RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Plekhh2Q8C115 1491 aa14.55□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 Dnmt1P13864 1620 aaKnown RBP14.54□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 Mapkbp1Q6NS57 1503 aa14.54□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 Cabp1Q9JLK7 227 aa14.54□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 Mroh2aD3Z750 1679 aa14.53□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 Gm13697A2AK42 830 aa14.53□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 NclP09405 707 aaKnown RBP14.53□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 Magi1Q6RHR9 1471 aa14.52□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 SphkapQ6NSW3 1687 aa14.52□□□□□ -0.08
Cpsf3-211ENSMUST00000222968 Mphosph9A6H5Y1 991 aa14.52□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Fam163aQ8CAA5 168 aa14.52□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Kdm3bQ6ZPY7 1562 aa14.52□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Dhx57Q6P5D3 1388 aaKnown RBP14.52□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Il16O54824 1322 aa14.51□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Ccdc141E9Q8Q6 1531 aa14.5□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Lamc1P02468 1607 aaKnown RBP14.5□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Kif21bQ9QXL1 1668 aa14.48□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Mtus2Q3UHD3 1353 aa14.47□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Prex2Q3LAC4 1598 aa14.46□□□□□ -0.09
Cpsf3-211ENSMUST00000222968 Mlh3A0A1Y7VMP7 1443 aa14.46□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 AlkP97793 1621 aa14.45□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Rrbp1Q99PL5 1605 aaKnown RBP14.45□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Rprd2Q6NXI6 1469 aaKnown RBP14.45□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Arhgef12Q8R4H2 1543 aaKnown RBP14.45□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Adgrb2Q8CGM1 1561 aa14.44□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Ube2uB1AUC4 352 aa14.44□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Zfp644E9QA22 1323 aa14.43□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Neo1P97798 1493 aa14.43□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Caskin1Q6P9K8 1431 aa14.43□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Pprc1Q6NZN1 1644 aa14.42□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Jph4Q80WT0 628 aa14.41□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Fam208aQ69ZR9 1610 aaKnown RBP14.41□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Pik3c2gO70167 1506 aa14.4□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Pkd2O35245 966 aa14.4□□□□□ -0.1
Cpsf3-211ENSMUST00000222968 Usp47Q8BY87 1376 aa14.39□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Trpm2Q91YD4 1506 aa14.38□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Fancd2Q80V62 1450 aa14.38□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Fgd6Q69ZL1 1399 aa14.38□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Tdrd9Q14BI7 1383 aa14.36□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Mapk8ip2Q9ERE9 830 aa14.35□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Supt6hQ62383 1726 aaKnown RBP14.34□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Sin3aQ60520 1274 aaKnown RBP14.33□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Fmn2Q9JL04 1578 aa14.33□□□□□ -0.11
Cpsf3-211ENSMUST00000222968 Csrnp3P59055 597 aa14.33□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Pdcd11Q6NS46 1862 aaKnown RBP14.32□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 AknaQ80VW7 1404 aa14.31□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Gm32742A0A1B0GT42 1604 aa14.3□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Kif14L0N7N1 1674 aaKnown RBP14.3□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Ncoa1P70365 1447 aa14.3□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Ttll5Q8CHB8 1328 aa14.3□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Mbd5B1AYB6 1498 aa14.3□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Adgrl2Q8JZZ7 1487 aa14.3□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Kiaa1210E9Q0C6 1637 aa14.29□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Rnf17Q99MV7 1640 aa14.29□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 DroshaQ5HZJ0 1373 aaKnown RBP14.29□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Gm14025A2AP89 1413 aa14.29□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Dhx9O70133 1380 aaKnown RBP14.28□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Mast1Q9R1L5 1570 aa14.27□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Smg6P61406 1418 aaKnown RBP14.27□□□□□ -0.12
Cpsf3-211ENSMUST00000222968 Neurl4Q5NCX5 1563 aa14.27□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 NhsB1AV60 1647 aa14.27□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Wdr7Q920I9 1489 aa14.26□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Nup155Q99P88 1391 aaKnown RBP14.25□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Chd1P40201 1711 aa14.25□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Lrrc9Q8CDN9 1456 aa14.24□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Fkbp15Q6P9Q6 1216 aaKnown RBP14.24□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Cfap74Q3UY96 1578 aa14.23□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Abcc1O35379 1528 aa14.22□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Arhgap5P97393 1501 aa14.22□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 PtprgQ05909 1442 aa14.22□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Trappc8E9PWG2 1437 aa14.21□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Znf710Q3U288 666 aa14.21□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 1700123L14RikQ3V2K7 440 aa14.21□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Trak1Q6PD31 939 aa14.21□□□□□ -0.13
Cpsf3-211ENSMUST00000222968 Ssh2Q5SW75 1423 aa14.21□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Abcc3B2RX12 1523 aa14.2□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Hecw1Q8K4P8 1604 aa14.2□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Mug2P28666 1451 aa14.2□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Abca8bQ8K440 1620 aa14.19□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Stra8P70278 393 aa14.19□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Aplp2Q06335 707 aa14.18□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Asxl1P59598 1514 aa14.18□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Dot1lQ6XZL8 1540 aa14.18□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Map4P27546 1125 aaKnown RBP14.18□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Tnnt3Q9QZ47 272 aa14.17□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Dapk1Q80YE7 1442 aa14.16□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Naip6Q9JIB6 1403 aa14.16□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Cdc42bpbQ7TT50 1713 aa14.15□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Cpsf1Q9EPU4 1441 aaKnown RBP14.15□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Iqgap1Q9JKF1 1657 aaKnown RBP14.15□□□□□ -0.14
Cpsf3-211ENSMUST00000222968 Rgl3Q3UYI5 709 aa14.14□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Rock1P70335 1354 aa14.14□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Sart1Q9Z315 806 aaKnown RBP14.14□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Myom3A2ABU4 1439 aa14.13□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Atp10dQ8K2X1 1416 aa14.13□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Hnrnpul2Q00PI9 745 aaKnown RBP14.12□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Plekhg5Q66T02 1073 aa14.12□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Cwc22Q8C5N3 908 aaKnown RBP14.12□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Clstn2Q9ER65 966 aa14.12□□□□□ -0.15
Cpsf3-211ENSMUST00000222968 Robo2Q7TPD3 1470 aa14.11□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms