RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Trpm2Q91YD4 1506 aa13.41□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Ccdc141E9Q8Q6 1531 aa13.4□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 Magi1Q6RHR9 1471 aa13.4□□□□□ -0.26
Ctnna1-201ENSMUST00000042345 AlkP97793 1621 aa13.38□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Lmod2Q3UHZ5 550 aa13.37□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Neurl4Q5NCX5 1563 aa13.37□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Il16O54824 1322 aa13.37□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Prex2Q3LAC4 1598 aa13.36□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Arhgap31A6X8Z5 1425 aa13.36□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Rnf17Q99MV7 1640 aa13.36□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Mlh3A0A1Y7VMP7 1443 aa13.36□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Gm32742A0A1B0GT42 1604 aa13.35□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Fam163aQ8CAA5 168 aa13.35□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Caskin1Q6P9K8 1431 aa13.35□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Chd1P40201 1711 aa13.35□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Mast1Q9R1L5 1570 aa13.34□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 NhsB1AV60 1647 aa13.34□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Dhx57Q6P5D3 1388 aaKnown RBP13.34□□□□□ -0.27
Ctnna1-201ENSMUST00000042345 Fmn2Q9JL04 1578 aa13.33□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Plekhh2Q8C115 1491 aa13.32□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Wdr7Q920I9 1489 aa13.32□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Adgrb2Q8CGM1 1561 aa13.32□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Supt6hQ62383 1726 aaKnown RBP13.31□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Fancd2Q80V62 1450 aa13.3□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Hecw1Q8K4P8 1604 aa13.3□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Rprd2Q6NXI6 1469 aaKnown RBP13.29□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Neo1P97798 1493 aa13.29□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Neurod1Q60867 357 aa13.29□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Eid3Q3V124 375 aa13.28□□□□□ -0.28
Ctnna1-201ENSMUST00000042345 Pik3c2gO70167 1506 aa13.27□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Mbd5B1AYB6 1498 aa13.27□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Abca8bQ8K440 1620 aa13.26□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Adgrl2Q8JZZ7 1487 aa13.25□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Arhgap27A2AB59 869 aa13.25□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Fgd6Q69ZL1 1399 aa13.24□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Kif14L0N7N1 1674 aaKnown RBP13.24□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Fam50aQ9WV03 339 aaKnown RBP13.24□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Abcc3B2RX12 1523 aa13.24□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Cfap74Q3UY96 1578 aa13.23□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 DroshaQ5HZJ0 1373 aaKnown RBP13.23□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Hspa5P20029 655 aaKnown RBP13.21□□□□□ -0.29
Ctnna1-201ENSMUST00000042345 Gm13697A2AK42 830 aa13.2□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Abca17E9PX95 1733 aa13.19□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Cdc42bpbQ7TT50 1713 aa13.19□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Mphosph9A6H5Y1 991 aa13.19□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Cabp1Q9JLK7 227 aa13.19□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Lrrc9Q8CDN9 1456 aa13.19□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Iqgap1Q9JKF1 1657 aaKnown RBP13.18□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Robo2Q7TPD3 1470 aa13.18□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Jph4Q80WT0 628 aa13.18□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Abcc1O35379 1528 aa13.18□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Asxl1P59598 1514 aa13.17□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Wdr66E9Q743 1299 aa13.17□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Anks4bQ8K3X6 423 aa13.17□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Mtus2Q3UHD3 1353 aa13.16□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Kidins220E9Q9B7 1793 aa13.16□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 Gm14025A2AP89 1413 aa13.15□□□□□ -0.3
Ctnna1-201ENSMUST00000042345 PtprgQ05909 1442 aa13.14□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Dot1lQ6XZL8 1540 aa13.14□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Chic2Q9D9G3 165 aa13.13□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Tdrd9Q14BI7 1383 aa13.13□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Zfp644E9QA22 1323 aa13.12□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Ncoa1P70365 1447 aa13.12□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Ppargc1bQ8VHJ7 1014 aa13.1□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Usp47Q8BY87 1376 aa13.1□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Xrn1P97789 1719 aaKnown RBP13.09□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Tubgcp6G5E8P0 1769 aa13.08□□□□□ -0.31
Ctnna1-201ENSMUST00000042345 Ssh2Q5SW75 1423 aa13.08□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Abca9Q8K449 1623 aa13.07□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Cdk11bP24788 784 aaKnown RBP13.07□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Nop58Q6DFW4 536 aaKnown RBP13.07□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Tmem131lQ3U3D7 1597 aa13.06□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 ShprhQ7TPQ3 1674 aa13.06□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Cpsf1Q9EPU4 1441 aaKnown RBP13.06□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Mug2P28666 1451 aa13.05□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Ppip5k1A2ARP1 1436 aa13.05□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Trappc8E9PWG2 1437 aa13.05□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Arhgap5P97393 1501 aa13.05□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Ttll5Q8CHB8 1328 aa13.05□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Zfyve16Q80U44 1528 aa13.04□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Pkd2O35245 966 aa13.04□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Naip6Q9JIB6 1403 aa13.04□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Setd1aE9PYH6 1716 aa13.04□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 AknaQ80VW7 1404 aa13.03□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Rock1P70335 1354 aa13.03□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Cep170Q6A065 1588 aa13.03□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Gapvd1Q6PAR5 1458 aa13.02□□□□□ -0.32
Ctnna1-201ENSMUST00000042345 Myo5cE9Q1F5 1742 aa13.02□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 NclP09405 707 aaKnown RBP13.01□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Dhx9O70133 1380 aaKnown RBP13.01□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Fndc1E9Q043 1732 aa13.01□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Atp10dQ8K2X1 1416 aa13□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 RalgapbQ8BQZ4 1484 aa13□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Znf608Q56A10 1511 aa12.99□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Prdm2A2A7B5 1709 aaKnown RBP12.99□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Adamts13Q769J6 1426 aa12.98□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Tarbp1E9Q368 1579 aa12.98□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Igf1rQ60751 1373 aa12.98□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Usp54Q8BL06 1588 aaKnown RBP12.98□□□□□ -0.33
Ctnna1-201ENSMUST00000042345 Smg6P61406 1418 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms