RNA–Protein interactions for RNA: ENSMUST00000134009.8

Pcdh15-217, Transcript of Protocadherin-15, mousemouse

TSL 1 (best) BASIC

Gene Pcdh15, Length 3,300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-217ENSMUST00000134009 Rfx7F8VPJ6 1459 aa9.48□□□□□ -0.89
Pcdh15-217ENSMUST00000134009 Gm14025A2AP89 1413 aa9.48□□□□□ -0.89
Pcdh15-217ENSMUST00000134009 Abcc5Q9R1X5 1436 aa9.47□□□□□ -0.89
Pcdh15-217ENSMUST00000134009 Zcchc11B2RX14 1644 aaKnown RBP9.47□□□□□ -0.89
Pcdh15-217ENSMUST00000134009 Arhgef11Q68FM7 1552 aa9.46□□□□□ -0.89
Pcdh15-217ENSMUST00000134009 Il16O54824 1322 aa9.46□□□□□ -0.89
Pcdh15-217ENSMUST00000134009 Hspa5P20029 655 aaKnown RBP9.46□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Mlh3A0A1Y7VMP7 1443 aa9.45□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Mphosph9A6H5Y1 991 aa9.45□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Arhgef12Q8R4H2 1543 aaKnown RBP9.45□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Kiaa1551Q5DTW7 1521 aa9.45□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Dnmt1P13864 1620 aaKnown RBP9.45□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Mapkbp1Q6NS57 1503 aa9.44□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Tdrd9Q14BI7 1383 aa9.44□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Rrbp1Q99PL5 1605 aaKnown RBP9.43□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Caskin1Q6P9K8 1431 aa9.43□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Fancd2Q80V62 1450 aa9.43□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Arhgef40Q3UPH7 1517 aa9.42□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Ppargc1bQ8VHJ7 1014 aa9.42□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Pelp1Q9DBD5 1123 aaKnown RBP9.42□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Wdr7Q920I9 1489 aa9.42□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Cul7Q8VE73 1689 aa9.4□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Prex2Q3LAC4 1598 aa9.4□□□□□ -0.9
Pcdh15-217ENSMUST00000134009 Adcy10Q8C0T9 1614 aa9.4□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Pkd2O35245 966 aa9.39□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Clstn2Q9ER65 966 aa9.39□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Abcc1O35379 1528 aa9.39□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Hecw1Q8K4P8 1604 aa9.38□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Nop58Q6DFW4 536 aaKnown RBP9.37□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Ifnlr1Q8CGK5 535 aa9.37□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Dennd4bQ3U1Y4 1499 aa9.37□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Mroh2aD3Z750 1679 aa9.37□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Gm13697A2AK42 830 aa9.37□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Cdc42bpaQ3UU96 1719 aa9.37□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Kiaa0556Q8C753 1610 aa9.37□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Igf1rQ60751 1373 aa9.36□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Neurod1Q60867 357 aa9.36□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Zfp644E9QA22 1323 aa9.36□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Rrp7aQ9D1C9 280 aaKnown RBP9.36□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Kdm3bQ6ZPY7 1562 aa9.36□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Setbp1Q9Z180 1582 aa9.36□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Arhgap5P97393 1501 aa9.36□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Nup155Q99P88 1391 aaKnown RBP9.35□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Lamc1P02468 1607 aaKnown RBP9.34□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Sart1Q9Z315 806 aaKnown RBP9.34□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Map4P27546 1125 aaKnown RBP9.34□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Pabpn1Q8CCS6 302 aaKnown RBP9.34□□□□□ -0.91
Pcdh15-217ENSMUST00000134009 Mast1Q9R1L5 1570 aa9.33□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Usp47Q8BY87 1376 aa9.33□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Kdm6bQ5NCY0 1641 aa9.33□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Atp10dQ8K2X1 1416 aa9.33□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Trak1Q6PD31 939 aa9.32□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Naip5Q9R016 1403 aa9.32□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Ythdc2B2RR83 1445 aaKnown RBP9.32□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Camsap2Q8C1B1 1461 aa9.31□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Adgrb2Q8CGM1 1561 aa9.31□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Zbtb7cQ8VCZ7 619 aa9.31□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Prdm16A2A935 1275 aa9.3□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Cfap65Q3V0B4 1847 aa9.3□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Fam208aQ69ZR9 1610 aaKnown RBP9.3□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Hdac5Q9Z2V6 1113 aa9.3□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Ttll5Q8CHB8 1328 aa9.3□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Cfap74Q3UY96 1578 aa9.29□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Rprd2Q6NXI6 1469 aaKnown RBP9.29□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Adgrl2Q8JZZ7 1487 aa9.29□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Trappc8E9PWG2 1437 aa9.28□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Hnrnpul2Q00PI9 745 aaKnown RBP9.28□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Rgl3Q3UYI5 709 aa9.28□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Rnf17Q99MV7 1640 aa9.28□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 SphkapQ6NSW3 1687 aa9.28□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 Chd1P40201 1711 aa9.27□□□□□ -0.92
Pcdh15-217ENSMUST00000134009 AlkP97793 1621 aa9.27□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Arid3cA6PWV5 409 aa9.27□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Pik3c2gO70167 1506 aa9.27□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Fmn2Q9JL04 1578 aa9.27□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Gapvd1Q6PAR5 1458 aa9.26□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 DroshaQ5HZJ0 1373 aaKnown RBP9.26□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 NhsB1AV60 1647 aa9.26□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Abca17E9PX95 1733 aa9.26□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Spag9Q58A65 1321 aaKnown RBP9.26□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Lemd3Q9WU40 921 aa9.26□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Stra8P70278 393 aa9.25□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Dhx9O70133 1380 aaKnown RBP9.25□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Mapk8ip2Q9ERE9 830 aa9.25□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Prdm2A2A7B5 1709 aaKnown RBP9.24□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Lrrc9Q8CDN9 1456 aa9.23□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Ssh2Q5SW75 1423 aa9.23□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Sin3aQ60520 1274 aaKnown RBP9.23□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Cwc22Q8C5N3 908 aaKnown RBP9.23□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 AI481877A2ALV5 1481 aa9.22□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Gm32742A0A1B0GT42 1604 aa9.22□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Abca8bQ8K440 1620 aa9.21□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 PtprtQ99M80 1454 aa9.21□□□□□ -0.93
Pcdh15-217ENSMUST00000134009 Trpm2Q91YD4 1506 aa9.21□□□□□ -0.94
Pcdh15-217ENSMUST00000134009 Map3k5O35099 1380 aa9.21□□□□□ -0.94
Pcdh15-217ENSMUST00000134009 Cd109Q8R422 1442 aa9.21□□□□□ -0.94
Pcdh15-217ENSMUST00000134009 Abcc3B2RX12 1523 aa9.2□□□□□ -0.94
Pcdh15-217ENSMUST00000134009 Pde4cQ3UEI1 686 aa9.2□□□□□ -0.94
Pcdh15-217ENSMUST00000134009 Anks4bQ8K3X6 423 aa9.2□□□□□ -0.94
Pcdh15-217ENSMUST00000134009 PtprgQ05909 1442 aa9.2□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms