC2CQ9Y4E1 1318 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms