RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SYNJ2O15056 1496 aa18.51■□□□□ 0.55
CTNS-201ENST00000046640 DENND4BO75064 1496 aaPredicted RBP18.5■□□□□ 0.55
CTNS-201ENST00000046640 RAPGEF6Q8TEU7 1601 aa18.5■□□□□ 0.55
CTNS-201ENST00000046640 FKBP8Q14318 412 aa18.49■□□□□ 0.55
CTNS-201ENST00000046640 MAGI1Q96QZ7 1491 aaPredicted RBP18.49■□□□□ 0.55
CTNS-201ENST00000046640 DAPK1P53355 1430 aa18.49■□□□□ 0.55
CTNS-201ENST00000046640 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
CTNS-201ENST00000046640 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
CTNS-201ENST00000046640 ABCC5O15440 1437 aa18.49■□□□□ 0.55
CTNS-201ENST00000046640 ANP32CO43423 234 aa18.48■□□□□ 0.55
CTNS-201ENST00000046640 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
CTNS-201ENST00000046640 CARMIL2Q6F5E8 1435 aa18.44■□□□□ 0.54
CTNS-201ENST00000046640 TROQ12816 1431 aaPredicted RBP18.43■□□□□ 0.54
CTNS-201ENST00000046640 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
CTNS-201ENST00000046640 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
CTNS-201ENST00000046640 KDM5BQ9UGL1 1544 aa18.41■□□□□ 0.54
CTNS-201ENST00000046640 KIF14Q15058 1648 aa18.39■□□□□ 0.53
CTNS-201ENST00000046640 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
CTNS-201ENST00000046640 AKNAQ7Z591 1439 aa18.38■□□□□ 0.53
CTNS-201ENST00000046640 NUP160Q12769 1436 aa18.38■□□□□ 0.53
CTNS-201ENST00000046640 GPATCH8Q9UKJ3 1502 aaKnown RBP18.38■□□□□ 0.53
CTNS-201ENST00000046640 NBPF8Q3BBV2 869 aa18.38■□□□□ 0.53
CTNS-201ENST00000046640 CAMSAP2Q08AD1 1489 aa18.37■□□□□ 0.53
CTNS-201ENST00000046640 EIF4G2P78344 907 aaKnown RBP eCLIP18.37■□□□□ 0.534e-10■■■■■ 50.6
CTNS-201ENST00000046640 WASHC2AQ641Q2 1341 aa18.37■□□□□ 0.53
CTNS-201ENST00000046640 ROCK1Q13464 1354 aa18.36■□□□□ 0.53
CTNS-201ENST00000046640 DNMT1P26358 1616 aaKnown RBP18.35■□□□□ 0.53
CTNS-201ENST00000046640 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
CTNS-201ENST00000046640 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
CTNS-201ENST00000046640 HNRNPMP52272 730 aaKnown RBP eCLIP18.34■□□□□ 0.53
CTNS-201ENST00000046640 C11orf95C9JLR9 678 aaPredicted RBP18.34■□□□□ 0.53
CTNS-201ENST00000046640 PKD2Q13563 968 aa18.32■□□□□ 0.52
CTNS-201ENST00000046640 ATP10BO94823 1461 aa18.32■□□□□ 0.52
CTNS-201ENST00000046640 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
CTNS-201ENST00000046640 NEFLP07196 543 aa18.31■□□□□ 0.52
CTNS-201ENST00000046640 CCER2I3L3R5 266 aa18.3■□□□□ 0.52
CTNS-201ENST00000046640 POLR3GLQ9BT43 218 aa18.3■□□□□ 0.52
CTNS-201ENST00000046640 PTPRGP23470 1445 aa18.3■□□□□ 0.52
CTNS-201ENST00000046640 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
CTNS-201ENST00000046640 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
CTNS-201ENST00000046640 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
CTNS-201ENST00000046640 RPRD2Q5VT52 1461 aaKnown RBP18.25■□□□□ 0.51
CTNS-201ENST00000046640 PZPP20742 1482 aa18.25■□□□□ 0.51
CTNS-201ENST00000046640 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
CTNS-201ENST00000046640 NUP155O75694 1391 aa18.24■□□□□ 0.51
CTNS-201ENST00000046640 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
CTNS-201ENST00000046640 CCDC184Q52MB2 194 aa18.23■□□□□ 0.51
CTNS-201ENST00000046640 KDM2AQ9Y2K7 1162 aa18.23■□□□□ 0.51
CTNS-201ENST00000046640 ABCA8O94911 1581 aa18.23■□□□□ 0.51
CTNS-201ENST00000046640 HNRNPUQ00839 825 aaKnown RBP eCLIP18.22■□□□□ 0.51
CTNS-201ENST00000046640 ANP32EQ9BTT0 268 aa18.22■□□□□ 0.51
CTNS-201ENST00000046640 ITSN2Q9NZM3 1697 aa18.21■□□□□ 0.51
CTNS-201ENST00000046640 TEX14Q8IWB6 1497 aa18.2■□□□□ 0.5
CTNS-201ENST00000046640 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
CTNS-201ENST00000046640 ABCC10Q5T3U5 1492 aa18.19■□□□□ 0.5
CTNS-201ENST00000046640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.5
CTNS-201ENST00000046640 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
CTNS-201ENST00000046640 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
CTNS-201ENST00000046640 CDC42BPAQ5VT25 1732 aa18.17■□□□□ 0.5
CTNS-201ENST00000046640 FAM9BQ8IZU0 186 aa18.16■□□□□ 0.5
CTNS-201ENST00000046640 ADCY10Q96PN6 1610 aa18.16■□□□□ 0.5
CTNS-201ENST00000046640 KIF7Q2M1P5 1343 aa18.16■□□□□ 0.5
CTNS-201ENST00000046640 RBM19Q9Y4C8 960 aaKnown RBP18.16■□□□□ 0.5
CTNS-201ENST00000046640 KIF15Q9NS87 1388 aa18.15■□□□□ 0.5
CTNS-201ENST00000046640 ADGRL2O95490 1459 aa18.14■□□□□ 0.49
CTNS-201ENST00000046640 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
CTNS-201ENST00000046640 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
CTNS-201ENST00000046640 ADGBQ8N7X0 1667 aa18.12■□□□□ 0.49
CTNS-201ENST00000046640 CHD1O14646 1710 aa18.12■□□□□ 0.49
CTNS-201ENST00000046640 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
CTNS-201ENST00000046640 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
CTNS-201ENST00000046640 PRKRIP1Q9H875 184 aaPredicted RBP18.11■□□□□ 0.49
CTNS-201ENST00000046640 RGL3Q3MIN7 710 aa18.11■□□□□ 0.49
CTNS-201ENST00000046640 MRS2Q9HD23 443 aa18.1■□□□□ 0.49
CTNS-201ENST00000046640 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
CTNS-201ENST00000046640 USP47Q96K76 1375 aa18.08■□□□□ 0.48
CTNS-201ENST00000046640 CARD11Q9BXL7 1154 aa18.08■□□□□ 0.48
CTNS-201ENST00000046640 SPATA31E1Q6ZUB1 1445 aa18.07■□□□□ 0.48
CTNS-201ENST00000046640 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
CTNS-201ENST00000046640 BCL11AQ9H165 835 aa18.05■□□□□ 0.48
CTNS-201ENST00000046640 ARHGAP5Q13017 1502 aa18.04■□□□□ 0.48
CTNS-201ENST00000046640 SAMD9LQ8IVG5 1584 aa18.04■□□□□ 0.48
CTNS-201ENST00000046640 CCDC141Q6ZP82 1450 aa18.02■□□□□ 0.48
CTNS-201ENST00000046640 SYCP2Q9BX26 1530 aa18.02■□□□□ 0.48
CTNS-201ENST00000046640 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.47
CTNS-201ENST00000046640 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
CTNS-201ENST00000046640 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
CTNS-201ENST00000046640 TTC37Q6PGP7 1564 aa18■□□□□ 0.47
CTNS-201ENST00000046640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.98■□□□□ 0.47
CTNS-201ENST00000046640 RSPH4AQ5TD94 716 aa17.97■□□□□ 0.47
CTNS-201ENST00000046640 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
CTNS-201ENST00000046640 PREX2Q70Z35 1606 aa17.95■□□□□ 0.46
CTNS-201ENST00000046640 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
CTNS-201ENST00000046640 BCORL1Q5H9F3 1711 aa17.94■□□□□ 0.46
CTNS-201ENST00000046640 ARHGEF5Q12774 1597 aa17.94■□□□□ 0.46
CTNS-201ENST00000046640 AFAP1Q8N556 730 aa17.94■□□□□ 0.46
CTNS-201ENST00000046640 MYT1LQ9UL68 1186 aa17.94■□□□□ 0.46
CTNS-201ENST00000046640 FAM135AQ9P2D6 1515 aa17.94■□□□□ 0.46
CTNS-201ENST00000046640 ROCK2O75116 1388 aaKnown RBP17.93■□□□□ 0.46
CTNS-201ENST00000046640 ABCC2Q92887 1545 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms