RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Txndc2Q6P902 515 aa10.28□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Fam193aQ8CGI1 1231 aaKnown RBP10.28□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Nol10Q5RJG1 687 aaKnown RBP10.28□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Znf330Q922H9 316 aa10.27□□□□□ -0.76
Rc3h1-202ENSMUST00000161609 Dhx16G3X8X0 1044 aaKnown RBP10.26□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Hsp90ab1P11499 724 aaKnown RBP10.26□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Sall2Q9QX96 1004 aa10.26□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 CrebrfQ8CDG5 640 aaKnown RBP10.25□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Ddx54Q8K4L0 874 aaKnown RBP10.25□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Erich4Q3UNU4 136 aa10.24□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Mroh3A0A1D5RM54 893 aa10.23□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 BcanQ61361 883 aa10.23□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Cyb5rlB1AS42 316 aa10.22□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Pcgf6Q99NA9 353 aa10.22□□□□□ -0.77
Rc3h1-202ENSMUST00000161609 Rbm5Q91YE7 815 aaKnown RBP10.21□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 CgnP59242 1191 aa10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Tex13c2A0A0G2JGA3 530 aa10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Pus7B7ZNL8 666 aaKnown RBP10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Mapk8ip3Q9ESN9 1337 aa10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Slc4a3P16283 1227 aa10.2□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 B4galnt3Q6L8S8 986 aa10.19□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Kri1Q8VDQ9 704 aaKnown RBP10.19□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Eva1cP58659 440 aa10.19□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 FosbP13346 338 aa10.18□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Themis2Q91YX0 663 aa10.18□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Trim44Q9QXA7 346 aa10.18□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Rtf1A2AQ19 715 aaKnown RBP10.17□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Mrs2Q5NCE8 434 aa10.17□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Podxl2Q8CAE9 603 aa10.17□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Chmp4cQ9D7F7 232 aa10.15□□□□□ -0.78
Rc3h1-202ENSMUST00000161609 Q3TQI7 289 aaKnown RBP10.14□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Eif4g2Q62448 906 aaKnown RBP10.14□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Brpf1B2RRD7 1212 aa10.14□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Tmco5bQ80X59 307 aa10.13□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 AppP12023 770 aa10.13□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Rbm25B2RY56 838 aaKnown RBP10.13□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Bcl2l13P59017 434 aa10.12□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Abl1P00520 1123 aa10.11□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Ppp1r1bQ60829 194 aa10.11□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Cc2d1aQ8K1A6 943 aa10.1□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 A0A0U1RNP2 1173 aa10.1□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Psmd1Q3TXS7 953 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 MecomP14404 1042 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Ccdc43Q9CR29 222 aaKnown RBP10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 IkQ9Z1M8 557 aaKnown RBP10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Tut1Q8R3F9 869 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Krt82Q99M74 516 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Gpatch11Q3UFS4 262 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 Iffo2Q8R2V2 512 aa10.09□□□□□ -0.79
Rc3h1-202ENSMUST00000161609 CanxP35564 591 aaKnown RBP10.07□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Slc4a10Q5DTL9 1118 aa10.06□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Anp32aO35381 247 aa10.06□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Cluap1Q8R3P7 413 aa10.06□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Evi5lH3BKQ3 813 aa10.05□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Ccdc180J3QNE4 1664 aa10.05□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Iqcf3Q9D498 203 aa10.05□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Casc1Q6TDU8 730 aa10.04□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Bicdl1A0JNT9 577 aa10.04□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Rsph6aQ8CDR2 708 aa10.03□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Drc7Q6V3W6 876 aa10.03□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 HdgfP51859 237 aaKnown RBP10.03□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Ccp110Q7TSH4 1004 aa10.03□□□□□ -0.8
Rc3h1-202ENSMUST00000161609 Ccdc9Q8VC31 543 aaKnown RBP10.02□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Ell2Q3UKU1 639 aa10.01□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Calr4Q3TQS0 420 aa10.01□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Zcwpw1Q6IR42 630 aa10□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Frat2Q8K025 231 aa10□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Serpina10Q8R121 448 aa10□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 AknaQ80VW7 1404 aa9.99□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Rad54l2Q99NG0 1466 aa9.99□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 SrrtQ99MR6 875 aaKnown RBP9.99□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Nop9Q8BMC4 636 aaKnown RBP9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Cbx1P83917 185 aaKnown RBP9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Cabp4Q8VHC5 271 aa9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 GorabQ8BRM2 368 aa9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Erich6bQ9D4S6 220 aa9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 CrbnQ8C7D2 445 aa9.98□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Clip1Q922J3 1391 aa9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Odf2A3KGV1 830 aaKnown RBP9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Eif2s2Q99L45 331 aaKnown RBP9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 BlmO88700 1416 aa9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Tpd52l2Q9CYZ2 220 aaKnown RBP9.97□□□□□ -0.81
Rc3h1-202ENSMUST00000161609 Zfp777B9EKF4 885 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Card11Q8CIS0 1159 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Dnai2A2AC93 623 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Plekhg5Q66T02 1073 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Tpd52l1O54818 204 aa9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Utp3Q9JI13 469 aaKnown RBP9.95□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 G430095P16RikE9Q913 147 aa9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Skap1Q3UUV5 355 aa9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Neurod6P48986 337 aa9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 WaplQ65Z40 1200 aaKnown RBP9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Rnf216P58283 853 aa9.94□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Acsbg1Q99PU5 721 aa9.93□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Ap3b2Q9JME5 1082 aa9.93□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Strn4P58404 760 aa9.93□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Egfem1Q8C088 590 aa9.93□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Polr3gQ6NXY9 223 aa9.92□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Clstn2Q9ER65 966 aa9.92□□□□□ -0.82
Rc3h1-202ENSMUST00000161609 Kiaa1211Q5PR69 1207 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 74.4 ms