RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Supt5hO55201 1082 aaKnown RBP37.65■■■■□ 3.62
Tpm1-216ENSMUST00000113707 Fkbp15Q6P9Q6 1216 aaKnown RBP37.64■■■■□ 3.62
Tpm1-216ENSMUST00000113707 Ankrd36D3Z4K0 1415 aa37.63■■■■□ 3.61
Tpm1-216ENSMUST00000113707 Kdm6bQ5NCY0 1641 aa37.63■■■■□ 3.61
Tpm1-216ENSMUST00000113707 Dennd4bQ3U1Y4 1499 aa37.62■■■■□ 3.61
Tpm1-216ENSMUST00000113707 Mlh3A0A1Y7VMP7 1443 aa37.62■■■■□ 3.61
Tpm1-216ENSMUST00000113707 Cabp1Q9JLK7 227 aa37.57■■■■□ 3.6
Tpm1-216ENSMUST00000113707 Cdk11bP24788 784 aaKnown RBP37.56■■■■□ 3.6
Tpm1-216ENSMUST00000113707 Mtus2Q3UHD3 1353 aa37.56■■■■□ 3.6
Tpm1-216ENSMUST00000113707 Caskin1Q6P9K8 1431 aa37.56■■■■□ 3.6
Tpm1-216ENSMUST00000113707 Fhod3Q76LL6 1578 aa37.55■■■■□ 3.6
Tpm1-216ENSMUST00000113707 Fam208aQ69ZR9 1610 aaKnown RBP37.53■■■■□ 3.6
Tpm1-216ENSMUST00000113707 Il16O54824 1322 aa37.51■■■■□ 3.6
Tpm1-216ENSMUST00000113707 Cul7Q8VE73 1689 aa37.51■■■■□ 3.6
Tpm1-216ENSMUST00000113707 Kiaa1210E9Q0C6 1637 aa37.49■■■■□ 3.59
Tpm1-216ENSMUST00000113707 NclP09405 707 aaKnown RBP37.49■■■■□ 3.59
Tpm1-216ENSMUST00000113707 NhsB1AV60 1647 aa37.46■■■■□ 3.59
Tpm1-216ENSMUST00000113707 Wdr7Q920I9 1489 aa37.44■■■■□ 3.58
Tpm1-216ENSMUST00000113707 Ube2uB1AUC4 352 aa37.43■■■■□ 3.58
Tpm1-216ENSMUST00000113707 Tdrd9Q14BI7 1383 aa37.42■■■■□ 3.58
Tpm1-216ENSMUST00000113707 Kdm3bQ6ZPY7 1562 aa37.42■■■■□ 3.58
Tpm1-216ENSMUST00000113707 SphkapQ6NSW3 1687 aa37.38■■■■□ 3.57
Tpm1-216ENSMUST00000113707 Aebp2Q9Z248 504 aaKnown RBP37.35■■■■□ 3.57
Tpm1-216ENSMUST00000113707 Rnf17Q99MV7 1640 aa37.33■■■■□ 3.57
Tpm1-216ENSMUST00000113707 Wdr66E9Q743 1299 aa37.29■■■■□ 3.56
Tpm1-216ENSMUST00000113707 Ythdc2B2RR83 1445 aaKnown RBP37.29■■■■□ 3.56
Tpm1-216ENSMUST00000113707 Igf1rQ60751 1373 aa37.28■■■■□ 3.56
Tpm1-216ENSMUST00000113707 Sall2Q9QX96 1004 aa37.27■■■■□ 3.56
Tpm1-216ENSMUST00000113707 Adgrb2Q8CGM1 1561 aa37.26■■■■□ 3.56
Tpm1-216ENSMUST00000113707 Arhgap5P97393 1501 aa37.24■■■■□ 3.55
Tpm1-216ENSMUST00000113707 Pelp1Q9DBD5 1123 aaKnown RBP37.24■■■■□ 3.55
Tpm1-216ENSMUST00000113707 Mphosph9A6H5Y1 991 aa37.24■■■■□ 3.55
Tpm1-216ENSMUST00000113707 Setbp1Q9Z180 1582 aa37.23■■■■□ 3.55
Tpm1-216ENSMUST00000113707 Abca8bQ8K440 1620 aa37.23■■■■□ 3.55
Tpm1-216ENSMUST00000113707 Atp10dQ8K2X1 1416 aa37.22■■■■□ 3.55
Tpm1-216ENSMUST00000113707 Gm32742A0A1B0GT42 1604 aa37.2■■■■□ 3.55
Tpm1-216ENSMUST00000113707 Gapvd1Q6PAR5 1458 aa37.18■■■■□ 3.54
Tpm1-216ENSMUST00000113707 Hspa5P20029 655 aaKnown RBP37.18■■■■□ 3.54
Tpm1-216ENSMUST00000113707 Cfap74Q3UY96 1578 aa37.18■■■■□ 3.54
Tpm1-216ENSMUST00000113707 Pabpn1Q8CCS6 302 aaKnown RBP37.18■■■■□ 3.54
Tpm1-216ENSMUST00000113707 Fmn2Q9JL04 1578 aa37.17■■■■□ 3.54
Tpm1-216ENSMUST00000113707 ClspnQ80YR7 1315 aa37.17■■■■□ 3.54
Tpm1-216ENSMUST00000113707 Pdcd11Q6NS46 1862 aaKnown RBP37.16■■■■□ 3.54
Tpm1-216ENSMUST00000113707 AlkP97793 1621 aa37.14■■■■□ 3.54
Tpm1-216ENSMUST00000113707 PtprtQ99M80 1454 aa37.14■■■■□ 3.54
Tpm1-216ENSMUST00000113707 Lamc1P02468 1607 aaKnown RBP37.13■■■■□ 3.53
Tpm1-216ENSMUST00000113707 Zfp644E9QA22 1323 aa37.11■■■■□ 3.53
Tpm1-216ENSMUST00000113707 Adgrl2Q8JZZ7 1487 aa37.06■■■■□ 3.52
Tpm1-216ENSMUST00000113707 Trappc8E9PWG2 1437 aa37.05■■■■□ 3.52
Tpm1-216ENSMUST00000113707 Mast1Q9R1L5 1570 aa37.05■■■■□ 3.52
Tpm1-216ENSMUST00000113707 AI481877A2ALV5 1481 aa37.03■■■■□ 3.52
Tpm1-216ENSMUST00000113707 Neurl4Q5NCX5 1563 aa37.03■■■■□ 3.52
Tpm1-216ENSMUST00000113707 Kif21bQ9QXL1 1668 aa37.02■■■■□ 3.52
Tpm1-216ENSMUST00000113707 Znf608Q56A10 1511 aa37.02■■■■□ 3.52
Tpm1-216ENSMUST00000113707 Abcc3B2RX12 1523 aa37.01■■■■□ 3.51
Tpm1-216ENSMUST00000113707 Lrrc9Q8CDN9 1456 aa37■■■■□ 3.51
Tpm1-216ENSMUST00000113707 Hecw1Q8K4P8 1604 aa36.99■■■■□ 3.51
Tpm1-216ENSMUST00000113707 Cep170Q6A065 1588 aa36.98■■■■□ 3.51
Tpm1-216ENSMUST00000113707 Trpm2Q91YD4 1506 aa36.98■■■■□ 3.51
Tpm1-216ENSMUST00000113707 Naip5Q9R016 1403 aa36.96■■■■□ 3.51
Tpm1-216ENSMUST00000113707 Sart1Q9Z315 806 aaKnown RBP36.95■■■■□ 3.51
Tpm1-216ENSMUST00000113707 Pkd2O35245 966 aa36.94■■■■□ 3.5
Tpm1-216ENSMUST00000113707 Camsap2Q8C1B1 1461 aa36.93■■■■□ 3.5
Tpm1-216ENSMUST00000113707 Ifnlr1Q8CGK5 535 aa36.93■■■■□ 3.5
Tpm1-216ENSMUST00000113707 Nup155Q99P88 1391 aaKnown RBP36.9■■■■□ 3.5
Tpm1-216ENSMUST00000113707 Rprd2Q6NXI6 1469 aaKnown RBP36.86■■■■□ 3.49
Tpm1-216ENSMUST00000113707 Rrp7aQ9D1C9 280 aaKnown RBP36.85■■■■□ 3.49
Tpm1-216ENSMUST00000113707 Ttll5Q8CHB8 1328 aa36.84■■■■□ 3.49
Tpm1-216ENSMUST00000113707 Supt6hQ62383 1726 aaKnown RBP36.82■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Cdc42bpbQ7TT50 1713 aa36.82■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Zfyve16Q80U44 1528 aa36.82■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Pik3c2gO70167 1506 aa36.81■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Kidins220E9Q9B7 1793 aa36.8■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Ssh2Q5SW75 1423 aa36.8■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Usp47Q8BY87 1376 aa36.79■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Prdm16A2A935 1275 aa36.78■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Pprc1Q6NZN1 1644 aa36.77■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Clstn2Q9ER65 966 aa36.76■■■■□ 3.48
Tpm1-216ENSMUST00000113707 Map4P27546 1125 aaKnown RBP36.75■■■■□ 3.47
Tpm1-216ENSMUST00000113707 Arid3cA6PWV5 409 aa36.73■■■■□ 3.47
Tpm1-216ENSMUST00000113707 Ppargc1bQ8VHJ7 1014 aa36.71■■■■□ 3.47
Tpm1-216ENSMUST00000113707 Trak1Q6PD31 939 aa36.7■■■■□ 3.47
Tpm1-216ENSMUST00000113707 Gm156Q58A37 223 aa36.68■■■■□ 3.46
Tpm1-216ENSMUST00000113707 Abca9Q8K449 1623 aa36.68■■■■□ 3.46
Tpm1-216ENSMUST00000113707 Dhx9O70133 1380 aaKnown RBP36.66■■■■□ 3.46
Tpm1-216ENSMUST00000113707 DroshaQ5HZJ0 1373 aaKnown RBP36.66■■■■□ 3.46
Tpm1-216ENSMUST00000113707 Gm13697A2AK42 830 aa36.65■■■■□ 3.46
Tpm1-216ENSMUST00000113707 PtprgQ05909 1442 aa36.65■■■■□ 3.46
Tpm1-216ENSMUST00000113707 Spag9Q58A65 1321 aaKnown RBP36.59■■■■□ 3.45
Tpm1-216ENSMUST00000113707 Map3k5O35099 1380 aa36.55■■■■□ 3.44
Tpm1-216ENSMUST00000113707 Asxl1P59598 1514 aa36.54■■■■□ 3.44
Tpm1-216ENSMUST00000113707 Abca17E9PX95 1733 aa36.53■■■■□ 3.44
Tpm1-216ENSMUST00000113707 Ak9G3UYQ4 1894 aa36.53■■■■□ 3.44
Tpm1-216ENSMUST00000113707 Adgrl3Q80TS3 1537 aa36.53■■■■□ 3.44
Tpm1-216ENSMUST00000113707 Lemd3Q9WU40 921 aa36.52■■■■□ 3.44
Tpm1-216ENSMUST00000113707 Kif14L0N7N1 1674 aaKnown RBP36.51■■■■□ 3.44
Tpm1-216ENSMUST00000113707 Zbtb7cQ8VCZ7 619 aa36.46■■■■□ 3.43
Tpm1-216ENSMUST00000113707 Cd109Q8R422 1442 aa36.45■■■■□ 3.43
Tpm1-216ENSMUST00000113707 Xrn1P97789 1719 aaKnown RBP36.44■■■■□ 3.42
Tpm1-216ENSMUST00000113707 Usp54Q8BL06 1588 aaKnown RBP36.44■■■■□ 3.42
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms