RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Fam208aQ69ZR9 1610 aaKnown RBP29.16■■■□□ 2.26
Scn1b-203ENSMUST00000211945 NexmifQ5DTT1 1515 aa29.16■■■□□ 2.26
Scn1b-203ENSMUST00000211945 Lmtk2Q3TYD6 1471 aa29.15■■■□□ 2.26
Scn1b-203ENSMUST00000211945 Arid3cA6PWV5 409 aa29.1■■■□□ 2.25
Scn1b-203ENSMUST00000211945 Ttc37F8VPK0 1563 aa29.02■■■□□ 2.24
Scn1b-203ENSMUST00000211945 Ccnb3Q810T2 1396 aa29■■■□□ 2.23
Scn1b-203ENSMUST00000211945 Rnf17Q99MV7 1640 aa28.98■■■□□ 2.23
Scn1b-203ENSMUST00000211945 Zfyve16Q80U44 1528 aa28.98■■■□□ 2.23
Scn1b-203ENSMUST00000211945 A2mQ6GQT1 1474 aa28.98■■■□□ 2.23
Scn1b-203ENSMUST00000211945 Mlh3A0A1Y7VMP7 1443 aa28.95■■■□□ 2.22
Scn1b-203ENSMUST00000211945 AglF8VPN4 1532 aa28.92■■■□□ 2.22
Scn1b-203ENSMUST00000211945 Depdc5P61460 1591 aa28.91■■■□□ 2.22
Scn1b-203ENSMUST00000211945 Adcy10Q8C0T9 1614 aa28.9■■■□□ 2.22
Scn1b-203ENSMUST00000211945 Caskin1Q6P9K8 1431 aa28.88■■■□□ 2.21
Scn1b-203ENSMUST00000211945 Pdcd11Q6NS46 1862 aaKnown RBP28.88■■■□□ 2.21
Scn1b-203ENSMUST00000211945 AdgbG3UZ78 1657 aa28.85■■■□□ 2.21
Scn1b-203ENSMUST00000211945 Arhgef40Q3UPH7 1517 aa28.85■■■□□ 2.21
Scn1b-203ENSMUST00000211945 Arhgap5P97393 1501 aa28.82■■■□□ 2.2
Scn1b-203ENSMUST00000211945 Abca9Q8K449 1623 aa28.8■■■□□ 2.2
Scn1b-203ENSMUST00000211945 3425401B19RikD3Z1D3 1412 aa28.79■■■□□ 2.2
Scn1b-203ENSMUST00000211945 Gm32742A0A1B0GT42 1604 aa28.78■■■□□ 2.2
Scn1b-203ENSMUST00000211945 Tdrd9Q14BI7 1383 aa28.78■■■□□ 2.2
Scn1b-203ENSMUST00000211945 Cfap74Q3UY96 1578 aa28.76■■■□□ 2.2
Scn1b-203ENSMUST00000211945 Cdk11bP24788 784 aaKnown RBP28.74■■■□□ 2.19
Scn1b-203ENSMUST00000211945 Abcc3B2RX12 1523 aa28.74■■■□□ 2.19
Scn1b-203ENSMUST00000211945 Kdm6bQ5NCY0 1641 aa28.73■■■□□ 2.19
Scn1b-203ENSMUST00000211945 UbtfP25976 765 aaKnown RBP28.7■■■□□ 2.19
Scn1b-203ENSMUST00000211945 Kidins220E9Q9B7 1793 aa28.7■■■□□ 2.19
Scn1b-203ENSMUST00000211945 Trappc8E9PWG2 1437 aa28.69■■■□□ 2.18
Scn1b-203ENSMUST00000211945 Ehmt2Q9Z148 1263 aaKnown RBP28.69■■■□□ 2.18
Scn1b-203ENSMUST00000211945 Kiaa0556Q8C753 1610 aa28.65■■■□□ 2.18
Scn1b-203ENSMUST00000211945 Abcc5Q9R1X5 1436 aa28.64■■■□□ 2.17
Scn1b-203ENSMUST00000211945 Fndc1E9Q043 1732 aa28.62■■■□□ 2.17
Scn1b-203ENSMUST00000211945 Plppr3Q7TPB0 716 aa28.57■■■□□ 2.16
Scn1b-203ENSMUST00000211945 Lemd3Q9WU40 921 aa28.55■■■□□ 2.16
Scn1b-203ENSMUST00000211945 Ncapd3Q6ZQK0 1506 aa28.55■■■□□ 2.16
Scn1b-203ENSMUST00000211945 Plekhh2Q8C115 1491 aa28.54■■■□□ 2.16
Scn1b-203ENSMUST00000211945 Sart1Q9Z315 806 aaKnown RBP28.53■■■□□ 2.16
Scn1b-203ENSMUST00000211945 Hecw1Q8K4P8 1604 aa28.53■■■□□ 2.16
Scn1b-203ENSMUST00000211945 Cdc42bpbQ7TT50 1713 aa28.53■■■□□ 2.16
Scn1b-203ENSMUST00000211945 Mtus2Q3UHD3 1353 aa28.51■■■□□ 2.16
Scn1b-203ENSMUST00000211945 Neurl4Q5NCX5 1563 aa28.51■■■□□ 2.15
Scn1b-203ENSMUST00000211945 Il16O54824 1322 aa28.5■■■□□ 2.15
Scn1b-203ENSMUST00000211945 OvosQ3UU35 1456 aa28.5■■■□□ 2.15
Scn1b-203ENSMUST00000211945 Kdm5cP41230 1554 aa28.5■■■□□ 2.15
Scn1b-203ENSMUST00000211945 Synj2Q9D2G5 1434 aa28.49■■■□□ 2.15
Scn1b-203ENSMUST00000211945 Naip2Q9QUK4 1447 aa28.49■■■□□ 2.15
Scn1b-203ENSMUST00000211945 Dnajc5gQ8C632 165 aa28.48■■■□□ 2.15
Scn1b-203ENSMUST00000211945 Mast1Q9R1L5 1570 aa28.47■■■□□ 2.15
Scn1b-203ENSMUST00000211945 Cabp1Q9JLK7 227 aa28.45■■■□□ 2.15
Scn1b-203ENSMUST00000211945 Hecw2Q6I6G8 1578 aa28.44■■■□□ 2.14
Scn1b-203ENSMUST00000211945 Alpk3Q924C5 1678 aa28.43■■■□□ 2.14
Scn1b-203ENSMUST00000211945 Atp10aO54827 1508 aa28.42■■■□□ 2.14
Scn1b-203ENSMUST00000211945 UacaQ8CGB3 1411 aa28.4■■■□□ 2.14
Scn1b-203ENSMUST00000211945 Fmn2Q9JL04 1578 aa28.39■■■□□ 2.14
Scn1b-203ENSMUST00000211945 SphkapQ6NSW3 1687 aa28.39■■■□□ 2.14
Scn1b-203ENSMUST00000211945 Kdm3bQ6ZPY7 1562 aa28.37■■■□□ 2.13
Scn1b-203ENSMUST00000211945 Cul9Q80TT8 1865 aa28.37■■■□□ 2.13
Scn1b-203ENSMUST00000211945 Prdm16A2A935 1275 aa28.36■■■□□ 2.13
Scn1b-203ENSMUST00000211945 Chic2Q9D9G3 165 aa28.36■■■□□ 2.13
Scn1b-203ENSMUST00000211945 Rfx7F8VPJ6 1459 aa28.36■■■□□ 2.13
Scn1b-203ENSMUST00000211945 Adgrl2Q8JZZ7 1487 aa28.34■■■□□ 2.13
Scn1b-203ENSMUST00000211945 Ptch1Q61115 1434 aa28.33■■■□□ 2.13
Scn1b-203ENSMUST00000211945 RereQ80TZ9 1558 aa28.32■■■□□ 2.12
Scn1b-203ENSMUST00000211945 Dip2cE9PWR4 1557 aa28.32■■■□□ 2.12
Scn1b-203ENSMUST00000211945 Nos1Q9Z0J4 1429 aa28.31■■■□□ 2.12
Scn1b-203ENSMUST00000211945 Mia2Q91ZV0 1396 aa28.3■■■□□ 2.12
Scn1b-203ENSMUST00000211945 Adgrb2Q8CGM1 1561 aa28.3■■■□□ 2.12
Scn1b-203ENSMUST00000211945 Fam50aQ9WV03 339 aaKnown RBP28.3■■■□□ 2.12
Scn1b-203ENSMUST00000211945 Rrp7aQ9D1C9 280 aaKnown RBP28.26■■■□□ 2.11
Scn1b-203ENSMUST00000211945 Map3k5O35099 1380 aa28.26■■■□□ 2.11
Scn1b-203ENSMUST00000211945 Fhad1A6PWD2 1420 aa28.24■■■□□ 2.11
Scn1b-203ENSMUST00000211945 Yeats2Q3TUF7 1407 aa28.24■■■□□ 2.11
Scn1b-203ENSMUST00000211945 Fhod3Q76LL6 1578 aa28.23■■■□□ 2.11
Scn1b-203ENSMUST00000211945 MlecQ6ZQI3 291 aaKnown RBP28.23■■■□□ 2.11
Scn1b-203ENSMUST00000211945 Zmym4A2A791 1549 aaKnown RBP28.21■■■□□ 2.11
Scn1b-203ENSMUST00000211945 NclP09405 707 aaKnown RBP28.2■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Cdc42bpgQ80UW5 1551 aa28.2■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Vps8Q0P5W1 1427 aa28.19■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Xrn1P97789 1719 aaKnown RBP28.19■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Kif14L0N7N1 1674 aaKnown RBP28.18■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Abca17E9PX95 1733 aa28.18■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Dennd4bQ3U1Y4 1499 aa28.16■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Qser1A2BIE1 1698 aa28.16■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Znf518aB2RRF6 1478 aaKnown RBP28.16■■■□□ 2.1
Scn1b-203ENSMUST00000211945 Ssh2Q5SW75 1423 aa28.13■■■□□ 2.09
Scn1b-203ENSMUST00000211945 NpatQ8BMA5 1420 aa28.11■■■□□ 2.09
Scn1b-203ENSMUST00000211945 Trpm1Q2TV84 1622 aa28.11■■■□□ 2.09
Scn1b-203ENSMUST00000211945 Mier1Q5UAK0 511 aa28.1■■■□□ 2.09
Scn1b-203ENSMUST00000211945 Spag9Q58A65 1321 aaKnown RBP28.09■■■□□ 2.09
Scn1b-203ENSMUST00000211945 AlkP97793 1621 aa28.07■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Adamtsl3G3UXC7 1706 aa28.07■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Naip6Q9JIB6 1403 aa28.06■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Plch2A2AP18 1501 aa28.05■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Topbp1Q6ZQF0 1515 aa28.05■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Gli2Q0VGT2 1544 aa28.04■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Cfap65Q3V0B4 1847 aa28.03■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Uggt2E9Q4X2 1504 aa28.03■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Trpm2Q91YD4 1506 aa28.02■■■□□ 2.08
Scn1b-203ENSMUST00000211945 Usp54Q8BL06 1588 aaKnown RBP28.01■■■□□ 2.08
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms