RNA–Protein interactions for RNA: ENSMUST00000192447.5

Pcdha11-203, Transcript of Protocadherin alpha 11, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha11, Length 4,583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-203ENSMUST00000192447 Speer4f1Q9D5Q6 258 aa17.05■□□□□ 0.32
Pcdha11-203ENSMUST00000192447 Atad2bE9Q166 1460 aaKnown RBP17.04■□□□□ 0.32
Pcdha11-203ENSMUST00000192447 Smg6P61406 1418 aaKnown RBP17.04■□□□□ 0.32
Pcdha11-203ENSMUST00000192447 Ccnb3Q810T2 1396 aa17.04■□□□□ 0.32
Pcdha11-203ENSMUST00000192447 Chmp4bQ9D8B3 224 aaKnown RBP17.04■□□□□ 0.32
Pcdha11-203ENSMUST00000192447 NudcO35685 332 aaKnown RBP17.03■□□□□ 0.32
Pcdha11-203ENSMUST00000192447 Smarca4Q3TKT4 1613 aaKnown RBP17.03■□□□□ 0.32
Pcdha11-203ENSMUST00000192447 Cttnbp2B9EJA2 1648 aa17.03■□□□□ 0.32
Pcdha11-203ENSMUST00000192447 UacaQ8CGB3 1411 aa17.01■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Irx3P81067 507 aa17.01■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 EspnQ9ET47 871 aa17■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Nolc1E9Q5C9 702 aaKnown RBP17■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Gtf2e1Q9D0D5 440 aa17■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Ipo9Q91YE6 1041 aa16.99■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Plekhh2Q8C115 1491 aa16.99■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Dnai1Q8C0M8 701 aa16.99■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 PtmaP26350 111 aa16.99■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Nup155Q99P88 1391 aaKnown RBP16.98■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Irx6Q9ER75 438 aa16.98■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Usp47Q8BY87 1376 aa16.97■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 Phldb1Q6PDH0 1371 aaKnown RBP16.96■□□□□ 0.31
Pcdha11-203ENSMUST00000192447 LrpprcQ6PB66 1392 aaKnown RBP16.96■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Iqcf3Q9D498 203 aa16.95■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Ythdc1E9Q5K9 736 aaKnown RBP16.95■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Spryd3E9Q9B3 442 aa16.95■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Srcin1Q9QWI6 1250 aa16.95■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Dhx57Q6P5D3 1388 aaKnown RBP16.94■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 KnstrnQ9D9Z1 312 aaKnown RBP16.94■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Rock2P70336 1388 aa16.94■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Golga2Q921M4 999 aa16.93■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Dcaf11Q91VU6 549 aa16.92■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 1700019A02RikA0A087WPV9 146 aa16.92■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 AknaQ80VW7 1404 aa16.92■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Lmod3E9QA62 571 aa16.91■□□□□ 0.3
Pcdha11-203ENSMUST00000192447 Zfp777B9EKF4 885 aa16.89■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 CrbnQ8C7D2 445 aa16.89■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 U2af1Q9D883 239 aaKnown RBP16.89■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 Slc4a1apE9PX68 744 aa16.87■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 Lemd3Q9WU40 921 aa16.86■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 Ankrd36D3Z4K0 1415 aa16.86■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 Arid3cA6PWV5 409 aa16.85■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 Ipo8Q7TMY7 1010 aa16.85■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 NgefQ8CHT1 710 aa16.85■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 CatipB9EKE5 520 aa16.84■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 HnrnpuQ8VEK3 800 aaKnown RBP16.83■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 Sart1Q9Z315 806 aaKnown RBP16.83■□□□□ 0.29
Pcdha11-203ENSMUST00000192447 AU015836B2RUM3 263 aa16.83■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Stk26Q99JT2 416 aa16.83■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Pank3Q8R2W9 370 aa16.82■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Dhx29Q6PGC1 1365 aaKnown RBP16.82■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Cluap1Q8R3P7 413 aa16.81■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Znf710Q3U288 666 aa16.81■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Kif3bQ61771 747 aa16.81■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Tmco5bQ80X59 307 aa16.81■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Hsp90b1P08113 802 aaKnown RBP16.8■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Top2aQ01320 1528 aaKnown RBP16.79■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Dnttip2Q8R2M2 758 aaKnown RBP16.79■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 ChgaP26339 463 aaKnown RBP16.79■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Casc1Q6TDU8 730 aa16.79■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Iqgap2Q3UQ44 1575 aa16.78■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 U2surpQ6NV83 1029 aaKnown RBP16.78■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Stard8Q8K031 1019 aa16.78■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Dapk1Q80YE7 1442 aa16.77■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 Shroom4Q1W617 1475 aa16.77■□□□□ 0.28
Pcdha11-203ENSMUST00000192447 WrnO09053 1401 aa16.77■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Ksr2Q3UVC0 959 aa16.77■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Inpp5dQ9ES52 1191 aa16.77■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Naip1Q9QWK5 1403 aa16.75■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Fan1Q69ZT1 1020 aa16.75■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Rock1P70335 1354 aa16.75■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Znf330Q922H9 316 aa16.74■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Vps8Q0P5W1 1427 aa16.74■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Mfap1aC0HKD8 439 aaKnown RBP16.73■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Mfap1bC0HKD9 439 aaKnown RBP16.73■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Efcab5A0JP43 1406 aa16.73■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 MccE9PWI3 1003 aa16.73■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Plin1Q8CGN5 517 aa16.73■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Ccar1Q8CH18 1146 aaKnown RBP16.73■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Ncapd3Q6ZQK0 1506 aa16.72■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Cc2d2aQ8CFW7 1633 aa16.72■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Ecm2Q5FW85 670 aa16.72■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Birc3O08863 600 aa16.72■□□□□ 0.27
Pcdha11-203ENSMUST00000192447 Rtf1A2AQ19 715 aaKnown RBP16.7■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 PtmsQ9D0J8 101 aaKnown RBP16.7■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Fam184bQ0KK56 942 aa16.69■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Esx1O88933 382 aa16.69■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Tdrd9Q14BI7 1383 aa16.69■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Arap1Q4LDD4 1452 aa16.68■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Cux1P53564 1515 aa16.68■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Sart3Q9JLI8 962 aaKnown RBP16.68■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Zscan10Q3URR7 782 aa16.67■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Erich6bQ9D4S6 220 aa16.66■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Cc2d2bA0A286YDU8 1405 aa16.66■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Pes1Q9EQ61 584 aaKnown RBP16.65■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Tsen2Q6P7W5 460 aa16.65■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 Spag9Q58A65 1321 aaKnown RBP16.65■□□□□ 0.26
Pcdha11-203ENSMUST00000192447 GorabQ8BRM2 368 aa16.64■□□□□ 0.25
Pcdha11-203ENSMUST00000192447 Rpgrip1lQ8CG73 1264 aa16.64■□□□□ 0.25
Pcdha11-203ENSMUST00000192447 NrkQ9R0G8 1455 aa16.63■□□□□ 0.25
Pcdha11-203ENSMUST00000192447 Zfp644E9QA22 1323 aa16.63■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms