RNA–Protein interactions for RNA: ENSMUST00000113051.8

Shroom3-201, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-201ENSMUST00000113051 Nol10Q5RJG1 687 aaKnown RBP21.35■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Q3TQI7 289 aaKnown RBP21.35■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Rpap1Q80TE0 1409 aa21.34■■□□□ 1.01
Shroom3-201ENSMUST00000113051 Gtf2e1Q9D0D5 440 aa21.33■■□□□ 1.01
Shroom3-201ENSMUST00000113051 U2af1Q9D883 239 aaKnown RBP21.31■■□□□ 1
Shroom3-201ENSMUST00000113051 Eif4g2Q62448 906 aaKnown RBP21.31■■□□□ 1
Shroom3-201ENSMUST00000113051 Mical1Q8VDP3 1048 aa21.31■■□□□ 1
Shroom3-201ENSMUST00000113051 Chrna2Q91X60 512 aa21.31■■□□□ 1
Shroom3-201ENSMUST00000113051 Kif27Q7M6Z4 1394 aa21.29■■□□□ 1
Shroom3-201ENSMUST00000113051 Cluap1Q8R3P7 413 aa21.29■■□□□ 1
Shroom3-201ENSMUST00000113051 Pak3Q61036 559 aa21.29■■□□□ 1
Shroom3-201ENSMUST00000113051 Chmp3Q9CQ10 224 aa21.29■■□□□ 1
Shroom3-201ENSMUST00000113051 Isy1Q69ZQ2 285 aaKnown RBP21.28■■□□□ 1
Shroom3-201ENSMUST00000113051 Sin3aQ60520 1274 aaKnown RBP21.27■■□□□ 1
Shroom3-201ENSMUST00000113051 Ciz1Q8VEH2 845 aa21.27■■□□□ 1
Shroom3-201ENSMUST00000113051 Trak1Q6PD31 939 aa21.27■■□□□ 1
Shroom3-201ENSMUST00000113051 SafbD3YXK2 937 aaKnown RBP21.27■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Dcaf11Q91VU6 549 aa21.26■□□□□ 0.99
Shroom3-201ENSMUST00000113051 MccE9PWI3 1003 aa21.26■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Pkd2O35245 966 aa21.26■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Chmp4bQ9D8B3 224 aaKnown RBP21.26■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Lemd3Q9WU40 921 aa21.24■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Htatsf1Q8BGC0 757 aa21.24■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Rwdd1Q9CQK7 243 aa21.23■□□□□ 0.99
Shroom3-201ENSMUST00000113051 CgnP59242 1191 aa21.22■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Fhad1A6PWD2 1420 aa21.21■□□□□ 0.99
Shroom3-201ENSMUST00000113051 Kif3bQ61771 747 aa21.2■□□□□ 0.98
Shroom3-201ENSMUST00000113051 KnstrnQ9D9Z1 312 aaKnown RBP21.2■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Iffo2Q8R2V2 512 aa21.19■□□□□ 0.98
Shroom3-201ENSMUST00000113051 MecomP14404 1042 aa21.18■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Erich6bQ9D4S6 220 aa21.17■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Bcl11bQ99PV8 884 aa21.17■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Brpf1B2RRD7 1212 aa21.17■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Zfp777B9EKF4 885 aa21.16■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Ppm1gQ61074 542 aa21.16■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Tmf1B9EKI3 1091 aa21.16■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Sart3Q9JLI8 962 aaKnown RBP21.15■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Cabp1Q9JLK7 227 aa21.15■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Vps53Q8CCB4 832 aa21.15■□□□□ 0.98
Shroom3-201ENSMUST00000113051 Baz1aO88379 1555 aa21.14■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Exoc6Q8R313 802 aa21.14■□□□□ 0.97
Shroom3-201ENSMUST00000113051 HnrnpuQ8VEK3 800 aaKnown RBP21.14■□□□□ 0.97
Shroom3-201ENSMUST00000113051 CrebrfQ8CDG5 640 aaKnown RBP21.13■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Aebp1Q640N1 1128 aa21.12■□□□□ 0.97
Shroom3-201ENSMUST00000113051 CrbnQ8C7D2 445 aa21.12■□□□□ 0.97
Shroom3-201ENSMUST00000113051 HdgfP51859 237 aaKnown RBP21.12■□□□□ 0.97
Shroom3-201ENSMUST00000113051 GorabQ8BRM2 368 aa21.11■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Mia2Q91ZV0 1396 aa21.11■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Golga2Q921M4 999 aa21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Mfap1aC0HKD8 439 aaKnown RBP21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Mfap1bC0HKD9 439 aaKnown RBP21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Tomm22Q9CPQ3 142 aa21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Spag9Q58A65 1321 aaKnown RBP21.09■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Fan1Q69ZT1 1020 aa21.08■□□□□ 0.97
