RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Plin1Q8CGN5 517 aa15.02■□□□□ -0
Ndc1-204ENSMUST00000139560 Znf330Q922H9 316 aa15.02□□□□□ -0.01
Ndc1-204ENSMUST00000139560 Plcd4Q8K3R3 807 aa15.01□□□□□ -0.01
Ndc1-204ENSMUST00000139560 IbspQ61711 324 aa15□□□□□ -0.01
Ndc1-204ENSMUST00000139560 Trak1Q6PD31 939 aa15□□□□□ -0.01
Ndc1-204ENSMUST00000139560 Rtn4Q99P72 1162 aaKnown RBP14.97□□□□□ -0.01
Ndc1-204ENSMUST00000139560 AknaQ80VW7 1404 aa14.97□□□□□ -0.01
Ndc1-204ENSMUST00000139560 Mia2Q91ZV0 1396 aa14.97□□□□□ -0.01
Ndc1-204ENSMUST00000139560 Zscan21Q07231 555 aa14.97□□□□□ -0.01
Ndc1-204ENSMUST00000139560 Mapk8ip3Q9ESN9 1337 aa14.96□□□□□ -0.01
Ndc1-204ENSMUST00000139560 GorabQ8BRM2 368 aa14.96□□□□□ -0.02
Ndc1-204ENSMUST00000139560 EspnQ9ET47 871 aa14.96□□□□□ -0.02
Ndc1-204ENSMUST00000139560 SlkO54988 1233 aa14.95□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Pds5bQ4VA53 1446 aaKnown RBP14.95□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Mfap1aC0HKD8 439 aaKnown RBP14.95□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Mfap1bC0HKD9 439 aaKnown RBP14.95□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Stk26Q99JT2 416 aa14.94□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Mphosph9A6H5Y1 991 aa14.94□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Znf316Q6PGE4 1016 aa14.94□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Ppp1r18Q8BQ30 594 aa14.94□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Ifit1bl1D3Z6F0 470 aa14.94□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Znf710Q3U288 666 aa14.94□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Tmco5bQ80X59 307 aa14.93□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Rpap1Q80TE0 1409 aa14.93□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Mak16Q8BGS0 296 aaKnown RBP14.93□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Sart3Q9JLI8 962 aaKnown RBP14.93□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Cecr2E9Q2Z1 1453 aa14.92□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Fmn1Q05860 1466 aa14.91□□□□□ -0.02
Ndc1-204ENSMUST00000139560 Cux2P70298 1426 aa14.89□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Ipo8Q7TMY7 1010 aa14.87□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Kcnh8P59111 1102 aa14.87□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Casc1Q6TDU8 730 aa14.87□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Hsp90b1P08113 802 aaKnown RBP14.86□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Pcmtd1P59913 357 aa14.86□□□□□ -0.03
Ndc1-204ENSMUST00000139560 U2surpQ6NV83 1029 aaKnown RBP14.86□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Eif2s2Q99L45 331 aaKnown RBP14.85□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Baz1bQ9Z277 1479 aa14.85□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Smg6P61406 1418 aaKnown RBP14.85□□□□□ -0.03
Ndc1-204ENSMUST00000139560 CftrP26361 1476 aa14.84□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Pknox2Q8BG99 474 aa14.84□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Dcaf11Q91VU6 549 aa14.84□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Ubap1lG3UW59 384 aa14.84□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Map7O88735 730 aa14.84□□□□□ -0.03
Ndc1-204ENSMUST00000139560 Lemd3Q9WU40 921 aa14.84□□□□□ -0.03
Ndc1-204ENSMUST00000139560 U2af1Q9D883 239 aaKnown RBP14.82□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Gpatch11Q3UFS4 262 aa14.82□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Sycp2Q9CUU3 1500 aa14.81□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Samd1D3YXK1 519 aa14.81□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Kif3bQ61771 747 aa14.81□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Znf692Q3U381 531 aa14.8□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Gtf2e1Q9D0D5 440 aa14.8□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Esx1O88933 382 aa14.8□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Fyco1Q8VDC1 1437 aa14.79□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Rapgef2Q8CHG7 1496 aa14.79□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Slc4a1apE9PX68 744 aa14.79□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Tnnt2P50752 301 aa14.79□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Smarca2Q6DIC0 1577 aa14.79□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Golga2Q921M4 999 aa14.78□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Ksr2Q3UVC0 959 aa14.78□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Pibf1E9Q6K3 756 aa14.78□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Birc3O08863 600 aa14.78□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Clstn1Q9EPL2 979 aa14.78□□□□□ -0.04
Ndc1-204ENSMUST00000139560 Rfx1P48377 963 aa14.76□□□□□ -0.05
Ndc1-204ENSMUST00000139560 CntlnA2AM05 1397 aa14.76□□□□□ -0.05
Ndc1-204ENSMUST00000139560 KnstrnQ9D9Z1 312 aaKnown RBP14.76□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Mbd3Q9Z2D8 285 aaKnown RBP14.76□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Sox12Q04890 314 aa14.75□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Sart1Q9Z315 806 aaKnown RBP14.75□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Iqcf3Q9D498 203 aa14.75□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Inpp5dQ9ES52 1191 aa14.74□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Ak7Q9D2H2 614 aa14.73□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Chmp4cQ9D7F7 232 aa14.73□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Tmf1B9EKI3 1091 aa14.73□□□□□ -0.05
Ndc1-204ENSMUST00000139560 NudcO35685 332 aaKnown RBP14.73□□□□□ -0.05
Ndc1-204ENSMUST00000139560 CgnP59242 1191 aa14.72□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Pank3Q8R2W9 370 aa14.72□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Srcin1Q9QWI6 1250 aa14.72□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Fhad1A6PWD2 1420 aa14.72□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Txndc2Q6P902 515 aa14.71□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Slc4a2P13808 1237 aaKnown RBP14.71□□□□□ -0.05
Ndc1-204ENSMUST00000139560 MsnP26041 577 aaKnown RBP14.71□□□□□ -0.05
Ndc1-204ENSMUST00000139560 Fan1Q69ZT1 1020 aa14.7□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Tnnt1O88346 262 aa14.7□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Ccdc146E9Q9F7 977 aa14.69□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Ccnb3Q810T2 1396 aa14.69□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Nup155Q99P88 1391 aaKnown RBP14.69□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Pes1Q9EQ61 584 aaKnown RBP14.68□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Phldb1Q6PDH0 1371 aaKnown RBP14.68□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Arhgap35Q91YM2 1499 aa14.68□□□□□ -0.06
Ndc1-204ENSMUST00000139560 CrebrfQ8CDG5 640 aaKnown RBP14.68□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Rpgrip1lQ8CG73 1264 aa14.68□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Carmil1Q6EDY6 1374 aa14.67□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Ttll13A4Q9F6 804 aa14.67□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Rrp12Q6P5B0 1295 aaKnown RBP14.67□□□□□ -0.06
Ndc1-204ENSMUST00000139560 KarsQ99MN1 595 aaKnown RBP14.67□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Usp47Q8BY87 1376 aa14.67□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Psme1P97371 249 aa14.67□□□□□ -0.06
Ndc1-204ENSMUST00000139560 MlecQ6ZQI3 291 aaKnown RBP14.66□□□□□ -0.06
Ndc1-204ENSMUST00000139560 Synj1Q8CHC4 1574 aa14.65□□□□□ -0.06
Ndc1-204ENSMUST00000139560 LrpprcQ6PB66 1392 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms