RNA–Protein interactions for RNA: ENSMUST00000152819.8

Pcdh15-228, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 2,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-228ENSMUST00000152819 Ube2q2Q8K2Z8 378 aa11.43□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Slc4a3P16283 1227 aa11.43□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Pprc1Q6NZN1 1644 aa11.43□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Cul7Q8VE73 1689 aa11.42□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Ncoa1P70365 1447 aa11.42□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Ccnb3Q810T2 1396 aa11.42□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Npm1Q61937 292 aaKnown RBP11.42□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Ccdc27Q3V036 639 aa11.41□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Slc4a1apE9PX68 744 aa11.41□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 PnisrA2AJT4 805 aaKnown RBP11.4□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Unc13aQ4KUS2 1712 aa11.4□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Ercc6F8VPZ5 1481 aa11.4□□□□□ -0.58
Pcdh15-228ENSMUST00000152819 Upf2A2AT37 1269 aaKnown RBP11.38□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Pkd2O35245 966 aa11.37□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Ofd1Q80Z25 1017 aa11.37□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Usp47Q8BY87 1376 aa11.37□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Fhod3Q76LL6 1578 aa11.36□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Ipo9Q91YE6 1041 aa11.36□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Cux2P70298 1426 aa11.36□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 LrpprcQ6PB66 1392 aaKnown RBP11.35□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Duox2A2AQ99 1517 aa11.34□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Tcerg1Q8CGF7 1100 aaKnown RBP11.34□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Kcnh8P59111 1102 aa11.34□□□□□ -0.59
Pcdh15-228ENSMUST00000152819 Rbm10Q99KG3 930 aaKnown RBP11.33□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Cabp1Q9JLK7 227 aa11.33□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Fbxo3Q9DC63 480 aa11.32□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 PogzQ8BZH4 1409 aaKnown RBP11.32□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Polr1aO35134 1717 aaKnown RBP11.32□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 L3mbtl2P59178 703 aa11.32□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Zfp644E9QA22 1323 aa11.32□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Lmtk2Q3TYD6 1471 aa11.32□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 SynmQ70IV5 1561 aa11.31□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Mug1P28665 1476 aa11.3□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Rprd2Q6NXI6 1469 aaKnown RBP11.3□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Ipo4Q8VI75 1082 aa11.3□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Arhgap27A2AB59 869 aa11.3□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 AampJ3QN89 436 aa11.3□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Setbp1Q9Z180 1582 aa11.3□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Ubl4bQ9CQ84 188 aa11.29□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Anp32bQ9EST5 272 aaKnown RBP11.29□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Samd1D3YXK1 519 aa11.29□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Znf326O88291 580 aa11.29□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Cwc22Q8C5N3 908 aaKnown RBP11.29□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Kif27Q7M6Z4 1394 aa11.28□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Hsp90aa1P07901 733 aaKnown RBP11.28□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Plekhg5Q66T02 1073 aa11.28□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 EprsQ8CGC7 1512 aaKnown RBP11.28□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Rad54l2Q99NG0 1466 aa11.27□□□□□ -0.6
Pcdh15-228ENSMUST00000152819 Ift140E9PY46 1464 aa11.27□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Ccdc9Q8VC31 543 aaKnown RBP11.27□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Rfx7F8VPJ6 1459 aa11.27□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Tshz2Q68FE9 1030 aa11.26□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Phldb1Q6PDH0 1371 aaKnown RBP11.25□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Irx3P81067 507 aa11.25□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Rgl3Q3UYI5 709 aa11.25□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 NexmifQ5DTT1 1515 aa11.25□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Samd9lQ69Z37 1561 aa11.24□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Rundc1Q0VDN7 615 aa11.24□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Gpatch8A2A6A1 1505 aa11.24□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Disp1Q3TDN0 1521 aa11.24□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Vgll3P85442 326 aa11.24□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 4930567H17RikQ3V0K5 233 aa11.23□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Dapk1Q80YE7 1442 aa11.23□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Pik3c2gO70167 1506 aa11.23□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Gcc2Q8CHG3 1679 aa11.22□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Abcc5Q9R1X5 1436 aa11.22□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 BC005561E9Q5E2 1589 aa11.22□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Card11Q8CIS0 1159 aa11.21□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 CadpsQ80TJ1 1355 aa11.21□□□□□ -0.61
Pcdh15-228ENSMUST00000152819 Iqcf3Q9D498 203 aa11.21□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 ChgaP26339 463 aaKnown RBP11.2□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Plekhh2Q8C115 1491 aa11.2□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 NeflP08551 543 aa11.2□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Erbb3Q61526 1339 aa11.19□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Myom3A2ABU4 1439 aa11.19□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Kank1E9Q238 1360 aa11.18□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Dhx9O70133 1380 aaKnown RBP11.18□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Rtn4Q99P72 1162 aaKnown RBP11.18□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Mtus2Q3UHD3 1353 aa11.17□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Grwd1Q810D6 446 aaKnown RBP11.17□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 DaxxO35613 739 aa11.16□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 4933416C03RikQ3V063 378 aa11.16□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 NgefQ8CHT1 710 aa11.16□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Rpgrip1lQ8CG73 1264 aa11.15□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Naip6Q9JIB6 1403 aa11.15□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Prkrip1Q9CWV6 186 aaKnown RBP11.15□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Abca5Q8K448 1642 aa11.15□□□□□ -0.62
Pcdh15-228ENSMUST00000152819 Zfp444Q3TDV8 331 aaKnown RBP11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Mink1Q9JM52 1308 aa11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Taok2Q6ZQ29 1240 aa11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Mug2P28666 1451 aa11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Kif21aQ9QXL2 1672 aa11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Mbd5B1AYB6 1498 aa11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Pla2r1Q62028 1487 aa11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Rad21Q61550 635 aaKnown RBP11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Trak1Q6PD31 939 aa11.14□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Arhgef40Q3UPH7 1517 aa11.13□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Dhx57Q6P5D3 1388 aaKnown RBP11.13□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Zscan21Q07231 555 aa11.13□□□□□ -0.63
Pcdh15-228ENSMUST00000152819 Lamc1P02468 1607 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 171.4 ms