Shroom3-201ENSMUST00000113051 Pip4k2bQ80XI4 416 aa21.06■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Tcerg1Q8CGF7 1100 aaKnown RBP21.05■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Ap3b2Q9JME5 1082 aa21.05■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Slc4a10Q5DTL9 1118 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Supt16hQ920B9 1047 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Rock2P70336 1388 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Mphosph9A6H5Y1 991 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 1700123L14RikQ3V2K7 440 aa21.04■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Ksr2Q3UVC0 959 aa21.03■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Prm3Q62100 101 aa21.02■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Utp14aQ640M1 767 aaKnown RBP21.02■□□□□ 0.96
Shroom3-201ENSMUST00000113051 Cabp4Q8VHC5 271 aa21.01■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Noc3lQ8VI84 807 aaKnown RBP20.99■□□□□ 0.95
Shroom3-201ENSMUST00000113051 AppP12023 770 aa20.98■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Ccdc27Q3V036 639 aa20.98■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Chmp5Q9D7S9 219 aa20.98■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Dnttip2Q8R2M2 758 aaKnown RBP20.97■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Slc4a1apE9PX68 744 aa20.97■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Cc2d1aQ8K1A6 943 aa20.97■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Nup155Q99P88 1391 aaKnown RBP20.96■□□□□ 0.95
Shroom3-201ENSMUST00000113051 Dnai2A2AC93 623 aa20.94■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Baz1bQ9Z277 1479 aa20.94■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Tpm3-rs7D3Z2H9 248 aa20.93■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Ccdc146E9Q9F7 977 aa20.93■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Srcin1Q9QWI6 1250 aa20.93■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Mak16Q8BGS0 296 aaKnown RBP20.92■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Ncbp3Q8BZR9 615 aaKnown RBP20.92■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Shq1Q7TMX5 569 aa20.9■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Kdm5dQ62240 1548 aa20.89■□□□□ 0.94
Shroom3-201ENSMUST00000113051 Zscan21Q07231 555 aa20.89■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Adam1bQ8R534 806 aa20.89■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Mink1Q9JM52 1308 aa20.88■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Gpatch11Q3UFS4 262 aa20.87■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Sart1Q9Z315 806 aaKnown RBP20.86■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Tsen2Q6P7W5 460 aa20.86■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Dhx16G3X8X0 1044 aaKnown RBP20.86■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Mbd3Q9Z2D8 285 aaKnown RBP20.86■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Ccdc9Q8VC31 543 aaKnown RBP20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Gm973E9Q295 1059 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 EspnQ9ET47 871 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Tpd52l1O54818 204 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 CenpjQ569L8 1344 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 BccipQ9CWI3 316 aa20.85■□□□□ 0.93
Shroom3-201ENSMUST00000113051 Stk31Q99MW1 1018 aa20.82■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Arid4aF8VPQ2 1261 aaKnown RBP20.82■□□□□ 0.92
Shroom3-201ENSMUST00000113051 Eif2s2Q99L45 331 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms