RNA–Protein interactions for RNA: ENSMUST00000109546.8

Vcan-203, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 12,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-203ENSMUST00000109546 Gm6268A2A3U9 297 aa7.59□□□□□ -1.2
Vcan-203ENSMUST00000109546 Cwc22Q8C5N3 908 aaKnown RBP7.59□□□□□ -1.2
Vcan-203ENSMUST00000109546 Rsph3aQ3UFY4 516 aa7.58□□□□□ -1.2
Vcan-203ENSMUST00000109546 EspnQ9ET47 871 aa7.58□□□□□ -1.2
Vcan-203ENSMUST00000109546 Ccdc173A0JLY1 547 aa7.58□□□□□ -1.2
Vcan-203ENSMUST00000109546 Polr3gQ6NXY9 223 aa7.58□□□□□ -1.2
Vcan-203ENSMUST00000109546 Mterf4Q8BVN4 346 aa7.58□□□□□ -1.2
Vcan-203ENSMUST00000109546 Cep164Q5DU05 1446 aa7.58□□□□□ -1.2
Vcan-203ENSMUST00000109546 Hmgn5Q9JL35 406 aa7.57□□□□□ -1.2
Vcan-203ENSMUST00000109546 EzrP26040 586 aaKnown RBP7.57□□□□□ -1.2
Vcan-203ENSMUST00000109546 Mapk8ip2Q9ERE9 830 aa7.57□□□□□ -1.2
Vcan-203ENSMUST00000109546 Chmp4cQ9D7F7 232 aa7.57□□□□□ -1.2
Vcan-203ENSMUST00000109546 Map3k7clP58500 142 aa7.57□□□□□ -1.2
Vcan-203ENSMUST00000109546 Zbtb7cQ8VCZ7 619 aa7.57□□□□□ -1.2
Vcan-203ENSMUST00000109546 Plagl1Q9JLQ4 704 aa7.57□□□□□ -1.2
Vcan-203ENSMUST00000109546 NaspQ99MD9 773 aaKnown RBP7.56□□□□□ -1.2
Vcan-203ENSMUST00000109546 ItpripQ3TNL8 555 aa7.56□□□□□ -1.2
Vcan-203ENSMUST00000109546 Gcom1E9PZ54 550 aa7.56□□□□□ -1.2
Vcan-203ENSMUST00000109546 MyzapQ3UIJ9 466 aa7.56□□□□□ -1.2
Vcan-203ENSMUST00000109546 Ccer1Q9CQL2 403 aa7.56□□□□□ -1.2
Vcan-203ENSMUST00000109546 Arglu1Q3UL36 271 aaKnown RBP7.56□□□□□ -1.2
Vcan-203ENSMUST00000109546 Zcchc6Q5BLK4 1491 aaKnown RBP7.56□□□□□ -1.2
Vcan-203ENSMUST00000109546 Sh3bp5Q9Z131 463 aa7.56□□□□□ -1.2
Vcan-203ENSMUST00000109546 Fam193aQ8CGI1 1231 aaKnown RBP7.55□□□□□ -1.2
Vcan-203ENSMUST00000109546 OptnQ8K3K8 584 aa7.55□□□□□ -1.2
Vcan-203ENSMUST00000109546 Hook1Q8BIL5 728 aa7.55□□□□□ -1.2
Vcan-203ENSMUST00000109546 Trap1aP19473 224 aa7.55□□□□□ -1.2
Vcan-203ENSMUST00000109546 Spata24Q6P926 205 aa7.55□□□□□ -1.2
Vcan-203ENSMUST00000109546 BbxQ8VBW5 907 aa7.55□□□□□ -1.2
Vcan-203ENSMUST00000109546 Mre11Q61216 706 aa7.55□□□□□ -1.2
Vcan-203ENSMUST00000109546 Slc4a1apE9PX68 744 aa7.54□□□□□ -1.2
Vcan-203ENSMUST00000109546 Paip2Q9D6V8 124 aa7.54□□□□□ -1.2
Vcan-203ENSMUST00000109546 Iffo2Q8R2V2 512 aa7.54□□□□□ -1.2
Vcan-203ENSMUST00000109546 Sart3Q9JLI8 962 aaKnown RBP7.54□□□□□ -1.2
Vcan-203ENSMUST00000109546 Rwdd1Q9CQK7 243 aa7.53□□□□□ -1.2
Vcan-203ENSMUST00000109546 Mns1Q61884 491 aa7.53□□□□□ -1.2
Vcan-203ENSMUST00000109546 Ipo8Q7TMY7 1010 aa7.53□□□□□ -1.2
Vcan-203ENSMUST00000109546 Chmp5Q9D7S9 219 aa7.53□□□□□ -1.2
Vcan-203ENSMUST00000109546 Pnmal2G3X9N3 661 aa7.53□□□□□ -1.2
Vcan-203ENSMUST00000109546 Smc2Q8CG48 1191 aaKnown RBP7.53□□□□□ -1.2
Vcan-203ENSMUST00000109546 Clip1Q922J3 1391 aa7.52□□□□□ -1.2
Vcan-203ENSMUST00000109546 Ccdc47Q9D024 483 aaKnown RBP7.52□□□□□ -1.21
Vcan-203ENSMUST00000109546 Znf526Q8BI66 675 aa7.52□□□□□ -1.21
Vcan-203ENSMUST00000109546 Gtf3c5Q8R2T8 520 aa7.52□□□□□ -1.21
Vcan-203ENSMUST00000109546 Sept6Q9R1T4 434 aa7.52□□□□□ -1.21
Vcan-203ENSMUST00000109546 Spryd3E9Q9B3 442 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 St18Q80TY4 1045 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 Isy1Q69ZQ2 285 aaKnown RBP7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 Pmfbp1Q9WVQ0 1022 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 Tpd52l1O54818 204 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 Paf1Q8K2T8 535 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 AampJ3QN89 436 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 Fez1Q8K0X8 392 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 Plekhg3Q4VAC9 1341 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 Rabep1O35551 862 aa7.51□□□□□ -1.21
Vcan-203ENSMUST00000109546 Usp35M0QWN7 1009 aa7.5□□□□□ -1.21
Vcan-203ENSMUST00000109546 Hoxa7P02830 229 aa7.5□□□□□ -1.21
Vcan-203ENSMUST00000109546 HmmrQ00547 794 aaKnown RBP7.5□□□□□ -1.21
Vcan-203ENSMUST00000109546 Srek1Q8BZX4 494 aaKnown RBP7.5□□□□□ -1.21
Vcan-203ENSMUST00000109546 Prm3Q62100 101 aa7.5□□□□□ -1.21
Vcan-203ENSMUST00000109546 Gpatch11Q3UFS4 262 aa7.5□□□□□ -1.21
Vcan-203ENSMUST00000109546 Ccdc83Q9D4V3 305 aa7.5□□□□□ -1.21
Vcan-203ENSMUST00000109546 Rsph6aQ8CDR2 708 aa7.49□□□□□ -1.21
Vcan-203ENSMUST00000109546 Sf3a1Q8K4Z5 791 aaKnown RBP7.49□□□□□ -1.21
Vcan-203ENSMUST00000109546 Rnf20Q5DTM8 973 aa7.49□□□□□ -1.21
Vcan-203ENSMUST00000109546 Dydc1Q9D9T0 175 aa7.49□□□□□ -1.21
Vcan-203ENSMUST00000109546 Kif7B7ZNG0 1348 aa7.49□□□□□ -1.21
Vcan-203ENSMUST00000109546 Rassf8Q8CJ96 419 aa7.49□□□□□ -1.21
Vcan-203ENSMUST00000109546 Odf2A3KGV1 830 aaKnown RBP7.48□□□□□ -1.21
Vcan-203ENSMUST00000109546 Evc2Q8K1G2 1220 aa7.48□□□□□ -1.21
Vcan-203ENSMUST00000109546 Mex3cQ05A36 652 aaKnown RBP7.48□□□□□ -1.21
Vcan-203ENSMUST00000109546 Cdkn1cP49919 348 aa7.48□□□□□ -1.21
Vcan-203ENSMUST00000109546 Necab1Q8BG18 352 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 TxlnbQ8VBT1 685 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Erlin2Q8BFZ9 340 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Prdm10Q3UTQ7 1184 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Zbtb4Q5F293 982 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Ddx46Q569Z5 1032 aaKnown RBP7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Gtf2a1Q99PM3 378 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Cgnl1Q6AW69 1298 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Sparcl1P70663 650 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Gbp4Q61107 620 aa7.47□□□□□ -1.21
Vcan-203ENSMUST00000109546 Ylpm1Q9R0I7 1386 aaKnown RBP7.46□□□□□ -1.21
Vcan-203ENSMUST00000109546 Sept11Q8C1B7 431 aaKnown RBP7.46□□□□□ -1.21
Vcan-203ENSMUST00000109546 4921530L21RikQ9CQ47 274 aa7.46□□□□□ -1.21
Vcan-203ENSMUST00000109546 SlkO54988 1233 aa7.46□□□□□ -1.21
Vcan-203ENSMUST00000109546 Ppfibp2O35711 882 aa7.46□□□□□ -1.22
Vcan-203ENSMUST00000109546 CgnP59242 1191 aa7.46□□□□□ -1.22
Vcan-203ENSMUST00000109546 Cep112Q5PR68 954 aa7.46□□□□□ -1.22
Vcan-203ENSMUST00000109546 Gripap1Q8VD04 806 aa7.46□□□□□ -1.22
Vcan-203ENSMUST00000109546 Rtn4Q99P72 1162 aaKnown RBP7.46□□□□□ -1.22
Vcan-203ENSMUST00000109546 Eea1Q8BL66 1411 aa7.46□□□□□ -1.22
Vcan-203ENSMUST00000109546 IqubQ8CDK3 788 aa7.46□□□□□ -1.22
Vcan-203ENSMUST00000109546 Supt16hQ920B9 1047 aa7.46□□□□□ -1.22
Vcan-203ENSMUST00000109546 Rtf1A2AQ19 715 aaKnown RBP7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Fhad1A6PWD2 1420 aa7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Filip1lQ6P6L0 1131 aa7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Eid3Q3V124 375 aa7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Kif4P33174 1231 aa7.45□□□□□ -1.22
Vcan-203ENSMUST00000109546 Gabpb2P81069 414 aa7.45□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms