RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Supt5hO55201 1082 aaKnown RBP37,65■■■■□ 3,62
Tpm1-216ENSMUST00000113707 Fkbp15Q6P9Q6 1216 aaKnown RBP37,64■■■■□ 3,62
Tpm1-216ENSMUST00000113707 Ankrd36D3Z4K0 1415 aa37,63■■■■□ 3,61
Tpm1-216ENSMUST00000113707 Kdm6bQ5NCY0 1641 aa37,63■■■■□ 3,61
Tpm1-216ENSMUST00000113707 Dennd4bQ3U1Y4 1499 aa37,62■■■■□ 3,61
Tpm1-216ENSMUST00000113707 Mlh3A0A1Y7VMP7 1443 aa37,62■■■■□ 3,61
Tpm1-216ENSMUST00000113707 Cabp1Q9JLK7 227 aa37,57■■■■□ 3,6
Tpm1-216ENSMUST00000113707 Cdk11bP24788 784 aaKnown RBP37,56■■■■□ 3,6
Tpm1-216ENSMUST00000113707 Mtus2Q3UHD3 1353 aa37,56■■■■□ 3,6
Tpm1-216ENSMUST00000113707 Caskin1Q6P9K8 1431 aa37,56■■■■□ 3,6
Tpm1-216ENSMUST00000113707 Fhod3Q76LL6 1578 aa37,55■■■■□ 3,6
Tpm1-216ENSMUST00000113707 Fam208aQ69ZR9 1610 aaKnown RBP37,53■■■■□ 3,6
Tpm1-216ENSMUST00000113707 Il16O54824 1322 aa37,51■■■■□ 3,6
Tpm1-216ENSMUST00000113707 Cul7Q8VE73 1689 aa37,51■■■■□ 3,6
Tpm1-216ENSMUST00000113707 Kiaa1210E9Q0C6 1637 aa37,49■■■■□ 3,59
Tpm1-216ENSMUST00000113707 NclP09405 707 aaKnown RBP37,49■■■■□ 3,59
Tpm1-216ENSMUST00000113707 NhsB1AV60 1647 aa37,46■■■■□ 3,59
Tpm1-216ENSMUST00000113707 Wdr7Q920I9 1489 aa37,44■■■■□ 3,58
Tpm1-216ENSMUST00000113707 Ube2uB1AUC4 352 aa37,43■■■■□ 3,58
Tpm1-216ENSMUST00000113707 Tdrd9Q14BI7 1383 aa37,42■■■■□ 3,58
Tpm1-216ENSMUST00000113707 Kdm3bQ6ZPY7 1562 aa37,42■■■■□ 3,58
Tpm1-216ENSMUST00000113707 SphkapQ6NSW3 1687 aa37,38■■■■□ 3,57
Tpm1-216ENSMUST00000113707 Aebp2Q9Z248 504 aaKnown RBP37,35■■■■□ 3,57
Tpm1-216ENSMUST00000113707 Rnf17Q99MV7 1640 aa37,33■■■■□ 3,57
Tpm1-216ENSMUST00000113707 Wdr66E9Q743 1299 aa37,29■■■■□ 3,56
Tpm1-216ENSMUST00000113707 Ythdc2B2RR83 1445 aaKnown RBP37,29■■■■□ 3,56
Tpm1-216ENSMUST00000113707 Igf1rQ60751 1373 aa37,28■■■■□ 3,56
Tpm1-216ENSMUST00000113707 Sall2Q9QX96 1004 aa37,27■■■■□ 3,56
Tpm1-216ENSMUST00000113707 Adgrb2Q8CGM1 1561 aa37,26■■■■□ 3,56
Tpm1-216ENSMUST00000113707 Arhgap5P97393 1501 aa37,24■■■■□ 3,55
Tpm1-216ENSMUST00000113707 Pelp1Q9DBD5 1123 aaKnown RBP37,24■■■■□ 3,55
Tpm1-216ENSMUST00000113707 Mphosph9A6H5Y1 991 aa37,24■■■■□ 3,55
Tpm1-216ENSMUST00000113707 Setbp1Q9Z180 1582 aa37,23■■■■□ 3,55
Tpm1-216ENSMUST00000113707 Abca8bQ8K440 1620 aa37,23■■■■□ 3,55
Tpm1-216ENSMUST00000113707 Atp10dQ8K2X1 1416 aa37,22■■■■□ 3,55
Tpm1-216ENSMUST00000113707 Gm32742A0A1B0GT42 1604 aa37,2■■■■□ 3,55
Tpm1-216ENSMUST00000113707 Gapvd1Q6PAR5 1458 aa37,18■■■■□ 3,54
Tpm1-216ENSMUST00000113707 Hspa5P20029 655 aaKnown RBP37,18■■■■□ 3,54
Tpm1-216ENSMUST00000113707 Cfap74Q3UY96 1578 aa37,18■■■■□ 3,54
Tpm1-216ENSMUST00000113707 Pabpn1Q8CCS6 302 aaKnown RBP37,18■■■■□ 3,54
Tpm1-216ENSMUST00000113707 Fmn2Q9JL04 1578 aa37,17■■■■□ 3,54
Tpm1-216ENSMUST00000113707 ClspnQ80YR7 1315 aa37,17■■■■□ 3,54
Tpm1-216ENSMUST00000113707 Pdcd11Q6NS46 1862 aaKnown RBP37,16■■■■□ 3,54
Tpm1-216ENSMUST00000113707 AlkP97793 1621 aa37,14■■■■□ 3,54
Tpm1-216ENSMUST00000113707 PtprtQ99M80 1454 aa37,14■■■■□ 3,54
Tpm1-216ENSMUST00000113707 Lamc1P02468 1607 aaKnown RBP37,13■■■■□ 3,53
Tpm1-216ENSMUST00000113707 Zfp644E9QA22 1323 aa37,11■■■■□ 3,53
Tpm1-216ENSMUST00000113707 Adgrl2Q8JZZ7 1487 aa37,06■■■■□ 3,52
Tpm1-216ENSMUST00000113707 Trappc8E9PWG2 1437 aa37,05■■■■□ 3,52
Tpm1-216ENSMUST00000113707 Mast1Q9R1L5 1570 aa37,05■■■■□ 3,52
Tpm1-216ENSMUST00000113707 AI481877A2ALV5 1481 aa37,03■■■■□ 3,52
Tpm1-216ENSMUST00000113707 Neurl4Q5NCX5 1563 aa37,03■■■■□ 3,52
Tpm1-216ENSMUST00000113707 Kif21bQ9QXL1 1668 aa37,02■■■■□ 3,52
Tpm1-216ENSMUST00000113707 Znf608Q56A10 1511 aa37,02■■■■□ 3,52
Tpm1-216ENSMUST00000113707 Abcc3B2RX12 1523 aa37,01■■■■□ 3,51
Tpm1-216ENSMUST00000113707 Lrrc9Q8CDN9 1456 aa37■■■■□ 3,51
Tpm1-216ENSMUST00000113707 Hecw1Q8K4P8 1604 aa36,99■■■■□ 3,51
Tpm1-216ENSMUST00000113707 Cep170Q6A065 1588 aa36,98■■■■□ 3,51
Tpm1-216ENSMUST00000113707 Trpm2Q91YD4 1506 aa36,98■■■■□ 3,51
Tpm1-216ENSMUST00000113707 Naip5Q9R016 1403 aa36,96■■■■□ 3,51
Tpm1-216ENSMUST00000113707 Sart1Q9Z315 806 aaKnown RBP36,95■■■■□ 3,51
Tpm1-216ENSMUST00000113707 Pkd2O35245 966 aa36,94■■■■□ 3,5
Tpm1-216ENSMUST00000113707 Camsap2Q8C1B1 1461 aa36,93■■■■□ 3,5
Tpm1-216ENSMUST00000113707 Ifnlr1Q8CGK5 535 aa36,93■■■■□ 3,5
Tpm1-216ENSMUST00000113707 Nup155Q99P88 1391 aaKnown RBP36,9■■■■□ 3,5
Tpm1-216ENSMUST00000113707 Rprd2Q6NXI6 1469 aaKnown RBP36,86■■■■□ 3,49
Tpm1-216ENSMUST00000113707 Rrp7aQ9D1C9 280 aaKnown RBP36,85■■■■□ 3,49
Tpm1-216ENSMUST00000113707 Ttll5Q8CHB8 1328 aa36,84■■■■□ 3,49
Tpm1-216ENSMUST00000113707 Supt6hQ62383 1726 aaKnown RBP36,82■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Cdc42bpbQ7TT50 1713 aa36,82■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Zfyve16Q80U44 1528 aa36,82■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Pik3c2gO70167 1506 aa36,81■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Kidins220E9Q9B7 1793 aa36,8■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Ssh2Q5SW75 1423 aa36,8■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Usp47Q8BY87 1376 aa36,79■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Prdm16A2A935 1275 aa36,78■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Pprc1Q6NZN1 1644 aa36,77■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Clstn2Q9ER65 966 aa36,76■■■■□ 3,48
Tpm1-216ENSMUST00000113707 Map4P27546 1125 aaKnown RBP36,75■■■■□ 3,47
Tpm1-216ENSMUST00000113707 Arid3cA6PWV5 409 aa36,73■■■■□ 3,47
Tpm1-216ENSMUST00000113707 Ppargc1bQ8VHJ7 1014 aa36,71■■■■□ 3,47
Tpm1-216ENSMUST00000113707 Trak1Q6PD31 939 aa36,7■■■■□ 3,47
Tpm1-216ENSMUST00000113707 Gm156Q58A37 223 aa36,68■■■■□ 3,46
Tpm1-216ENSMUST00000113707 Abca9Q8K449 1623 aa36,68■■■■□ 3,46
Tpm1-216ENSMUST00000113707 Dhx9O70133 1380 aaKnown RBP36,66■■■■□ 3,46
Tpm1-216ENSMUST00000113707 DroshaQ5HZJ0 1373 aaKnown RBP36,66■■■■□ 3,46
Tpm1-216ENSMUST00000113707 Gm13697A2AK42 830 aa36,65■■■■□ 3,46
Tpm1-216ENSMUST00000113707 PtprgQ05909 1442 aa36,65■■■■□ 3,46
Tpm1-216ENSMUST00000113707 Spag9Q58A65 1321 aaKnown RBP36,59■■■■□ 3,45
Tpm1-216ENSMUST00000113707 Map3k5O35099 1380 aa36,55■■■■□ 3,44
Tpm1-216ENSMUST00000113707 Asxl1P59598 1514 aa36,54■■■■□ 3,44
Tpm1-216ENSMUST00000113707 Abca17E9PX95 1733 aa36,53■■■■□ 3,44
Tpm1-216ENSMUST00000113707 Ak9G3UYQ4 1894 aa36,53■■■■□ 3,44
Tpm1-216ENSMUST00000113707 Adgrl3Q80TS3 1537 aa36,53■■■■□ 3,44
Tpm1-216ENSMUST00000113707 Lemd3Q9WU40 921 aa36,52■■■■□ 3,44
Tpm1-216ENSMUST00000113707 Kif14L0N7N1 1674 aaKnown RBP36,51■■■■□ 3,44
Tpm1-216ENSMUST00000113707 Zbtb7cQ8VCZ7 619 aa36,46■■■■□ 3,43
Tpm1-216ENSMUST00000113707 Cd109Q8R422 1442 aa36,45■■■■□ 3,43
Tpm1-216ENSMUST00000113707 Xrn1P97789 1719 aaKnown RBP36,44■■■■□ 3,42
Tpm1-216ENSMUST00000113707 Usp54Q8BL06 1588 aaKnown RBP36,44■■■■□ 3,42
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms