RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Cep162Q6ZQ06 1403 aa11.9□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Zscan21Q07231 555 aa11.9□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Pcmtd1P59913 357 aa11.9□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Znf316Q6PGE4 1016 aa11.9□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Clstn1Q9EPL2 979 aa11.9□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Nolc1E9Q5C9 702 aaKnown RBP11.9□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Fhad1A6PWD2 1420 aa11.9□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Tnnt2P50752 301 aa11.89□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 MccE9PWI3 1003 aa11.89□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Mak16Q8BGS0 296 aaKnown RBP11.88□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Map4P27546 1125 aaKnown RBP11.88□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Ipo8Q7TMY7 1010 aa11.88□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Ifit1bl1D3Z6F0 470 aa11.87□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Tmf1B9EKI3 1091 aa11.87□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Cluap1Q8R3P7 413 aa11.87□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Mphosph9A6H5Y1 991 aa11.86□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 ChgaP26339 463 aaKnown RBP11.86□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 U2surpQ6NV83 1029 aaKnown RBP11.86□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Plin1Q8CGN5 517 aa11.86□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Mfap1aC0HKD8 439 aaKnown RBP11.85□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Mfap1bC0HKD9 439 aaKnown RBP11.85□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Sh3bp5Q9Z131 463 aa11.85□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 HnrnpuQ8VEK3 800 aaKnown RBP11.85□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Tmco5bQ80X59 307 aa11.85□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Kif27Q7M6Z4 1394 aa11.84□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Trak1Q6PD31 939 aa11.84□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Znf330Q922H9 316 aa11.84□□□□□ -0.51
Prpf40a-201ENSMUST00000076313 Arid3cA6PWV5 409 aa11.83□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 CrbnQ8C7D2 445 aa11.83□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Golga2Q921M4 999 aa11.83□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Baz1bQ9Z277 1479 aa11.83□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Aebp1Q640N1 1128 aa11.82□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 MsnP26041 577 aaKnown RBP11.82□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Arhgap35Q91YM2 1499 aa11.82□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Gtf2e1Q9D0D5 440 aa11.82□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 U2af1Q9D883 239 aaKnown RBP11.82□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Taok2Q6ZQ29 1240 aa11.82□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Cabp1Q9JLK7 227 aa11.82□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Fyco1Q8VDC1 1437 aa11.81□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Dcaf11Q91VU6 549 aa11.81□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Stk26Q99JT2 416 aa11.8□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 GorabQ8BRM2 368 aa11.8□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 PtmsQ9D0J8 101 aaKnown RBP11.8□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Senp3Q9EP97 568 aaKnown RBP11.79□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Rassf8Q8CJ96 419 aa11.79□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Fmn1Q05860 1466 aa11.79□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Rtf1A2AQ19 715 aaKnown RBP11.78□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Rrp12Q6P5B0 1295 aaKnown RBP11.78□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Ppp1r18Q8BQ30 594 aa11.78□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Zfp777B9EKF4 885 aa11.78□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 Gtf3c3Q3TMP1 882 aa11.77□□□□□ -0.52
Prpf40a-201ENSMUST00000076313 CgnP59242 1191 aa11.77□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 SlkO54988 1233 aa11.77□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Gm973E9Q295 1059 aa11.76□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 AknaQ80VW7 1404 aa11.76□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 CntlnA2AM05 1397 aa11.76□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Sart3Q9JLI8 962 aaKnown RBP11.76□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Rock2P70336 1388 aa11.76□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Rpap1Q80TE0 1409 aa11.75□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Ksr2Q3UVC0 959 aa11.75□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Smg6P61406 1418 aaKnown RBP11.75□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Anapc15P60007 132 aa11.75□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Birc3O08863 600 aa11.73□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Iffo2Q8R2V2 512 aa11.73□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Gpatch11Q3UFS4 262 aa11.72□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Tnnt1O88346 262 aa11.72□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Calcoco2A2A6M5 331 aa11.72□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Q3TQI7 289 aaKnown RBP11.71□□□□□ -0.53
Prpf40a-201ENSMUST00000076313 Kiaa0754Q69ZZ9 979 aa11.71□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Srcin1Q9QWI6 1250 aa11.7□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Slc4a1apE9PX68 744 aa11.7□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 MecomP14404 1042 aa11.7□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Ccar1Q8CH18 1146 aaKnown RBP11.7□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 RdxP26043 583 aaKnown RBP11.69□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 CrebrfQ8CDG5 640 aaKnown RBP11.69□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Nup155Q99P88 1391 aaKnown RBP11.68□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Pds5bQ4VA53 1446 aaKnown RBP11.68□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Ddrgk1Q80WW9 315 aa11.68□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Rapgef2Q8CHG7 1496 aa11.67□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Pibf1E9Q6K3 756 aa11.67□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Cald1E9QA15 768 aaKnown RBP11.67□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Pde3bQ61409 1100 aa11.67□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Pank3Q8R2W9 370 aa11.66□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Smarce1O54941 411 aaKnown RBP11.66□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 VgfQ0VGU4 617 aa11.66□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Becn1O88597 448 aa11.66□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Brpf1B2RRD7 1212 aa11.66□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Rsph3aQ3UFY4 516 aa11.65□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Ylpm1Q9R0I7 1386 aaKnown RBP11.65□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Usp47Q8BY87 1376 aa11.65□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 R3hcc1Q8BSI6 488 aa11.65□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Plekhh2Q8C115 1491 aa11.65□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Ccdc146E9Q9F7 977 aa11.65□□□□□ -0.54
Prpf40a-201ENSMUST00000076313 Sox12Q04890 314 aa11.65□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Mre11Q61216 706 aa11.65□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 4933402E13RikQ9D4D2 429 aa11.65□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Trim30aP15533 496 aa11.64□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Spag9Q58A65 1321 aaKnown RBP11.63□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Cecr2E9Q2Z1 1453 aa11.63□□□□□ -0.55
Prpf40a-201ENSMUST00000076313 Cux2P70298 1426 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms