RNA–Protein interactions for RNA: ENSMUST00000112354.2

Scn9a-203, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 6,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-203ENSMUST00000112354 Trak1Q6PD31 939 aa8.59□□□□□ -1.03
Scn9a-203ENSMUST00000112354 Trim30dE9PWL0 497 aa8.58□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Gm6268A2A3U9 297 aa8.58□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Hspa5P20029 655 aaKnown RBP8.58□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Iqgap2Q3UQ44 1575 aa8.58□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Htatsf1Q8BGC0 757 aa8.58□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Efcab5A0JP43 1406 aa8.58□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Ppm1gQ61074 542 aa8.58□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Pabpn1Q8CCS6 302 aaKnown RBP8.57□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Ifit1bl1D3Z6F0 470 aa8.57□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Rtf1A2AQ19 715 aaKnown RBP8.57□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Psme1P97371 249 aa8.57□□□□□ -1.04
Scn9a-203ENSMUST00000112354 NgefQ8CHT1 710 aa8.56□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Kif3bQ61771 747 aa8.56□□□□□ -1.04
Scn9a-203ENSMUST00000112354 KnstrnQ9D9Z1 312 aaKnown RBP8.56□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Aebp2Q9Z248 504 aaKnown RBP8.56□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Rwdd1Q9CQK7 243 aa8.56□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Polr1aO35134 1717 aaKnown RBP8.56□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Sart1Q9Z315 806 aaKnown RBP8.55□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Rapgef2Q8CHG7 1496 aa8.55□□□□□ -1.04
Scn9a-203ENSMUST00000112354 CanxP35564 591 aaKnown RBP8.55□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Sart3Q9JLI8 962 aaKnown RBP8.55□□□□□ -1.04
Scn9a-203ENSMUST00000112354 CenpjQ569L8 1344 aa8.55□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Ccnb3Q810T2 1396 aa8.55□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Srcin1Q9QWI6 1250 aa8.54□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Txndc2Q6P902 515 aa8.54□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Zscan21Q07231 555 aa8.54□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Neurod2Q62414 383 aa8.54□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Irx6Q9ER75 438 aa8.53□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Soga1E1U8D0 1418 aa8.53□□□□□ -1.04
Scn9a-203ENSMUST00000112354 DekQ7TNV0 380 aaKnown RBP8.53□□□□□ -1.04
Scn9a-203ENSMUST00000112354 Jph4Q80WT0 628 aa8.52□□□□□ -1.04
Scn9a-203ENSMUST00000112354 PtmsQ9D0J8 101 aaKnown RBP8.52□□□□□ -1.04
Scn9a-203ENSMUST00000112354 MccE9PWI3 1003 aa8.52□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Cux1P53564 1515 aa8.52□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Mak16Q8BGS0 296 aaKnown RBP8.51□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Spag9Q58A65 1321 aaKnown RBP8.51□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Nsd2Q8BVE8 1365 aa8.5□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Trim44Q9QXA7 346 aa8.5□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Cnga1P29974 684 aa8.5□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Rab11fip3Q8CHD8 1047 aa8.5□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Ccdc27Q3V036 639 aa8.5□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Pes1Q9EQ61 584 aaKnown RBP8.49□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Prdm16A2A935 1275 aa8.49□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Stk26Q99JT2 416 aa8.49□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Shroom4Q1W617 1475 aa8.49□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Irx3P81067 507 aa8.48□□□□□ -1.05
Scn9a-203ENSMUST00000112354 PnnO35691 725 aaKnown RBP8.48□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Golga2Q921M4 999 aa8.48□□□□□ -1.05
Scn9a-203ENSMUST00000112354 U2af1Q9D883 239 aaKnown RBP8.48□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Top2aQ01320 1528 aaKnown RBP8.47□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Dnai2A2AC93 623 aa8.47□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Hsp90b1P08113 802 aaKnown RBP8.47□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Ap3b2Q9JME5 1082 aa8.47□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Speer4f1Q9D5Q6 258 aa8.47□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Cc2d2bA0A286YDU8 1405 aa8.46□□□□□ -1.05
Scn9a-203ENSMUST00000112354 1700019A02RikA0A087WPV9 146 aa8.46□□□□□ -1.05
Scn9a-203ENSMUST00000112354 Nol10Q5RJG1 687 aaKnown RBP8.46□□□□□ -1.05
Scn9a-203ENSMUST00000112354 NrkQ9R0G8 1455 aa8.46□□□□□ -1.05
Scn9a-203ENSMUST00000112354 AampJ3QN89 436 aa8.46□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Dcaf11Q91VU6 549 aa8.46□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Apbb1Q9QXJ1 710 aa8.46□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Wwc2Q6NXJ0 1187 aa8.46□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Ggt6Q6PDE7 497 aa8.45□□□□□ -1.06
Scn9a-203ENSMUST00000112354 MlecQ6ZQI3 291 aaKnown RBP8.45□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Utp14aQ640M1 767 aaKnown RBP8.45□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Vsig10D3YX43 558 aa8.45□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Q3TQI7 289 aaKnown RBP8.45□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Ankrd36D3Z4K0 1415 aa8.44□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Tcerg1Q8CGF7 1100 aaKnown RBP8.44□□□□□ -1.06
Scn9a-203ENSMUST00000112354 PtmaP26350 111 aa8.44□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Ccar1Q8CH18 1146 aaKnown RBP8.44□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Ciz1Q8VEH2 845 aa8.43□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Birc3O08863 600 aa8.43□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Exoc6Q8R313 802 aa8.43□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Map3k1P53349 1493 aa8.43□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Casc1Q6TDU8 730 aa8.43□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Fgd6Q69ZL1 1399 aa8.43□□□□□ -1.06
Scn9a-203ENSMUST00000112354 ErbinQ80TH2 1402 aa8.42□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Usp47Q8BY87 1376 aa8.42□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Plcb2A3KGF7 1181 aa8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Adam1bQ8R534 806 aa8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Mrc2Q64449 1479 aa8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Top2bQ64511 1612 aa8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Gm38655A0A286YDK6 273 aa8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 U2surpQ6NV83 1029 aaKnown RBP8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Urb2E9Q7L1 1524 aaKnown RBP8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Fan1Q69ZT1 1020 aa8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Rtn4Q99P72 1162 aaKnown RBP8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Fam71e1A1L3C1 212 aa8.41□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Cgnl1Q6AW69 1298 aa8.4□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Tdrd9Q14BI7 1383 aa8.4□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Ift140E9PY46 1464 aa8.4□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Slc4a1apE9PX68 744 aa8.4□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Chmp5Q9D7S9 219 aa8.4□□□□□ -1.06
Scn9a-203ENSMUST00000112354 EspnQ9ET47 871 aa8.4□□□□□ -1.06
Scn9a-203ENSMUST00000112354 Gm973E9Q295 1059 aa8.4□□□□□ -1.07
Scn9a-203ENSMUST00000112354 Stk31Q99MW1 1018 aa8.4□□□□□ -1.07
Scn9a-203ENSMUST00000112354 Sh3bp5Q9Z131 463 aa8.4□□□□□ -1.07
Scn9a-203ENSMUST00000112354 Duox2A2AQ99 1517 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 251.4 ms