RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 AdgbG3UZ78 1657 aa38.59■■■■□ 3.77
Cpsf4-201ENSMUST00000070487 Kiaa1551Q5DTW7 1521 aa38.59■■■■□ 3.77
Cpsf4-201ENSMUST00000070487 Tiam1Q60610 1591 aa38.57■■■■□ 3.76
Cpsf4-201ENSMUST00000070487 AglF8VPN4 1532 aa38.51■■■■□ 3.75
Cpsf4-201ENSMUST00000070487 Cdc42bpaQ3UU96 1719 aa38.5■■■■□ 3.75
Cpsf4-201ENSMUST00000070487 A2mQ6GQT1 1474 aa38.48■■■■□ 3.75
Cpsf4-201ENSMUST00000070487 Fam208aQ69ZR9 1610 aaKnown RBP38.46■■■■□ 3.75
Cpsf4-201ENSMUST00000070487 Plekhg3Q4VAC9 1341 aa38.39■■■■□ 3.74
Cpsf4-201ENSMUST00000070487 NexmifQ5DTT1 1515 aa38.39■■■■□ 3.74
Cpsf4-201ENSMUST00000070487 Mlh3A0A1Y7VMP7 1443 aa38.34■■■■□ 3.73
Cpsf4-201ENSMUST00000070487 Fndc1E9Q043 1732 aa38.31■■■■□ 3.72
Cpsf4-201ENSMUST00000070487 Rnf17Q99MV7 1640 aa38.25■■■■□ 3.71
Cpsf4-201ENSMUST00000070487 Lmtk2Q3TYD6 1471 aa38.23■■■■□ 3.71
Cpsf4-201ENSMUST00000070487 Arhgap5P97393 1501 aa38.21■■■■□ 3.71
Cpsf4-201ENSMUST00000070487 Ccnb3Q810T2 1396 aa38.19■■■■□ 3.7
Cpsf4-201ENSMUST00000070487 Abca9Q8K449 1623 aa38.16■■■■□ 3.7
Cpsf4-201ENSMUST00000070487 Caskin1Q6P9K8 1431 aa38.1■■■■□ 3.69
Cpsf4-201ENSMUST00000070487 Tdrd9Q14BI7 1383 aa38.07■■■■□ 3.69
Cpsf4-201ENSMUST00000070487 Adcy10Q8C0T9 1614 aa38.05■■■■□ 3.68
Cpsf4-201ENSMUST00000070487 Lemd3Q9WU40 921 aa38.03■■■■□ 3.68
Cpsf4-201ENSMUST00000070487 Cdk11bP24788 784 aaKnown RBP38.02■■■■□ 3.68
Cpsf4-201ENSMUST00000070487 Cfap74Q3UY96 1578 aa37.99■■■■□ 3.67
Cpsf4-201ENSMUST00000070487 Synj2Q9D2G5 1434 aa37.97■■■■□ 3.67
Cpsf4-201ENSMUST00000070487 Arhgef40Q3UPH7 1517 aa37.97■■■■□ 3.67
Cpsf4-201ENSMUST00000070487 Trappc8E9PWG2 1437 aa37.97■■■■□ 3.67
Cpsf4-201ENSMUST00000070487 Kiaa0556Q8C753 1610 aa37.97■■■■□ 3.67
Cpsf4-201ENSMUST00000070487 Ncapd3Q6ZQK0 1506 aa37.96■■■■□ 3.67
Cpsf4-201ENSMUST00000070487 Pdcd11Q6NS46 1862 aaKnown RBP37.95■■■■□ 3.67
Cpsf4-201ENSMUST00000070487 Abcc3B2RX12 1523 aa37.94■■■■□ 3.66
Cpsf4-201ENSMUST00000070487 Gm32742A0A1B0GT42 1604 aa37.93■■■■□ 3.66
Cpsf4-201ENSMUST00000070487 Kidins220E9Q9B7 1793 aa37.92■■■■□ 3.66
Cpsf4-201ENSMUST00000070487 OvosQ3UU35 1456 aa37.91■■■■□ 3.66
Cpsf4-201ENSMUST00000070487 Dnajc5gQ8C632 165 aa37.89■■■■□ 3.66
Cpsf4-201ENSMUST00000070487 Plppr3Q7TPB0 716 aa37.88■■■■□ 3.65
Cpsf4-201ENSMUST00000070487 Hecw2Q6I6G8 1578 aa37.86■■■■□ 3.65
Cpsf4-201ENSMUST00000070487 Sart1Q9Z315 806 aaKnown RBP37.83■■■■□ 3.65
Cpsf4-201ENSMUST00000070487 Kdm6bQ5NCY0 1641 aa37.75■■■■□ 3.63
Cpsf4-201ENSMUST00000070487 Kdm5cP41230 1554 aa37.74■■■■□ 3.63
Cpsf4-201ENSMUST00000070487 Alpk3Q924C5 1678 aa37.72■■■■□ 3.63
Cpsf4-201ENSMUST00000070487 Ptch1Q61115 1434 aa37.69■■■■□ 3.62
Cpsf4-201ENSMUST00000070487 Atp10aO54827 1508 aa37.68■■■■□ 3.62
Cpsf4-201ENSMUST00000070487 3425401B19RikD3Z1D3 1412 aa37.66■■■■□ 3.62
Cpsf4-201ENSMUST00000070487 Abcc5Q9R1X5 1436 aa37.64■■■■□ 3.62
Cpsf4-201ENSMUST00000070487 Mtus2Q3UHD3 1353 aa37.62■■■■□ 3.61
Cpsf4-201ENSMUST00000070487 Naip2Q9QUK4 1447 aa37.61■■■■□ 3.61
Cpsf4-201ENSMUST00000070487 Cdc42bpbQ7TT50 1713 aa37.6■■■■□ 3.61
Cpsf4-201ENSMUST00000070487 Dip2cE9PWR4 1557 aa37.6■■■■□ 3.61
Cpsf4-201ENSMUST00000070487 Yeats2Q3TUF7 1407 aa37.59■■■■□ 3.61
Cpsf4-201ENSMUST00000070487 Plekhh2Q8C115 1491 aa37.59■■■■□ 3.61
Cpsf4-201ENSMUST00000070487 Hecw1Q8K4P8 1604 aa37.58■■■■□ 3.61
Cpsf4-201ENSMUST00000070487 RereQ80TZ9 1558 aa37.57■■■■□ 3.6
Cpsf4-201ENSMUST00000070487 Kif14L0N7N1 1674 aaKnown RBP37.57■■■■□ 3.6
Cpsf4-201ENSMUST00000070487 UbtfP25976 765 aaKnown RBP37.54■■■■□ 3.6
Cpsf4-201ENSMUST00000070487 NpatQ8BMA5 1420 aa37.51■■■■□ 3.6
Cpsf4-201ENSMUST00000070487 Qser1A2BIE1 1698 aa37.51■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Prdm16A2A935 1275 aa37.5■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Cul9Q80TT8 1865 aa37.49■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Zmym4A2A791 1549 aaKnown RBP37.48■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Cabp1Q9JLK7 227 aa37.47■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Map3k5O35099 1380 aa37.47■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Il16O54824 1322 aa37.46■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Rrp7aQ9D1C9 280 aaKnown RBP37.46■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Neurl4Q5NCX5 1563 aa37.46■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 MlecQ6ZQI3 291 aaKnown RBP37.45■■■■□ 3.59
Cpsf4-201ENSMUST00000070487 Mast1Q9R1L5 1570 aa37.44■■■■□ 3.58
Cpsf4-201ENSMUST00000070487 Nos1Q9Z0J4 1429 aa37.42■■■■□ 3.58
Cpsf4-201ENSMUST00000070487 SphkapQ6NSW3 1687 aa37.39■■■■□ 3.58
Cpsf4-201ENSMUST00000070487 Chic2Q9D9G3 165 aa37.38■■■■□ 3.57
Cpsf4-201ENSMUST00000070487 Adamtsl3G3UXC7 1706 aa37.34■■■■□ 3.57
Cpsf4-201ENSMUST00000070487 Fmn2Q9JL04 1578 aa37.34■■■■□ 3.57
Cpsf4-201ENSMUST00000070487 Cdc42bpgQ80UW5 1551 aa37.32■■■■□ 3.57
Cpsf4-201ENSMUST00000070487 Fhod3Q76LL6 1578 aa37.32■■■■□ 3.56
Cpsf4-201ENSMUST00000070487 Adgrl2Q8JZZ7 1487 aa37.3■■■■□ 3.56
Cpsf4-201ENSMUST00000070487 Fam50aQ9WV03 339 aaKnown RBP37.25■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 Cfap65Q3V0B4 1847 aa37.24■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 Znf518aB2RRF6 1478 aaKnown RBP37.24■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 Dennd4bQ3U1Y4 1499 aa37.24■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 UacaQ8CGB3 1411 aa37.24■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 Camsap2Q8C1B1 1461 aa37.23■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 Kdm3bQ6ZPY7 1562 aa37.23■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 Safb2Q80YR5 991 aaKnown RBP37.21■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 Adgrb2Q8CGM1 1561 aa37.2■■■■□ 3.55
Cpsf4-201ENSMUST00000070487 Gli2Q0VGT2 1544 aa37.19■■■■□ 3.54
Cpsf4-201ENSMUST00000070487 Naip6Q9JIB6 1403 aa37.19■■■■□ 3.54
Cpsf4-201ENSMUST00000070487 NclP09405 707 aaKnown RBP37.19■■■■□ 3.54
Cpsf4-201ENSMUST00000070487 Trpm1Q2TV84 1622 aa37.18■■■■□ 3.54
Cpsf4-201ENSMUST00000070487 Spag9Q58A65 1321 aaKnown RBP37.17■■■■□ 3.54
Cpsf4-201ENSMUST00000070487 Kif3bQ61771 747 aa37.17■■■■□ 3.54
Cpsf4-201ENSMUST00000070487 Ehmt2Q9Z148 1263 aaKnown RBP37.17■■■■□ 3.54
Cpsf4-201ENSMUST00000070487 Xrn1P97789 1719 aaKnown RBP37.16■■■■□ 3.54
Cpsf4-201ENSMUST00000070487 Rfx7F8VPJ6 1459 aa37.11■■■■□ 3.53
Cpsf4-201ENSMUST00000070487 Afap1Q80YS6 731 aa37.1■■■■□ 3.53
Cpsf4-201ENSMUST00000070487 Ssh2Q5SW75 1423 aa37.07■■■■□ 3.53
Cpsf4-201ENSMUST00000070487 Plch2A2AP18 1501 aa37.07■■■■□ 3.52
Cpsf4-201ENSMUST00000070487 Abca17E9PX95 1733 aa37.06■■■■□ 3.52
Cpsf4-201ENSMUST00000070487 Rsph4aQ8BYM7 716 aa37.06■■■■□ 3.52
Cpsf4-201ENSMUST00000070487 Mia2Q91ZV0 1396 aa37.02■■■■□ 3.52
Cpsf4-201ENSMUST00000070487 Uggt2E9Q4X2 1504 aa37.01■■■■□ 3.52
Cpsf4-201ENSMUST00000070487 Topbp1Q6ZQF0 1515 aa37.01■■■■□ 3.52
Cpsf4-201ENSMUST00000070487 Talpid3E9PV87 1520 aa36.99■■■■□ 3.51
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms