RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 HnrnpuQ8VEK3 800 aaKnown RBP21.59■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Fmn1Q05860 1466 aa21.58■■□□□ 1.05
Shroom3-204ENSMUST00000168878 Fyco1Q8VDC1 1437 aa21.58■■□□□ 1.04
Shroom3-204ENSMUST00000168878 Mak16Q8BGS0 296 aaKnown RBP21.58■■□□□ 1.04
Shroom3-204ENSMUST00000168878 Znf326O88291 580 aa21.57■■□□□ 1.04
Shroom3-204ENSMUST00000168878 Pes1Q9EQ61 584 aaKnown RBP21.57■■□□□ 1.04
Shroom3-204ENSMUST00000168878 PtmsQ9D0J8 101 aaKnown RBP21.54■■□□□ 1.04
Shroom3-204ENSMUST00000168878 Tmf1B9EKI3 1091 aa21.54■■□□□ 1.04
Shroom3-204ENSMUST00000168878 Arhgap35Q91YM2 1499 aa21.54■■□□□ 1.04
Shroom3-204ENSMUST00000168878 Baz1bQ9Z277 1479 aa21.54■■□□□ 1.04
Shroom3-204ENSMUST00000168878 Erich6bQ9D4S6 220 aa21.53■■□□□ 1.04
Shroom3-204ENSMUST00000168878 Mphosph9A6H5Y1 991 aa21.51■■□□□ 1.03
Shroom3-204ENSMUST00000168878 Aebp1Q640N1 1128 aa21.49■■□□□ 1.03
Shroom3-204ENSMUST00000168878 NgefQ8CHT1 710 aa21.49■■□□□ 1.03
Shroom3-204ENSMUST00000168878 Ipo8Q7TMY7 1010 aa21.48■■□□□ 1.03
Shroom3-204ENSMUST00000168878 Ifit1bl1D3Z6F0 470 aa21.47■■□□□ 1.03
Shroom3-204ENSMUST00000168878 Gtf2e1Q9D0D5 440 aa21.46■■□□□ 1.03
Shroom3-204ENSMUST00000168878 Trak1Q6PD31 939 aa21.44■■□□□ 1.02
Shroom3-204ENSMUST00000168878 CntlnA2AM05 1397 aa21.44■■□□□ 1.02
Shroom3-204ENSMUST00000168878 Tnnt2P50752 301 aa21.44■■□□□ 1.02
Shroom3-204ENSMUST00000168878 Rtn4Q99P72 1162 aaKnown RBP21.43■■□□□ 1.02
Shroom3-204ENSMUST00000168878 Golga2Q921M4 999 aa21.42■■□□□ 1.02
Shroom3-204ENSMUST00000168878 Cabp1Q9JLK7 227 aa21.42■■□□□ 1.02
Shroom3-204ENSMUST00000168878 Gm973E9Q295 1059 aa21.41■■□□□ 1.02
Shroom3-204ENSMUST00000168878 Sart3Q9JLI8 962 aaKnown RBP21.4■■□□□ 1.02
Shroom3-204ENSMUST00000168878 U2af1Q9D883 239 aaKnown RBP21.39■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Sh3bp5Q9Z131 463 aa21.39■■□□□ 1.01
Shroom3-204ENSMUST00000168878 U2surpQ6NV83 1029 aaKnown RBP21.37■■□□□ 1.01
Shroom3-204ENSMUST00000168878 MsnP26041 577 aaKnown RBP21.37■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Rtf1A2AQ19 715 aaKnown RBP21.36■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Mfap1aC0HKD8 439 aaKnown RBP21.36■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Mfap1bC0HKD9 439 aaKnown RBP21.36■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Pcmtd1P59913 357 aa21.36■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Cluap1Q8R3P7 413 aa21.36■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Rock2P70336 1388 aa21.35■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Tmco5bQ80X59 307 aa21.35■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Dcaf11Q91VU6 549 aa21.34■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Nolc1E9Q5C9 702 aaKnown RBP21.33■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Pde3bQ61409 1100 aa21.33■■□□□ 1.01
Shroom3-204ENSMUST00000168878 Rrp12Q6P5B0 1295 aaKnown RBP21.31■■□□□ 1
Shroom3-204ENSMUST00000168878 CrbnQ8C7D2 445 aa21.3■■□□□ 1
Shroom3-204ENSMUST00000168878 Clstn1Q9EPL2 979 aa21.3■■□□□ 1
Shroom3-204ENSMUST00000168878 Calcoco2A2A6M5 331 aa21.3■■□□□ 1
Shroom3-204ENSMUST00000168878 Rassf8Q8CJ96 419 aa21.29■■□□□ 1
Shroom3-204ENSMUST00000168878 Rpap1Q80TE0 1409 aa21.29■■□□□ 1
Shroom3-204ENSMUST00000168878 Smg6P61406 1418 aaKnown RBP21.28■■□□□ 1
Shroom3-204ENSMUST00000168878 Srcin1Q9QWI6 1250 aa21.26■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Stk26Q99JT2 416 aa21.26■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Znf330Q922H9 316 aa21.25■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Pds5bQ4VA53 1446 aaKnown RBP21.25■□□□□ 0.99
Shroom3-204ENSMUST00000168878 ChgaP26339 463 aaKnown RBP21.25■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Nup155Q99P88 1391 aaKnown RBP21.25■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Ccar1Q8CH18 1146 aaKnown RBP21.24■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Znf316Q6PGE4 1016 aa21.23■□□□□ 0.99
Shroom3-204ENSMUST00000168878 4933402E13RikQ9D4D2 429 aa21.23■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Anapc15P60007 132 aa21.23■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Plin1Q8CGN5 517 aa21.23■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Plekhh2Q8C115 1491 aa21.22■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Iffo2Q8R2V2 512 aa21.22■□□□□ 0.99
Shroom3-204ENSMUST00000168878 Ksr2Q3UVC0 959 aa21.22■□□□□ 0.99
Shroom3-204ENSMUST00000168878 GorabQ8BRM2 368 aa21.21■□□□□ 0.99
Shroom3-204ENSMUST00000168878 CgnP59242 1191 aa21.2■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Ddrgk1Q80WW9 315 aa21.2■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Smarce1O54941 411 aaKnown RBP21.2■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Q3TQI7 289 aaKnown RBP21.2■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Dhx57Q6P5D3 1388 aaKnown RBP21.19■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Birc3O08863 600 aa21.19■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Slc4a1apE9PX68 744 aa21.18■□□□□ 0.98
Shroom3-204ENSMUST00000168878 RdxP26043 583 aaKnown RBP21.18■□□□□ 0.98
Shroom3-204ENSMUST00000168878 R3hcc1Q8BSI6 488 aa21.18■□□□□ 0.98
Shroom3-204ENSMUST00000168878 SlkO54988 1233 aa21.17■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Rapgef2Q8CHG7 1496 aa21.17■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Gtf3c3Q3TMP1 882 aa21.16■□□□□ 0.98
Shroom3-204ENSMUST00000168878 UacaQ8CGB3 1411 aa21.16■□□□□ 0.98
Shroom3-204ENSMUST00000168878 MecomP14404 1042 aa21.15■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Carmil1Q6EDY6 1374 aa21.15■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Spag9Q58A65 1321 aaKnown RBP21.15■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Lemd3Q9WU40 921 aa21.15■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Stard8Q8K031 1019 aa21.14■□□□□ 0.98
Shroom3-204ENSMUST00000168878 Atp6v1dP57746 247 aa21.14■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Ylpm1Q9R0I7 1386 aaKnown RBP21.14■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Eif4g2Q62448 906 aaKnown RBP21.13■□□□□ 0.97
Shroom3-204ENSMUST00000168878 MyclP10166 368 aa21.13■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Ecm2Q5FW85 670 aa21.13■□□□□ 0.97
Shroom3-204ENSMUST00000168878 CftrP26361 1476 aa21.13■□□□□ 0.97
Shroom3-204ENSMUST00000168878 AknaQ80VW7 1404 aa21.12■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Cald1E9QA15 768 aaKnown RBP21.12■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Usp47Q8BY87 1376 aa21.12■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Ccnb3Q810T2 1396 aa21.11■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Kiaa0754Q69ZZ9 979 aa21.1■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Rsph3aQ3UFY4 516 aa21.1■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Mre11Q61216 706 aa21.1■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Cgnl1Q6AW69 1298 aa21.1■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Becn1O88597 448 aa21.09■□□□□ 0.97
Shroom3-204ENSMUST00000168878 VgfQ0VGU4 617 aa21.09■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Tnnt1O88346 262 aa21.08■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Pank3Q8R2W9 370 aa21.08■□□□□ 0.97
Shroom3-204ENSMUST00000168878 Tpm3-rs7D3Z2H9 248 aa21.07■□□□□ 0.96
Shroom3-204ENSMUST00000168878 Arid3cA6PWV5 409 aa21.06■□□□□ 0.96
Shroom3-204ENSMUST00000168878 Rock1P70335 1354 aa21.06■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms