RNA–Protein interactions for RNA: ENSMUST00000040135.8

Nup43-201, Transcript of Nucleoporin Nup43, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup43, Length 1,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43-201ENSMUST00000040135 Skiv2lQ6NZR5 1244 aa14.48□□□□□ -0.09
Nup43-201ENSMUST00000040135 Pelp1Q9DBD5 1123 aaKnown RBP14.47□□□□□ -0.09
Nup43-201ENSMUST00000040135 Inpp5dQ9ES52 1191 aa14.46□□□□□ -0.09
Nup43-201ENSMUST00000040135 Hoxa2P31245 372 aa14.44□□□□□ -0.1
Nup43-201ENSMUST00000040135 ZyxQ62523 564 aa14.44□□□□□ -0.1
Nup43-201ENSMUST00000040135 Lce6aD3YV94 81 aa14.43□□□□□ -0.1
Nup43-201ENSMUST00000040135 Mkrn3Q60764 544 aa14.43□□□□□ -0.1
Nup43-201ENSMUST00000040135 Pdia6Q922R8 440 aaKnown RBP14.43□□□□□ -0.1
Nup43-201ENSMUST00000040135 Fam135aQ6NS59 1506 aa14.39□□□□□ -0.11
Nup43-201ENSMUST00000040135 ElnP54320 860 aa14.37□□□□□ -0.11
Nup43-201ENSMUST00000040135 Eya1P97767 591 aa14.37□□□□□ -0.11
Nup43-201ENSMUST00000040135 Gpr37l1Q99JG2 481 aa14.35□□□□□ -0.11
Nup43-201ENSMUST00000040135 Ercc6F8VPZ5 1481 aa14.35□□□□□ -0.11
Nup43-201ENSMUST00000040135 Atad2bE9Q166 1460 aaKnown RBP14.33□□□□□ -0.12
Nup43-201ENSMUST00000040135 Ddx11Q6AXC6 880 aa14.33□□□□□ -0.12
Nup43-201ENSMUST00000040135 Ffar3Q3UFD7 319 aa14.31□□□□□ -0.12
Nup43-201ENSMUST00000040135 Cnksr2Q80YA9 1032 aa14.31□□□□□ -0.12
Nup43-201ENSMUST00000040135 Crim1Q9JLL0 1037 aa14.31□□□□□ -0.12
Nup43-201ENSMUST00000040135 ChgaP26339 463 aaKnown RBP14.29□□□□□ -0.12
Nup43-201ENSMUST00000040135 Gm13695A2AK44 830 aa14.27□□□□□ -0.13
Nup43-201ENSMUST00000040135 LipiF6YQT7 476 aa14.27□□□□□ -0.13
Nup43-201ENSMUST00000040135 Sall2Q9QX96 1004 aa14.27□□□□□ -0.13
Nup43-201ENSMUST00000040135 Pcdh10E9PXQ7 1057 aa14.25□□□□□ -0.13
Nup43-201ENSMUST00000040135 Slc12a5Q91V14 1138 aa14.25□□□□□ -0.13
Nup43-201ENSMUST00000040135 JmyQ9QXM1 983 aa14.25□□□□□ -0.13
Nup43-201ENSMUST00000040135 Lhx6Q9R1R0 363 aa14.25□□□□□ -0.13
Nup43-201ENSMUST00000040135 Smpd1Q04519 627 aa14.24□□□□□ -0.13
Nup43-201ENSMUST00000040135 Thap8E9Q695 213 aa14.23□□□□□ -0.13
Nup43-201ENSMUST00000040135 Fmr1nbQ80ZA7 238 aa14.23□□□□□ -0.13
Nup43-201ENSMUST00000040135 Masp1P98064 704 aa14.22□□□□□ -0.13
Nup43-201ENSMUST00000040135 Pdcd7Q9WTY1 482 aa14.22□□□□□ -0.13
Nup43-201ENSMUST00000040135 RragcQ99K70 398 aa14.18□□□□□ -0.14
Nup43-201ENSMUST00000040135 Prrt3Q6PE13 971 aa14.16□□□□□ -0.14
Nup43-201ENSMUST00000040135 Pbx2O35984 430 aa14.15□□□□□ -0.14
Nup43-201ENSMUST00000040135 Lrfn2Q80TG9 788 aa14.15□□□□□ -0.14
Nup43-201ENSMUST00000040135 Setdb2Q8C267 713 aa14.15□□□□□ -0.14
Nup43-201ENSMUST00000040135 Ric3Q8BPM6 367 aa14.14□□□□□ -0.15
Nup43-201ENSMUST00000040135 OscarQ8VBT3 265 aa14.14□□□□□ -0.15
Nup43-201ENSMUST00000040135 Klra4Q60651 263 aa14.13□□□□□ -0.15
Nup43-201ENSMUST00000040135 Rb1cc1Q9ESK9 1588 aa14.13□□□□□ -0.15
Nup43-201ENSMUST00000040135 Smarca2Q6DIC0 1577 aa14.12□□□□□ -0.15
Nup43-201ENSMUST00000040135 Prdm16A2A935 1275 aa14.11□□□□□ -0.15
Nup43-201ENSMUST00000040135 Dnajc5gQ8C632 165 aa14.11□□□□□ -0.15
Nup43-201ENSMUST00000040135 Pde8bE9Q4S1 865 aa14.07□□□□□ -0.16
Nup43-201ENSMUST00000040135 Slc7a3P70423 618 aa14.05□□□□□ -0.16
Nup43-201ENSMUST00000040135 Znf354bQ9QXT9 601 aa14.05□□□□□ -0.16
Nup43-201ENSMUST00000040135 Mrc2Q64449 1479 aa14.05□□□□□ -0.16
Nup43-201ENSMUST00000040135 Gm11939A2A592 99 aa14.03□□□□□ -0.16
Nup43-201ENSMUST00000040135 Phldb1Q6PDH0 1371 aaKnown RBP14.03□□□□□ -0.16
Nup43-201ENSMUST00000040135 Plekhg3Q4VAC9 1341 aa14.02□□□□□ -0.17
Nup43-201ENSMUST00000040135 Iqgap2Q3UQ44 1575 aa14.01□□□□□ -0.17
Nup43-201ENSMUST00000040135 Wdr62Q3U3T8 1523 aa14.01□□□□□ -0.17
Nup43-201ENSMUST00000040135 Baz1bQ9Z277 1479 aa14□□□□□ -0.17
Nup43-201ENSMUST00000040135 Mllt6B1AR10 1109 aa13.99□□□□□ -0.17
Nup43-201ENSMUST00000040135 Frmpd1A2AKB4 1549 aa13.99□□□□□ -0.17
Nup43-201ENSMUST00000040135 Irx6Q9ER75 438 aa13.98□□□□□ -0.17
Nup43-201ENSMUST00000040135 Myt1lP97500 1187 aa13.97□□□□□ -0.17
Nup43-201ENSMUST00000040135 Unc5aQ8K1S4 898 aa13.97□□□□□ -0.17
Nup43-201ENSMUST00000040135 Ubl4bQ9CQ84 188 aa13.96□□□□□ -0.17
Nup43-201ENSMUST00000040135 Spryd3E9Q9B3 442 aa13.95□□□□□ -0.18
Nup43-201ENSMUST00000040135 Foxd4Q60688 444 aa13.95□□□□□ -0.18
Nup43-201ENSMUST00000040135 Smarca4Q3TKT4 1613 aaKnown RBP13.93□□□□□ -0.18
Nup43-201ENSMUST00000040135 Rnf166Q3U9F6 237 aa13.93□□□□□ -0.18
Nup43-201ENSMUST00000040135 Erbb3Q61526 1339 aa13.92□□□□□ -0.18
Nup43-201ENSMUST00000040135 Taok2Q6ZQ29 1240 aa13.91□□□□□ -0.18
Nup43-201ENSMUST00000040135 Ciz1Q8VEH2 845 aa13.91□□□□□ -0.18
Nup43-201ENSMUST00000040135 Rem2Q8VEL9 341 aa13.91□□□□□ -0.18
Nup43-201ENSMUST00000040135 Col17a1Q07563 1470 aa13.91□□□□□ -0.18
Nup43-201ENSMUST00000040135 Tmc3Q7TQ69 1130 aa13.9□□□□□ -0.18
Nup43-201ENSMUST00000040135 Shroom2A2ALU4 1481 aa13.89□□□□□ -0.19
Nup43-201ENSMUST00000040135 Gabbr2Q80T41 940 aa13.89□□□□□ -0.19
Nup43-201ENSMUST00000040135 E2f4Q8R0K9 410 aa13.89□□□□□ -0.19
Nup43-201ENSMUST00000040135 GnpatP98192 678 aa13.87□□□□□ -0.19
Nup43-201ENSMUST00000040135 Bcl11bQ99PV8 884 aa13.87□□□□□ -0.19
Nup43-201ENSMUST00000040135 Nudt12Q9DCN1 462 aa13.87□□□□□ -0.19
Nup43-201ENSMUST00000040135 Lrriq1Q0P5X1 1673 aa13.86□□□□□ -0.19
Nup43-201ENSMUST00000040135 Farp1F8VPU2 1048 aa13.86□□□□□ -0.19
Nup43-201ENSMUST00000040135 Tpcn2Q8BWC0 731 aa13.86□□□□□ -0.19
Nup43-201ENSMUST00000040135 Slain2Q8CI08 581 aa13.86□□□□□ -0.19
Nup43-201ENSMUST00000040135 XpcP51612 930 aa13.84□□□□□ -0.19
Nup43-201ENSMUST00000040135 VaspP70460 375 aaKnown RBP13.84□□□□□ -0.19
Nup43-201ENSMUST00000040135 Esf1Q3V1V3 845 aaKnown RBP13.84□□□□□ -0.19
Nup43-201ENSMUST00000040135 Ints3Q7TPD0 1041 aaKnown RBP13.84□□□□□ -0.19
Nup43-201ENSMUST00000040135 Zcchc6Q5BLK4 1491 aaKnown RBP13.83□□□□□ -0.2
Nup43-201ENSMUST00000040135 Emid1Q91VF5 444 aa13.83□□□□□ -0.2
Nup43-201ENSMUST00000040135 Unc13aQ4KUS2 1712 aa13.82□□□□□ -0.2
Nup43-201ENSMUST00000040135 Myt1Q8CFC2 1127 aa13.82□□□□□ -0.2
Nup43-201ENSMUST00000040135 Prr7Q3V0I2 269 aa13.81□□□□□ -0.2
Nup43-201ENSMUST00000040135 Baz1aO88379 1555 aa13.8□□□□□ -0.2
Nup43-201ENSMUST00000040135 Psen1P49769 467 aa13.8□□□□□ -0.2
Nup43-201ENSMUST00000040135 Ms4a4cQ9D3F6 226 aa13.8□□□□□ -0.2
Nup43-201ENSMUST00000040135 Slc24a3Q99PD7 645 aa13.78□□□□□ -0.2
Nup43-201ENSMUST00000040135 Fbxo31Q3TQF0 507 aa13.77□□□□□ -0.21
Nup43-201ENSMUST00000040135 Rsf1E9PWW9 1441 aaKnown RBP13.75□□□□□ -0.21
Nup43-201ENSMUST00000040135 LtbrP50284 415 aa13.75□□□□□ -0.21
Nup43-201ENSMUST00000040135 Irf6P97431 467 aa13.74□□□□□ -0.21
Nup43-201ENSMUST00000040135 Ttll13A4Q9F6 804 aa13.73□□□□□ -0.21
Nup43-201ENSMUST00000040135 Crybg2B7ZCC2 1516 aa13.73□□□□□ -0.21
Nup43-201ENSMUST00000040135 Arid3aQ62431 601 aa13.72□□□□□ -0.21
Nup43-201ENSMUST00000040135 Cecr2E9Q2Z1 1453 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 91 ms