RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

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Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 AI481877A2ALV5 1481 aa10.03□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Afap1Q80YS6 731 aa10.03□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Arhgef5E9Q7D5 1581 aa10.03□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Slx4Q6P1D7 1565 aa10.03□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Arhgap5P97393 1501 aa10.03□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Dnajc5gQ8C632 165 aa10.03□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Mug1P28665 1476 aa10.03□□□□□ -0.8
Bdnf-201ENSMUST00000053317 A2mQ6GQT1 1474 aa10.03□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Ankrd26Q811D2 1581 aa10.02□□□□□ -0.8
Bdnf-201ENSMUST00000053317 Pip4k2bQ80XI4 416 aa10.02□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Eif4g1Q6NZJ6 1600 aaKnown RBP10.01□□□□□ -0.81
Bdnf-201ENSMUST00000053317 BC005561E9Q5E2 1589 aa10.01□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Stk24Q99KH8 431 aa10.01□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Wdr7Q920I9 1489 aa10.01□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Dnmt1P13864 1620 aaKnown RBP9.99□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Pcgf6Q99NA9 353 aa9.99□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Pcf11G3X9Z4 1553 aa9.99□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Depdc5P61460 1591 aa9.99□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Slc24a1Q91WD8 1130 aa9.98□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Map3k4O08648 1597 aa9.98□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Prex2Q3LAC4 1598 aa9.98□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Arid4bA2CG63 1314 aaKnown RBP9.98□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Map4P27546 1125 aaKnown RBP9.97□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Fancd2Q80V62 1450 aa9.97□□□□□ -0.81
Bdnf-201ENSMUST00000053317 Acin1Q9JIX8 1338 aaKnown RBP9.95□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Clstn2Q9ER65 966 aa9.95□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Trappc8E9PWG2 1437 aa9.95□□□□□ -0.82
Bdnf-201ENSMUST00000053317 NexmifQ5DTT1 1515 aa9.94□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Zfp644E9QA22 1323 aa9.94□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Trak1Q6PD31 939 aa9.94□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Spag9Q58A65 1321 aaKnown RBP9.94□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Mlh3A0A1Y7VMP7 1443 aa9.93□□□□□ -0.82
Bdnf-201ENSMUST00000053317 DiexfQ8BTT6 772 aaKnown RBP9.93□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Rapgef6Q5NCJ1 1609 aa9.93□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Ecm2Q5FW85 670 aa9.93□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Abca5Q8K448 1642 aa9.92□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Plekhh2Q8C115 1491 aa9.92□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Chd1P40201 1711 aa9.91□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Zcchc11B2RX14 1644 aaKnown RBP9.91□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Ak9G3UYQ4 1894 aa9.91□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Txndc2Q6P902 515 aa9.9□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Kdm2aP59997 1161 aa9.9□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Myt1Q8CFC2 1127 aa9.9□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Lrrc9Q8CDN9 1456 aa9.9□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Kdm5bQ80Y84 1544 aa9.9□□□□□ -0.82
Bdnf-201ENSMUST00000053317 Rgl3Q3UYI5 709 aa9.9□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Gm1043A0A140LJC2 1431 aa9.89□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Prdm10Q3UTQ7 1184 aa9.87□□□□□ -0.83
Bdnf-201ENSMUST00000053317 OvosQ3UU35 1456 aa9.87□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Grwd1Q810D6 446 aaKnown RBP9.87□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Tiam1Q60610 1591 aa9.87□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Ptch1Q61115 1434 aa9.86□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Mroh3A0A1D5RM54 893 aa9.86□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Pde4cQ3UEI1 686 aa9.85□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Ppargc1bQ8VHJ7 1014 aa9.85□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Nup155Q99P88 1391 aaKnown RBP9.85□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Rrbp1Q99PL5 1605 aaKnown RBP9.84□□□□□ -0.83
Bdnf-201ENSMUST00000053317 Psme1P97371 249 aa9.83□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Mapkbp1Q6NS57 1503 aa9.83□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Fndc1E9Q043 1732 aa9.83□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Prdm16A2A935 1275 aa9.82□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Abcc5Q9R1X5 1436 aa9.81□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Mroh2aD3Z750 1679 aa9.81□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Mphosph9A6H5Y1 991 aa9.81□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Pkd2O35245 966 aa9.81□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Arhgef11Q68FM7 1552 aa9.8□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Stk26Q99JT2 416 aa9.8□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Zfyve16Q80U44 1528 aa9.8□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Bcl11bQ99PV8 884 aa9.8□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Arhgef40Q3UPH7 1517 aa9.8□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Yeats2Q3TUF7 1407 aa9.79□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Pprc1Q6NZN1 1644 aa9.79□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Hspa5P20029 655 aaKnown RBP9.78□□□□□ -0.84
Bdnf-201ENSMUST00000053317 NgefQ8CHT1 710 aa9.78□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Setbp1Q9Z180 1582 aa9.77□□□□□ -0.84
Bdnf-201ENSMUST00000053317 Mia2Q91ZV0 1396 aa9.77□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Ccer2J3QPU5 274 aa9.76□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Lmo7E9PYF4 1699 aaKnown RBP9.76□□□□□ -0.85
Bdnf-201ENSMUST00000053317 3425401B19RikD3Z1D3 1412 aa9.75□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Rsph4aQ8BYM7 716 aa9.75□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Ttll5Q8CHB8 1328 aa9.74□□□□□ -0.85
Bdnf-201ENSMUST00000053317 NpatQ8BMA5 1420 aa9.74□□□□□ -0.85
Bdnf-201ENSMUST00000053317 TonslQ6NZL6 1363 aa9.74□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Gm20521D3Z5F7 333 aa9.73□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Erich3F6QRE9 1637 aa9.73□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Srpk2O54781 681 aaKnown RBP9.73□□□□□ -0.85
Bdnf-201ENSMUST00000053317 NefmP08553 848 aa9.73□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Adcy10Q8C0T9 1614 aa9.73□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Ifit1bl1D3Z6F0 470 aa9.73□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Caskin1Q6P9K8 1431 aa9.73□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Clasp1Q80TV8 1535 aaKnown RBP9.72□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Cfap65Q3V0B4 1847 aa9.72□□□□□ -0.85
Bdnf-201ENSMUST00000053317 UacaQ8CGB3 1411 aa9.72□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Sall3Q62255 1320 aa9.72□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Mapk8ip2Q9ERE9 830 aa9.72□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Synj2Q9D2G5 1434 aa9.72□□□□□ -0.85
Bdnf-201ENSMUST00000053317 NhsB1AV60 1647 aa9.71□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Supt5hO55201 1082 aaKnown RBP9.71□□□□□ -0.85
Bdnf-201ENSMUST00000053317 Shq1Q7TMX5 569 aa9.7□□□□□ -0.86
Bdnf-201ENSMUST00000053317 Q9D9H8 365 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms