RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 FRAT2O75474 233 aaPredicted RBP19.79■□□□□ 0.76
PDZD4-201ENST00000164640 NAIPQ13075 1403 aa19.78■□□□□ 0.76
PDZD4-201ENST00000164640 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
PDZD4-201ENST00000164640 CDCA7LQ96GN5 454 aa19.77■□□□□ 0.76
PDZD4-201ENST00000164640 CRBNQ96SW2 442 aa19.77■□□□□ 0.76
PDZD4-201ENST00000164640 MS4A1P11836 297 aa19.77■□□□□ 0.75
PDZD4-201ENST00000164640 GLIPR1L2Q4G1C9 344 aa19.77■□□□□ 0.75
PDZD4-201ENST00000164640 NAP1L5Q96NT1 182 aaPredicted RBP19.76■□□□□ 0.75
PDZD4-201ENST00000164640 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
PDZD4-201ENST00000164640 WASHC2CQ9Y4E1 1318 aa19.75■□□□□ 0.75
PDZD4-201ENST00000164640 NCOA1Q15788 1441 aa19.75■□□□□ 0.75
PDZD4-201ENST00000164640 PCF11O94913 1555 aaKnown RBP19.74■□□□□ 0.75
PDZD4-201ENST00000164640 RSPH6AQ9H0K4 717 aa19.74■□□□□ 0.75
PDZD4-201ENST00000164640 ZNF777Q9ULD5 760 aaPredicted RBP19.73■□□□□ 0.75
PDZD4-201ENST00000164640 SLKQ9H2G2 1235 aaPredicted RBP19.72■□□□□ 0.75
PDZD4-201ENST00000164640 CC2D1BQ5T0F9 858 aaKnown RBP19.71■□□□□ 0.75
PDZD4-201ENST00000164640 MAP3K1Q13233 1512 aa19.71■□□□□ 0.75
PDZD4-201ENST00000164640 ARID4BQ4LE39 1312 aaPredicted RBP19.68■□□□□ 0.74
PDZD4-201ENST00000164640 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
PDZD4-201ENST00000164640 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
PDZD4-201ENST00000164640 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
PDZD4-201ENST00000164640 USP47Q96K76 1375 aa19.67■□□□□ 0.74
PDZD4-201ENST00000164640 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
PDZD4-201ENST00000164640 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
PDZD4-201ENST00000164640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.65■□□□□ 0.74
PDZD4-201ENST00000164640 SPRYD3Q8NCJ5 442 aa19.64■□□□□ 0.74
PDZD4-201ENST00000164640 PKNOX2Q96KN3 472 aa19.64■□□□□ 0.74
PDZD4-201ENST00000164640 GZF1Q9H116 711 aaPredicted RBP19.64■□□□□ 0.74
PDZD4-201ENST00000164640 MYOM3Q5VTT5 1437 aa19.64■□□□□ 0.73
PDZD4-201ENST00000164640 CASKIN1Q8WXD9 1431 aa19.63■□□□□ 0.73
PDZD4-201ENST00000164640 ST20-MTHFSA0A0A6YYL1 179 aa19.62■□□□□ 0.73
PDZD4-201ENST00000164640 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
PDZD4-201ENST00000164640 CFTRP13569 1480 aa19.62■□□□□ 0.73
PDZD4-201ENST00000164640 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
PDZD4-201ENST00000164640 FAM161AQ3B820 660 aa19.61■□□□□ 0.73
PDZD4-201ENST00000164640 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
PDZD4-201ENST00000164640 C20orf194Q5TEA3 1177 aa19.6■□□□□ 0.73
PDZD4-201ENST00000164640 FAM43AQ8N2R8 423 aa19.6■□□□□ 0.73
PDZD4-201ENST00000164640 FYCO1Q9BQS8 1478 aa19.6■□□□□ 0.73
PDZD4-201ENST00000164640 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
PDZD4-201ENST00000164640 DCAF11Q8TEB1 546 aa19.58■□□□□ 0.73
PDZD4-201ENST00000164640 POGKQ9P215 609 aa19.58■□□□□ 0.72
PDZD4-201ENST00000164640 RALBP1Q15311 655 aa19.57■□□□□ 0.72
PDZD4-201ENST00000164640 PKD2Q13563 968 aa19.57■□□□□ 0.72
PDZD4-201ENST00000164640 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
PDZD4-201ENST00000164640 NLRP13Q86W25 1043 aa19.56■□□□□ 0.72
PDZD4-201ENST00000164640 PNNQ9H307 717 aaKnown RBP19.56■□□□□ 0.72
PDZD4-201ENST00000164640 PDE3BQ13370 1112 aa19.56■□□□□ 0.72
PDZD4-201ENST00000164640 RGL3Q3MIN7 710 aa19.55■□□□□ 0.72
PDZD4-201ENST00000164640 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.55■□□□□ 0.72
PDZD4-201ENST00000164640 BECN1Q14457 450 aa19.55■□□□□ 0.72
PDZD4-201ENST00000164640 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
PDZD4-201ENST00000164640 WDR43Q15061 677 aaKnown RBP eCLIP19.53■□□□□ 0.72
PDZD4-201ENST00000164640 DHX29Q7Z478 1369 aaKnown RBP19.52■□□□□ 0.72
PDZD4-201ENST00000164640 ZNF644Q9H582 1327 aaPredicted RBP19.52■□□□□ 0.72
PDZD4-201ENST00000164640 BICRAQ9NZM4 1560 aa19.52■□□□□ 0.72
PDZD4-201ENST00000164640 CENPQQ7L2Z9 268 aaPredicted RBP19.52■□□□□ 0.72
PDZD4-201ENST00000164640 HSP90AA2PQ14568 343 aaPredicted RBP19.51■□□□□ 0.71
PDZD4-201ENST00000164640 HSP90AA1P07900 732 aaKnown RBP19.51■□□□□ 0.71
PDZD4-201ENST00000164640 KTN1Q86UP2 1357 aaKnown RBP19.51■□□□□ 0.71
PDZD4-201ENST00000164640 L1TD1Q5T7N2 865 aaKnown RBP19.5■□□□□ 0.71
PDZD4-201ENST00000164640 UPF2Q9HAU5 1272 aaKnown RBP19.5■□□□□ 0.71
PDZD4-201ENST00000164640 KDM5BQ9UGL1 1544 aa19.48■□□□□ 0.71
PDZD4-201ENST00000164640 BRD4O60885 1362 aaPredicted RBP19.47■□□□□ 0.71
PDZD4-201ENST00000164640 ANKRD30BQ9BXX2 1392 aa19.47■□□□□ 0.71
PDZD4-201ENST00000164640 CFAP43Q8NDM7 1665 aa19.46■□□□□ 0.71
PDZD4-201ENST00000164640 NCAPD3P42695 1498 aa19.45■□□□□ 0.7
PDZD4-201ENST00000164640 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
PDZD4-201ENST00000164640 ROCK2O75116 1388 aaKnown RBP19.45■□□□□ 0.7
PDZD4-201ENST00000164640 RRAGDQ9NQL2 400 aaPredicted RBP19.44■□□□□ 0.7
PDZD4-201ENST00000164640 GOLGA6L3A6NEY3 463 aa19.44■□□□□ 0.7
PDZD4-201ENST00000164640 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
PDZD4-201ENST00000164640 C8orf34Q49A92 452 aa19.41■□□□□ 0.7
PDZD4-201ENST00000164640 ZMYND15Q9H091 742 aa19.41■□□□□ 0.7
PDZD4-201ENST00000164640 TRIM44Q96DX7 344 aaPredicted RBP19.4■□□□□ 0.7
PDZD4-201ENST00000164640 CFDP1Q9UEE9 299 aaPredicted RBP19.4■□□□□ 0.7
PDZD4-201ENST00000164640 RPRD2Q5VT52 1461 aaKnown RBP19.4■□□□□ 0.7
PDZD4-201ENST00000164640 CCDC146Q8IYE0 955 aa19.39■□□□□ 0.7
PDZD4-201ENST00000164640 ADAMTS8Q9UP79 889 aa19.37■□□□□ 0.69
PDZD4-201ENST00000164640 SPATA31E1Q6ZUB1 1445 aa19.37■□□□□ 0.69
PDZD4-201ENST00000164640 PANK3Q9H999 370 aa19.37■□□□□ 0.69
PDZD4-201ENST00000164640 MIA2Q96PC5 1412 aa19.36■□□□□ 0.69
PDZD4-201ENST00000164640 GOLGA2Q08379 1002 aa19.36■□□□□ 0.69
PDZD4-201ENST00000164640 NEUROD2Q15784 382 aa19.35■□□□□ 0.69
PDZD4-201ENST00000164640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDZD4-201ENST00000164640 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.68
PDZD4-201ENST00000164640 PANK2Q9BZ23 570 aa19.33■□□□□ 0.68
PDZD4-201ENST00000164640 DENND4BO75064 1496 aaPredicted RBP19.33■□□□□ 0.68
PDZD4-201ENST00000164640 KDM6BO15054 1643 aa19.32■□□□□ 0.68
PDZD4-201ENST00000164640 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
PDZD4-201ENST00000164640 KNSTRNQ9Y448 316 aa19.32■□□□□ 0.68
PDZD4-201ENST00000164640 LRPPRCP42704 1394 aaKnown RBP19.32■□□□□ 0.68
PDZD4-201ENST00000164640 NUP155O75694 1391 aa19.31■□□□□ 0.68
PDZD4-201ENST00000164640 ARID3AQ99856 593 aa19.31■□□□□ 0.68
PDZD4-201ENST00000164640 SUPT6HQ7KZ85 1726 aaKnown RBP19.3■□□□□ 0.68
PDZD4-201ENST00000164640 MYH16Q9H6N6 1097 aa19.3■□□□□ 0.68
PDZD4-201ENST00000164640 COG6Q9Y2V7 657 aa19.3■□□□□ 0.68
PDZD4-201ENST00000164640 BCAR3O75815 825 aa19.3■□□□□ 0.68
PDZD4-201ENST00000164640 SEC24BO95487 1268 aa19.29■□□□□ 0.68
PDZD4-201ENST00000164640 TEX14Q8IWB6 1497 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms