RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Tiam1Q60610 1591 aa28.9■■■□□ 2.22
Vti1b-201ENSMUST00000055262 AglF8VPN4 1532 aa28.89■■■□□ 2.22
Vti1b-201ENSMUST00000055262 Kiaa1551Q5DTW7 1521 aa28.89■■■□□ 2.21
Vti1b-201ENSMUST00000055262 Naip1Q9QWK5 1403 aa28.88■■■□□ 2.21
Vti1b-201ENSMUST00000055262 Cdc42bpaQ3UU96 1719 aa28.85■■■□□ 2.21
Vti1b-201ENSMUST00000055262 A2mQ6GQT1 1474 aa28.84■■■□□ 2.21
Vti1b-201ENSMUST00000055262 Fndc1E9Q043 1732 aa28.82■■■□□ 2.2
Vti1b-201ENSMUST00000055262 Fam208aQ69ZR9 1610 aaKnown RBP28.82■■■□□ 2.2
Vti1b-201ENSMUST00000055262 NexmifQ5DTT1 1515 aa28.8■■■□□ 2.2
Vti1b-201ENSMUST00000055262 Mlh3A0A1Y7VMP7 1443 aa28.75■■■□□ 2.19
Vti1b-201ENSMUST00000055262 Plekhg3Q4VAC9 1341 aa28.71■■■□□ 2.19
Vti1b-201ENSMUST00000055262 Arhgap5P97393 1501 aa28.68■■■□□ 2.18
Vti1b-201ENSMUST00000055262 Abca9Q8K449 1623 aa28.66■■■□□ 2.18
Vti1b-201ENSMUST00000055262 Rnf17Q99MV7 1640 aa28.66■■■□□ 2.18
Vti1b-201ENSMUST00000055262 Plppr3Q7TPB0 716 aa28.59■■■□□ 2.17
Vti1b-201ENSMUST00000055262 Lmtk2Q3TYD6 1471 aa28.58■■■□□ 2.17
Vti1b-201ENSMUST00000055262 Ccnb3Q810T2 1396 aa28.57■■■□□ 2.16
Vti1b-201ENSMUST00000055262 Dnajc5gQ8C632 165 aa28.54■■■□□ 2.16
Vti1b-201ENSMUST00000055262 Adcy10Q8C0T9 1614 aa28.52■■■□□ 2.16
Vti1b-201ENSMUST00000055262 Tdrd9Q14BI7 1383 aa28.51■■■□□ 2.15
Vti1b-201ENSMUST00000055262 Caskin1Q6P9K8 1431 aa28.48■■■□□ 2.15
Vti1b-201ENSMUST00000055262 Hecw2Q6I6G8 1578 aa28.47■■■□□ 2.15
Vti1b-201ENSMUST00000055262 Gm32742A0A1B0GT42 1604 aa28.47■■■□□ 2.15
Vti1b-201ENSMUST00000055262 Kiaa0556Q8C753 1610 aa28.47■■■□□ 2.15
Vti1b-201ENSMUST00000055262 Trappc8E9PWG2 1437 aa28.45■■■□□ 2.15
Vti1b-201ENSMUST00000055262 Synj2Q9D2G5 1434 aa28.45■■■□□ 2.15
Vti1b-201ENSMUST00000055262 Arhgef40Q3UPH7 1517 aa28.45■■■□□ 2.15
Vti1b-201ENSMUST00000055262 Cfap74Q3UY96 1578 aa28.45■■■□□ 2.14
Vti1b-201ENSMUST00000055262 Lemd3Q9WU40 921 aa28.44■■■□□ 2.14
Vti1b-201ENSMUST00000055262 Kidins220E9Q9B7 1793 aa28.44■■■□□ 2.14
Vti1b-201ENSMUST00000055262 OvosQ3UU35 1456 aa28.43■■■□□ 2.14
Vti1b-201ENSMUST00000055262 Alpk3Q924C5 1678 aa28.41■■■□□ 2.14
Vti1b-201ENSMUST00000055262 Abcc3B2RX12 1523 aa28.39■■■□□ 2.14
Vti1b-201ENSMUST00000055262 Ncapd3Q6ZQK0 1506 aa28.35■■■□□ 2.13
Vti1b-201ENSMUST00000055262 Cdk11bP24788 784 aaKnown RBP28.33■■■□□ 2.13
Vti1b-201ENSMUST00000055262 Kdm6bQ5NCY0 1641 aa28.32■■■□□ 2.12
Vti1b-201ENSMUST00000055262 Pdcd11Q6NS46 1862 aaKnown RBP28.31■■■□□ 2.12
Vti1b-201ENSMUST00000055262 Kdm5cP41230 1554 aa28.31■■■□□ 2.12
Vti1b-201ENSMUST00000055262 Ptch1Q61115 1434 aa28.3■■■□□ 2.12
Vti1b-201ENSMUST00000055262 Sart1Q9Z315 806 aaKnown RBP28.29■■■□□ 2.12
Vti1b-201ENSMUST00000055262 Dip2cE9PWR4 1557 aa28.26■■■□□ 2.12
Vti1b-201ENSMUST00000055262 Yeats2Q3TUF7 1407 aa28.25■■■□□ 2.11
Vti1b-201ENSMUST00000055262 Kif14L0N7N1 1674 aaKnown RBP28.25■■■□□ 2.11
Vti1b-201ENSMUST00000055262 Naip2Q9QUK4 1447 aa28.25■■■□□ 2.11
Vti1b-201ENSMUST00000055262 Qser1A2BIE1 1698 aa28.24■■■□□ 2.11
Vti1b-201ENSMUST00000055262 RereQ80TZ9 1558 aa28.23■■■□□ 2.11
Vti1b-201ENSMUST00000055262 Atp10aO54827 1508 aa28.21■■■□□ 2.11
Vti1b-201ENSMUST00000055262 Ehmt2Q9Z148 1263 aaKnown RBP28.21■■■□□ 2.11
Vti1b-201ENSMUST00000055262 UbtfP25976 765 aaKnown RBP28.21■■■□□ 2.11
Vti1b-201ENSMUST00000055262 MlecQ6ZQI3 291 aaKnown RBP28.2■■■□□ 2.1
Vti1b-201ENSMUST00000055262 Hecw1Q8K4P8 1604 aa28.19■■■□□ 2.1
Vti1b-201ENSMUST00000055262 Cdc42bpbQ7TT50 1713 aa28.18■■■□□ 2.1
Vti1b-201ENSMUST00000055262 3425401B19RikD3Z1D3 1412 aa28.18■■■□□ 2.1
Vti1b-201ENSMUST00000055262 Mtus2Q3UHD3 1353 aa28.15■■■□□ 2.1
Vti1b-201ENSMUST00000055262 NpatQ8BMA5 1420 aa28.14■■■□□ 2.1
Vti1b-201ENSMUST00000055262 Plekhh2Q8C115 1491 aa28.13■■■□□ 2.09
Vti1b-201ENSMUST00000055262 Abcc5Q9R1X5 1436 aa28.13■■■□□ 2.09
Vti1b-201ENSMUST00000055262 Zmym4A2A791 1549 aaKnown RBP28.11■■■□□ 2.09
Vti1b-201ENSMUST00000055262 Cul9Q80TT8 1865 aa28.1■■■□□ 2.09
Vti1b-201ENSMUST00000055262 Map3k5O35099 1380 aa28.1■■■□□ 2.09
Vti1b-201ENSMUST00000055262 Adamtsl3G3UXC7 1706 aa28.05■■■□□ 2.08
Vti1b-201ENSMUST00000055262 Mast1Q9R1L5 1570 aa28.02■■■□□ 2.08
Vti1b-201ENSMUST00000055262 Rrp7aQ9D1C9 280 aaKnown RBP28.02■■■□□ 2.08
Vti1b-201ENSMUST00000055262 Nos1Q9Z0J4 1429 aa28.01■■■□□ 2.07
Vti1b-201ENSMUST00000055262 SphkapQ6NSW3 1687 aa28.01■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Cdc42bpgQ80UW5 1551 aa28■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Fmn2Q9JL04 1578 aa27.98■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Cabp1Q9JLK7 227 aa27.98■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Fhod3Q76LL6 1578 aa27.97■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Chic2Q9D9G3 165 aa27.96■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Neurl4Q5NCX5 1563 aa27.96■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Camsap2Q8C1B1 1461 aa27.96■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Prdm16A2A935 1275 aa27.95■■■□□ 2.07
Vti1b-201ENSMUST00000055262 Xrn1P97789 1719 aaKnown RBP27.93■■■□□ 2.06
Vti1b-201ENSMUST00000055262 Cfap65Q3V0B4 1847 aa27.93■■■□□ 2.06
Vti1b-201ENSMUST00000055262 Safb2Q80YR5 991 aaKnown RBP27.93■■■□□ 2.06
Vti1b-201ENSMUST00000055262 Trpm1Q2TV84 1622 aa27.92■■■□□ 2.06
Vti1b-201ENSMUST00000055262 Il16O54824 1322 aa27.91■■■□□ 2.06
Vti1b-201ENSMUST00000055262 Gli2Q0VGT2 1544 aa27.91■■■□□ 2.06
Vti1b-201ENSMUST00000055262 Dennd4bQ3U1Y4 1499 aa27.91■■■□□ 2.06
Vti1b-201ENSMUST00000055262 Znf518aB2RRF6 1478 aaKnown RBP27.89■■■□□ 2.06
Vti1b-201ENSMUST00000055262 Adgrb2Q8CGM1 1561 aa27.87■■■□□ 2.05
Vti1b-201ENSMUST00000055262 Adgrl2Q8JZZ7 1487 aa27.87■■■□□ 2.05
Vti1b-201ENSMUST00000055262 UacaQ8CGB3 1411 aa27.87■■■□□ 2.05
Vti1b-201ENSMUST00000055262 Naip6Q9JIB6 1403 aa27.87■■■□□ 2.05
Vti1b-201ENSMUST00000055262 Kdm3bQ6ZPY7 1562 aa27.86■■■□□ 2.05
Vti1b-201ENSMUST00000055262 Fam50aQ9WV03 339 aaKnown RBP27.85■■■□□ 2.05
Vti1b-201ENSMUST00000055262 Kif3bQ61771 747 aa27.81■■■□□ 2.04
Vti1b-201ENSMUST00000055262 Brwd3A2AHJ4 1799 aa27.8■■■□□ 2.04
Vti1b-201ENSMUST00000055262 Rfx7F8VPJ6 1459 aa27.8■■■□□ 2.04
Vti1b-201ENSMUST00000055262 MyclP10166 368 aa27.79■■■□□ 2.04
Vti1b-201ENSMUST00000055262 Afap1Q80YS6 731 aa27.79■■■□□ 2.04
Vti1b-201ENSMUST00000055262 Spag9Q58A65 1321 aaKnown RBP27.78■■■□□ 2.04
Vti1b-201ENSMUST00000055262 Mia2Q91ZV0 1396 aa27.78■■■□□ 2.04
Vti1b-201ENSMUST00000055262 Plch2A2AP18 1501 aa27.77■■■□□ 2.04
Vti1b-201ENSMUST00000055262 Ssh2Q5SW75 1423 aa27.77■■■□□ 2.04
Vti1b-201ENSMUST00000055262 Abca17E9PX95 1733 aa27.76■■■□□ 2.03
Vti1b-201ENSMUST00000055262 Topbp1Q6ZQF0 1515 aa27.74■■■□□ 2.03
Vti1b-201ENSMUST00000055262 Supt6hQ62383 1726 aaKnown RBP27.74■■■□□ 2.03
Vti1b-201ENSMUST00000055262 Zbtb7cQ8VCZ7 619 aa27.74■■■□□ 2.03
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms