RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Cux2P70298 1426 aa11.36□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Plcb2A3KGF7 1181 aa11.36□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Cluap1Q8R3P7 413 aa11.36□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Speer4f1Q9D5Q6 258 aa11.36□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Baz1bQ9Z277 1479 aa11.34□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Cep162Q6ZQ06 1403 aa11.34□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Mphosph9A6H5Y1 991 aa11.34□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Ccdc27Q3V036 639 aa11.34□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Tmco5bQ80X59 307 aa11.34□□□□□ -0.59
Ttc28-201ENSMUST00000040111 Gtf2e1Q9D0D5 440 aa11.33□□□□□ -0.6
Ttc28-201ENSMUST00000040111 Pip4k2bQ80XI4 416 aa11.33□□□□□ -0.6
Ttc28-201ENSMUST00000040111 U2af1Q9D883 239 aaKnown RBP11.32□□□□□ -0.6
Ttc28-201ENSMUST00000040111 CrbnQ8C7D2 445 aa11.32□□□□□ -0.6
Ttc28-201ENSMUST00000040111 Dcaf11Q91VU6 549 aa11.32□□□□□ -0.6
Ttc28-201ENSMUST00000040111 Fan1Q69ZT1 1020 aa11.32□□□□□ -0.6
Ttc28-201ENSMUST00000040111 Lemd3Q9WU40 921 aa11.31□□□□□ -0.6
Ttc28-201ENSMUST00000040111 Sart1Q9Z315 806 aaKnown RBP11.3□□□□□ -0.6
Ttc28-201ENSMUST00000040111 Hsp90b1P08113 802 aaKnown RBP11.3□□□□□ -0.6
Ttc28-201ENSMUST00000040111 Irx3P81067 507 aa11.29□□□□□ -0.6
Ttc28-201ENSMUST00000040111 Slc4a1apE9PX68 744 aa11.27□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Mink1Q9JM52 1308 aa11.26□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Znf326O88291 580 aa11.26□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Pds5bQ4VA53 1446 aaKnown RBP11.26□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Rapgef2Q8CHG7 1496 aa11.25□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Nup155Q99P88 1391 aaKnown RBP11.25□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Rassf8Q8CJ96 419 aa11.25□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Adam1bQ8R534 806 aa11.25□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Pak3Q61036 559 aa11.24□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Htatsf1Q8BGC0 757 aa11.23□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Bcl11bQ99PV8 884 aa11.23□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Chrna2Q91X60 512 aa11.23□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Tnnt2P50752 301 aa11.23□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Utp14aQ640M1 767 aaKnown RBP11.23□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Cc2d1aQ8K1A6 943 aa11.23□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Supt16hQ920B9 1047 aa11.23□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Ccnb3Q810T2 1396 aa11.22□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Ppm1fQ8CGA0 452 aa11.21□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Pes1Q9EQ61 584 aaKnown RBP11.21□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Shq1Q7TMX5 569 aa11.21□□□□□ -0.61
Ttc28-201ENSMUST00000040111 Zfp644E9QA22 1323 aa11.21□□□□□ -0.61
Ttc28-201ENSMUST00000040111 GorabQ8BRM2 368 aa11.21□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Mical1Q8VDP3 1048 aa11.21□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Sh3bp5Q9Z131 463 aa11.2□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Cwc22Q8C5N3 908 aaKnown RBP11.2□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Rtf1A2AQ19 715 aaKnown RBP11.2□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Q3TQI7 289 aaKnown RBP11.19□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Inpp5dQ9ES52 1191 aa11.19□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Synj1Q8CHC4 1574 aa11.19□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Pank3Q8R2W9 370 aa11.18□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Sycp2Q9CUU3 1500 aa11.18□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Bcl2l13P59017 434 aa11.18□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Rock2P70336 1388 aa11.18□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Dnttip2Q8R2M2 758 aaKnown RBP11.17□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Taok2Q6ZQ29 1240 aa11.16□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Ciz1Q8VEH2 845 aa11.16□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Chmp4cQ9D7F7 232 aa11.16□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Iqcf3Q9D498 203 aa11.15□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Ksr2Q3UVC0 959 aa11.15□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Fmn1Q05860 1466 aa11.15□□□□□ -0.62
Ttc28-201ENSMUST00000040111 WrnO09053 1401 aa11.15□□□□□ -0.62
Ttc28-201ENSMUST00000040111 Cabp4Q8VHC5 271 aa11.15□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Tdrd9Q14BI7 1383 aa11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Tmf1B9EKI3 1091 aa11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Srcin1Q9QWI6 1250 aa11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Dhx29Q6PGC1 1365 aaKnown RBP11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 CftrP26361 1476 aa11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Mfap1aC0HKD8 439 aaKnown RBP11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Mfap1bC0HKD9 439 aaKnown RBP11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Pabpn1Q8CCS6 302 aaKnown RBP11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Shroom4Q1W617 1475 aa11.14□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Chmp3Q9CQ10 224 aa11.13□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Golga2Q921M4 999 aa11.13□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Rwdd1Q9CQK7 243 aa11.13□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Mia2Q91ZV0 1396 aa11.12□□□□□ -0.63
Ttc28-201ENSMUST00000040111 ChgaP26339 463 aaKnown RBP11.12□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Ccdc146E9Q9F7 977 aa11.11□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Erich6bQ9D4S6 220 aa11.11□□□□□ -0.63
Ttc28-201ENSMUST00000040111 NudcO35685 332 aaKnown RBP11.11□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Ppm1gQ61074 542 aa11.11□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Rad54l2Q99NG0 1466 aa11.1□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Usp40Q8BWR4 1235 aa11.1□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Slc4a10Q5DTL9 1118 aa11.1□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Fyco1Q8VDC1 1437 aa11.1□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Nutm1Q8BHP2 1126 aa11.09□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Tsen2Q6P7W5 460 aa11.09□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Fhad1A6PWD2 1420 aa11.09□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Arhgap35Q91YM2 1499 aa11.09□□□□□ -0.63
Ttc28-201ENSMUST00000040111 Map3k5O35099 1380 aa11.09□□□□□ -0.63
Ttc28-201ENSMUST00000040111 PnnO35691 725 aaKnown RBP11.08□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Phldb1Q6PDH0 1371 aaKnown RBP11.08□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Brpf1B2RRD7 1212 aa11.08□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Nectin2P32507 530 aa11.08□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Gm21190A0A0G2JGJ6 266 aa11.07□□□□□ -0.64
Ttc28-201ENSMUST00000040111 FosbP13346 338 aa11.07□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Q9D9H8 365 aa11.07□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Esx1O88933 382 aa11.06□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Evi5lH3BKQ3 813 aa11.06□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Anapc15P60007 132 aa11.06□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Usp47Q8BY87 1376 aa11.06□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Carmil1Q6EDY6 1374 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 48.4 ms