RNA–Protein interactions for RNA: ENSMUST00000047479.2

Pcdhac2-201, Transcript of Protocadherin alpha C2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac2, Length 5,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2-201ENSMUST00000047479 HnrnpuQ8VEK3 800 aaKnown RBP22.45■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 MccE9PWI3 1003 aa22.44■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Q8BT18 775 aa22.44■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Txndc2Q6P902 515 aa22.43■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Fam71e1A1L3C1 212 aa22.42■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Sox12Q04890 314 aa22.42■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Trak1Q6PD31 939 aa22.42■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Speer4f1Q9D5Q6 258 aa22.42■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Tmf1B9EKI3 1091 aa22.41■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Rassf8Q8CJ96 419 aa22.41■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Birc3O08863 600 aa22.4■■□□□ 1.18
Pcdhac2-201ENSMUST00000047479 Mbd3Q9Z2D8 285 aaKnown RBP22.39■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 U2af1Q9D883 239 aaKnown RBP22.38■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Sart3Q9JLI8 962 aaKnown RBP22.38■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Tnnt1O88346 262 aa22.36■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 HdgfP51859 237 aaKnown RBP22.36■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Nol10Q5RJG1 687 aaKnown RBP22.36■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Cabp1Q9JLK7 227 aa22.36■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Q3TQI7 289 aaKnown RBP22.36■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Anapc15P60007 132 aa22.34■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Znf316Q6PGE4 1016 aa22.34■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Tmco5bQ80X59 307 aa22.33■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Spryd3E9Q9B3 442 aa22.33■■□□□ 1.17
Pcdhac2-201ENSMUST00000047479 Dcaf11Q91VU6 549 aa22.31■■□□□ 1.16
Pcdhac2-201ENSMUST00000047479 Mphosph9A6H5Y1 991 aa22.31■■□□□ 1.16
Pcdhac2-201ENSMUST00000047479 Kif3bQ61771 747 aa22.3■■□□□ 1.16
Pcdhac2-201ENSMUST00000047479 Fyco1Q8VDC1 1437 aa22.3■■□□□ 1.16
Pcdhac2-201ENSMUST00000047479 Ccdc27Q3V036 639 aa22.3■■□□□ 1.16
Pcdhac2-201ENSMUST00000047479 Cep162Q6ZQ06 1403 aa22.29■■□□□ 1.16
Pcdhac2-201ENSMUST00000047479 Fmn1Q05860 1466 aa22.29■■□□□ 1.16
Pcdhac2-201ENSMUST00000047479 Slc4a3P16283 1227 aa22.28■■□□□ 1.16
Pcdhac2-201ENSMUST00000047479 Exoc6Q8R313 802 aa22.26■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Golga2Q921M4 999 aa22.26■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Sin3aQ60520 1274 aaKnown RBP22.25■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Spag9Q58A65 1321 aaKnown RBP22.24■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Pde3bQ61409 1100 aa22.24■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Baz1bQ9Z277 1479 aa22.24■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Zscan21Q07231 555 aa22.24■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Rock2P70336 1388 aa22.23■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 1700123L14RikQ3V2K7 440 aa22.22■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Dhx57Q6P5D3 1388 aaKnown RBP22.21■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Nup155Q99P88 1391 aaKnown RBP22.21■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Chmp5Q9D7S9 219 aa22.21■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Ccdc88bQ4QRL3 1481 aa22.21■■□□□ 1.15
Pcdhac2-201ENSMUST00000047479 Znf330Q922H9 316 aa22.2■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Adam1bQ8R534 806 aa22.2■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Senp3Q9EP97 568 aaKnown RBP22.19■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Srcin1Q9QWI6 1250 aa22.19■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Arhgap35Q91YM2 1499 aa22.19■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Cux2P70298 1426 aa22.19■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 MecomP14404 1042 aa22.18■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Rsph4aQ8BYM7 716 aa22.18■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Iffo2Q8R2V2 512 aa22.18■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 CntlnA2AM05 1397 aa22.18■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Pcmtd1P59913 357 aa22.18■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Mak16Q8BGS0 296 aaKnown RBP22.18■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Cluap1Q8R3P7 413 aa22.16■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Dnai2A2AC93 623 aa22.16■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Supt16hQ920B9 1047 aa22.15■■□□□ 1.14
Pcdhac2-201ENSMUST00000047479 Chmp3Q9CQ10 224 aa22.14■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Gm973E9Q295 1059 aa22.13■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 SafbD3YXK2 937 aaKnown RBP22.13■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Pibf1E9Q6K3 756 aa22.13■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Tcerg1Q8CGF7 1100 aaKnown RBP22.13■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 PtmsQ9D0J8 101 aaKnown RBP22.11■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Ap3b2Q9JME5 1082 aa22.11■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 EspnQ9ET47 871 aa22.11■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Fan1Q69ZT1 1020 aa22.1■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Utp14aQ640M1 767 aaKnown RBP22.1■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 CenpjQ569L8 1344 aa22.09■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Plekhh2Q8C115 1491 aa22.09■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Sart1Q9Z315 806 aaKnown RBP22.09■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Pak3Q61036 559 aa22.09■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 CgnP59242 1191 aa22.08■■□□□ 1.13
Pcdhac2-201ENSMUST00000047479 Ksr2Q3UVC0 959 aa22.07■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Slc4a1apE9PX68 744 aa22.07■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Erich6bQ9D4S6 220 aa22.07■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 CrbnQ8C7D2 445 aa22.06■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Brpf1B2RRD7 1212 aa22.06■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Ccar1Q8CH18 1146 aaKnown RBP22.03■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Mfap1aC0HKD8 439 aaKnown RBP22.03■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Mfap1bC0HKD9 439 aaKnown RBP22.03■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Stard8Q8K031 1019 aa22.03■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Tpm3-rs7D3Z2H9 248 aa22.03■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 Dnai1Q8C0M8 701 aa22.03■■□□□ 1.12
Pcdhac2-201ENSMUST00000047479 R3hcc1Q8BSI6 488 aa21.99■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Phldb1Q6PDH0 1371 aaKnown RBP21.99■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Ubap1lG3UW59 384 aa21.99■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Ppm1fQ8CGA0 452 aa21.98■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Cabp4Q8VHC5 271 aa21.98■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Carmil1Q6EDY6 1374 aa21.98■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 GorabQ8BRM2 368 aa21.98■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Stk31Q99MW1 1018 aa21.96■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Tsen2Q6P7W5 460 aa21.96■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Dnttip2Q8R2M2 758 aaKnown RBP21.96■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 Ipo8Q7TMY7 1010 aa21.95■■□□□ 1.11
Pcdhac2-201ENSMUST00000047479 CrebrfQ8CDG5 640 aaKnown RBP21.95■■□□□ 1.1
Pcdhac2-201ENSMUST00000047479 Ccnb3Q810T2 1396 aa21.94■■□□□ 1.1
Pcdhac2-201ENSMUST00000047479 Smarce1O54941 411 aaKnown RBP21.94■■□□□ 1.1
Pcdhac2-201ENSMUST00000047479 Slc4a10Q5DTL9 1118 aa21.92■■□□□ 1.1
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms