RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Rwdd1Q9CQK7 243 aa14.08□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 Trim30aP15533 496 aa14.08□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 KnstrnQ9D9Z1 312 aaKnown RBP14.06□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 MccE9PWI3 1003 aa14.05□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 Sin3aQ60520 1274 aaKnown RBP14.04□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 U2surpQ6NV83 1029 aaKnown RBP14.04□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 Ipo4Q8VI75 1082 aa14.04□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 EspnQ9ET47 871 aa14.04□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 Gm20521D3Z5F7 333 aa14.04□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 VgfQ0VGU4 617 aa14.03□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 RdxP26043 583 aaKnown RBP14.03□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 Gm973E9Q295 1059 aa14.03□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 Prm3Q62100 101 aa14.03□□□□□ -0.16
Gtf3c1-201ENSMUST00000055506 Speer4f1Q9D5Q6 258 aa14.02□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Mroh3A0A1D5RM54 893 aa14.01□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Ipo8Q7TMY7 1010 aa14.01□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Tmco5bQ80X59 307 aa14.01□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Srpk2O54781 681 aaKnown RBP14□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 IqubQ8CDK3 788 aa14□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Iffo2Q8R2V2 512 aa14□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Map7d2A2AG50 781 aa13.99□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Hspa5P20029 655 aaKnown RBP13.99□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Becn1O88597 448 aa13.98□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Exoc6Q8R313 802 aa13.98□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Drc7Q6V3W6 876 aa13.98□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Clstn2Q9ER65 966 aa13.97□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Ftsj3Q9DBE9 838 aaKnown RBP13.97□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Ddrgk1Q80WW9 315 aa13.96□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Stk24Q99KH8 431 aa13.96□□□□□ -0.17
Gtf3c1-201ENSMUST00000055506 Cald1E9QA15 768 aaKnown RBP13.96□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Ncbp3Q8BZR9 615 aaKnown RBP13.95□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Fam193aQ8CGI1 1231 aaKnown RBP13.95□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Tnnt1O88346 262 aa13.94□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Stag3O70576 1240 aa13.94□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Setd5Q5XJV7 1441 aa13.93□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 MyclP10166 368 aa13.93□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Isy1Q69ZQ2 285 aaKnown RBP13.91□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Chmp4cQ9D7F7 232 aa13.91□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 NudcO35685 332 aaKnown RBP13.91□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Ush1cQ9ES64 910 aa13.91□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Znf692Q3U381 531 aa13.9□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 Polr3gQ6NXY9 223 aa13.9□□□□□ -0.18
Gtf3c1-201ENSMUST00000055506 A0A0U1RNP2 1173 aa13.89□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 MecomP14404 1042 aa13.89□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 CrbnQ8C7D2 445 aa13.89□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Chmp4bQ9D8B3 224 aaKnown RBP13.89□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Cwc22Q8C5N3 908 aaKnown RBP13.89□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Mbd3Q9Z2D8 285 aaKnown RBP13.88□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Noc3lQ8VI84 807 aaKnown RBP13.87□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Znf771Q8BJ90 317 aa13.87□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Rfx1P48377 963 aa13.86□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Pibf1E9Q6K3 756 aa13.86□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Brpf1B2RRD7 1212 aa13.86□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Rsph6aQ8CDR2 708 aa13.85□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Tpm3-rs7D3Z2H9 248 aa13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Fam13bQ8K2H3 851 aa13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Tpm3P21107 285 aaKnown RBP13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Utp3Q9JI13 469 aaKnown RBP13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Pnmal2G3X9N3 661 aa13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Sf3a1Q8K4Z5 791 aaKnown RBP13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 PtmsQ9D0J8 101 aaKnown RBP13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 HnrnpuQ8VEK3 800 aaKnown RBP13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Rbm10Q99KG3 930 aaKnown RBP13.84□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Wdr78E9PYY5 807 aa13.83□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Rrp7aQ9D1C9 280 aaKnown RBP13.83□□□□□ -0.19
Gtf3c1-201ENSMUST00000055506 Iqcf3Q9D498 203 aa13.83□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Sart3Q9JLI8 962 aaKnown RBP13.83□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Ccer1Q9CQL2 403 aa13.82□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Rundc1Q0VDN7 615 aa13.81□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Ccdc146E9Q9F7 977 aa13.8□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 R3hcc1Q8BSI6 488 aa13.8□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 U2af1Q9D883 239 aaKnown RBP13.8□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Taf3Q5HZG4 932 aa13.79□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Eif2s2Q99L45 331 aaKnown RBP13.79□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Abcc8B2RUS7 1588 aa13.79□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 TimelessQ9R1X4 1197 aa13.79□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Slc4a1apE9PX68 744 aa13.78□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Fnbp4Q6ZQ03 1031 aa13.77□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Rtf1A2AQ19 715 aaKnown RBP13.77□□□□□ -0.2
Gtf3c1-201ENSMUST00000055506 Stk26Q99JT2 416 aa13.77□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Mex3cQ05A36 652 aaKnown RBP13.77□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Ksr2Q3UVC0 959 aa13.77□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Dixdc1Q80Y83 711 aa13.77□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Tpd52l1O54818 204 aa13.76□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Q8BT18 775 aa13.76□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Cspp1B2RX88 1205 aa13.76□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 BbxQ8VBW5 907 aa13.76□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Zscan21Q07231 555 aa13.75□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Rsph3aQ3UFY4 516 aa13.75□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Brd4Q9ESU6 1400 aaKnown RBP13.75□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Q3TQI7 289 aaKnown RBP13.75□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Golga2Q921M4 999 aa13.75□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Birc3O08863 600 aa13.74□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 FosbP13346 338 aa13.74□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 4933402E13RikQ9D4D2 429 aa13.74□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Vps53Q8CCB4 832 aa13.74□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Ppp1r18Q8BQ30 594 aa13.73□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Nol12Q8BG17 217 aa13.72□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Dcaf11Q91VU6 549 aa13.72□□□□□ -0.21
Gtf3c1-201ENSMUST00000055506 Chmp3Q9CQ10 224 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms