RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Nol10Q5RJG1 687 aaKnown RBP21.35■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Q3TQI7 289 aaKnown RBP21.35■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Rpap1Q80TE0 1409 aa21.34■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Gtf2e1Q9D0D5 440 aa21.33■■□□□ 1.01
Shroom3-201ENSMUST00000113051 U2af1Q9D883 239 aaKnown RBP21.31■■□□□ 1
Shroom3-201ENSMUST00000113051 Eif4g2Q62448 906 aaKnown RBP21.31■■□□□ 1
Shroom3-201ENSMUST00000113051 Mical1Q8VDP3 1048 aa21.31■■□□□ 1
Shroom3-201ENSMUST00000113051 Chrna2Q91X60 512 aa21.31■■□□□ 1
Shroom3-201ENSMUST00000113051 Kif27Q7M6Z4 1394 aa21.29■■□□□ 1
Shroom3-201ENSMUST00000113051 Cluap1Q8R3P7 413 aa21.29■■□□□ 1
Shroom3-201ENSMUST00000113051 Pak3Q61036 559 aa21.29■■□□□ 1
Shroom3-201ENSMUST00000113051 Chmp3Q9CQ10 224 aa21.29■■□□□ 1
Shroom3-201ENSMUST00000113051 Isy1Q69ZQ2 285 aaKnown RBP21.28■■□□□ 1
Shroom3-201ENSMUST00000113051 Sin3aQ60520 1274 aaKnown RBP21.27■■□□□ 1
Shroom3-201ENSMUST00000113051 Ciz1Q8VEH2 845 aa21.27■■□□□ 1
Shroom3-201ENSMUST00000113051 Trak1Q6PD31 939 aa21.27■■□□□ 1
Shroom3-201ENSMUST00000113051 SafbD3YXK2 937 aaKnown RBP21.27■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Dcaf11Q91VU6 549 aa21.26■□□□□ 0.99
Shroom3-201ENSMUST00000113051 MccE9PWI3 1003 aa21.26■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Pkd2O35245 966 aa21.26■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Chmp4bQ9D8B3 224 aaKnown RBP21.26■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Lemd3Q9WU40 921 aa21.24■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Htatsf1Q8BGC0 757 aa21.24■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Rwdd1Q9CQK7 243 aa21.23■□□□□ 0.99
Shroom3-201ENSMUST00000113051 CgnP59242 1191 aa21.22■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Fhad1A6PWD2 1420 aa21.21■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Kif3bQ61771 747 aa21.2■□□□□ 0.98
Shroom3-201ENSMUST00000113051 KnstrnQ9D9Z1 312 aaKnown RBP21.2■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Iffo2Q8R2V2 512 aa21.19■□□□□ 0.98
Shroom3-201ENSMUST00000113051 MecomP14404 1042 aa21.18■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Erich6bQ9D4S6 220 aa21.17■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Bcl11bQ99PV8 884 aa21.17■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Brpf1B2RRD7 1212 aa21.17■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Zfp777B9EKF4 885 aa21.16■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Ppm1gQ61074 542 aa21.16■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Tmf1B9EKI3 1091 aa21.16■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Sart3Q9JLI8 962 aaKnown RBP21.15■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Cabp1Q9JLK7 227 aa21.15■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Vps53Q8CCB4 832 aa21.15■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Baz1aO88379 1555 aa21.14■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Exoc6Q8R313 802 aa21.14■□□□□ 0.97
Shroom3-201ENSMUST00000113051 HnrnpuQ8VEK3 800 aaKnown RBP21.14■□□□□ 0.97
Shroom3-201ENSMUST00000113051 CrebrfQ8CDG5 640 aaKnown RBP21.13■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Aebp1Q640N1 1128 aa21.12■□□□□ 0.97
Shroom3-201ENSMUST00000113051 CrbnQ8C7D2 445 aa21.12■□□□□ 0.97
Shroom3-201ENSMUST00000113051 HdgfP51859 237 aaKnown RBP21.12■□□□□ 0.97
Shroom3-201ENSMUST00000113051 GorabQ8BRM2 368 aa21.11■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Mia2Q91ZV0 1396 aa21.11■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Golga2Q921M4 999 aa21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Mfap1aC0HKD8 439 aaKnown RBP21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Mfap1bC0HKD9 439 aaKnown RBP21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Tomm22Q9CPQ3 142 aa21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Spag9Q58A65 1321 aaKnown RBP21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Fan1Q69ZT1 1020 aa21.08■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Pip4k2bQ80XI4 416 aa21.06■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Tcerg1Q8CGF7 1100 aaKnown RBP21.05■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Ap3b2Q9JME5 1082 aa21.05■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Slc4a10Q5DTL9 1118 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Supt16hQ920B9 1047 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Rock2P70336 1388 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Mphosph9A6H5Y1 991 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 1700123L14RikQ3V2K7 440 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Ksr2Q3UVC0 959 aa21.03■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Prm3Q62100 101 aa21.02■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Utp14aQ640M1 767 aaKnown RBP21.02■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Cabp4Q8VHC5 271 aa21.01■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Noc3lQ8VI84 807 aaKnown RBP20.99■□□□□ 0.95
Shroom3-201ENSMUST00000113051 AppP12023 770 aa20.98■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Ccdc27Q3V036 639 aa20.98■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Chmp5Q9D7S9 219 aa20.98■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Dnttip2Q8R2M2 758 aaKnown RBP20.97■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Slc4a1apE9PX68 744 aa20.97■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Cc2d1aQ8K1A6 943 aa20.97■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Nup155Q99P88 1391 aaKnown RBP20.96■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Dnai2A2AC93 623 aa20.94■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Baz1bQ9Z277 1479 aa20.94■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Tpm3-rs7D3Z2H9 248 aa20.93■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Ccdc146E9Q9F7 977 aa20.93■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Srcin1Q9QWI6 1250 aa20.93■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Mak16Q8BGS0 296 aaKnown RBP20.92■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Ncbp3Q8BZR9 615 aaKnown RBP20.92■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Shq1Q7TMX5 569 aa20.9■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Kdm5dQ62240 1548 aa20.89■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Zscan21Q07231 555 aa20.89■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Adam1bQ8R534 806 aa20.89■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Mink1Q9JM52 1308 aa20.88■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Gpatch11Q3UFS4 262 aa20.87■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Sart1Q9Z315 806 aaKnown RBP20.86■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Tsen2Q6P7W5 460 aa20.86■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Dhx16G3X8X0 1044 aaKnown RBP20.86■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Mbd3Q9Z2D8 285 aaKnown RBP20.86■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Ccdc9Q8VC31 543 aaKnown RBP20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Gm973E9Q295 1059 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 EspnQ9ET47 871 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Tpd52l1O54818 204 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 CenpjQ569L8 1344 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 BccipQ9CWI3 316 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Stk31Q99MW1 1018 aa20.82■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Arid4aF8VPQ2 1261 aaKnown RBP20.82■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Eif2s2Q99L45 331 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms