RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Neo1P97798 1493 aa12.65□□□□□ -0.38
Rnf43-201ENSMUST00000040089 Amer1Q7TS75 1132 aa12.64□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Plekhh2Q8C115 1491 aa12.63□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Kif21aQ9QXL2 1672 aa12.63□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Samd9lQ69Z37 1561 aa12.62□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Dhx57Q6P5D3 1388 aaKnown RBP12.62□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Card11Q8CIS0 1159 aa12.62□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Disp1Q3TDN0 1521 aa12.61□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Arhgef5E9Q7D5 1581 aa12.61□□□□□ -0.39
Rnf43-201ENSMUST00000040089 TnnQ80Z71 1560 aa12.6□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Gm20521D3Z5F7 333 aa12.6□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Polr1aO35134 1717 aaKnown RBP12.6□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Ifit1bl1D3Z6F0 470 aa12.6□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Gm14025A2AP89 1413 aa12.59□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Nup155Q99P88 1391 aaKnown RBP12.59□□□□□ -0.39
Rnf43-201ENSMUST00000040089 PrkcshO08795 521 aa12.59□□□□□ -0.39
Rnf43-201ENSMUST00000040089 Map3k5O35099 1380 aa12.58□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Srpk2O54781 681 aaKnown RBP12.58□□□□□ -0.4
Rnf43-201ENSMUST00000040089 MlecQ6ZQI3 291 aaKnown RBP12.58□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Nlrp6Q91WS2 869 aa12.57□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Cnga1P29974 684 aa12.57□□□□□ -0.4
Rnf43-201ENSMUST00000040089 PxdnQ3UQ28 1475 aa12.56□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Ecm2Q5FW85 670 aa12.56□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Wwc2Q6NXJ0 1187 aa12.56□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Hdac5Q9Z2V6 1113 aa12.56□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Rundc1Q0VDN7 615 aa12.55□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Stk26Q99JT2 416 aa12.55□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Pcf11G3X9Z4 1553 aa12.54□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Rangap1P46061 589 aaKnown RBP12.54□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Nolc1E9Q5C9 702 aaKnown RBP12.54□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Rad21Q61550 635 aaKnown RBP12.54□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Pla2r1Q62028 1487 aa12.53□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Spag9Q58A65 1321 aaKnown RBP12.53□□□□□ -0.4
Rnf43-201ENSMUST00000040089 Tiam1Q60610 1591 aa12.52□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Ncoa2Q61026 1462 aa12.51□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Znf710Q3U288 666 aa12.51□□□□□ -0.41
Rnf43-201ENSMUST00000040089 NgefQ8CHT1 710 aa12.51□□□□□ -0.41
Rnf43-201ENSMUST00000040089 TchhA0A0B4J1F9 1599 aa12.51□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Slc4a3P16283 1227 aa12.51□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Wdr43Q6ZQL4 677 aaKnown RBP12.51□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Unc13aQ4KUS2 1712 aa12.5□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Supt16hQ920B9 1047 aa12.5□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Ankrd26Q811D2 1581 aa12.49□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Gpatch8A2A6A1 1505 aa12.49□□□□□ -0.41
Rnf43-201ENSMUST00000040089 NeflP08551 543 aa12.49□□□□□ -0.41
Rnf43-201ENSMUST00000040089 UacaQ8CGB3 1411 aa12.49□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Polr3glQ8R0C0 218 aa12.48□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Usp47Q8BY87 1376 aa12.48□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Ccdc141E9Q8Q6 1531 aa12.48□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Mug1P28665 1476 aa12.48□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Stag3O70576 1240 aa12.48□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Fam163aQ8CAA5 168 aa12.47□□□□□ -0.41
Rnf43-201ENSMUST00000040089 WizO88286 1684 aaKnown RBP12.47□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Arid4bA2CG63 1314 aaKnown RBP12.46□□□□□ -0.41
Rnf43-201ENSMUST00000040089 Arhgap5P97393 1501 aa12.46□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Ncapd3Q6ZQK0 1506 aa12.46□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Fan1Q69ZT1 1020 aa12.46□□□□□ -0.42
Rnf43-201ENSMUST00000040089 NexmifQ5DTT1 1515 aa12.45□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Exosc9Q9JHI7 438 aaKnown RBP12.45□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Magi3Q9EQJ9 1476 aa12.45□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Slx4Q6P1D7 1565 aa12.44□□□□□ -0.42
Rnf43-201ENSMUST00000040089 IqubQ8CDK3 788 aa12.44□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Pde4cQ3UEI1 686 aa12.44□□□□□ -0.42
Rnf43-201ENSMUST00000040089 4933416C03RikQ3V063 378 aa12.44□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Txndc2Q6P902 515 aa12.43□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Gm156Q58A37 223 aa12.43□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Ncoa3O09000 1398 aa12.43□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Ythdc2B2RR83 1445 aaKnown RBP12.43□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Znf316Q6PGE4 1016 aa12.42□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Ttll5Q8CHB8 1328 aa12.42□□□□□ -0.42
Rnf43-201ENSMUST00000040089 ArxO35085 564 aa12.42□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Magi1Q6RHR9 1471 aa12.42□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Fhad1A6PWD2 1420 aa12.4□□□□□ -0.42
Rnf43-201ENSMUST00000040089 Dhx9O70133 1380 aaKnown RBP12.39□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Gm1043A0A140LJC2 1431 aa12.38□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Afap1Q80YS6 731 aa12.38□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Ofd1Q80Z25 1017 aa12.38□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Exoc6Q8R313 802 aa12.38□□□□□ -0.43
Rnf43-201ENSMUST00000040089 A2mQ6GQT1 1474 aa12.38□□□□□ -0.43
Rnf43-201ENSMUST00000040089 3425401B19RikD3Z1D3 1412 aa12.38□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Abcc5Q9R1X5 1436 aa12.38□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Nup160Q9Z0W3 1402 aaKnown RBP12.38□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Cwc22Q8C5N3 908 aaKnown RBP12.37□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Shroom2A2ALU4 1481 aa12.37□□□□□ -0.43
Rnf43-201ENSMUST00000040089 BC005561E9Q5E2 1589 aa12.37□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Psme1P97371 249 aa12.36□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Lrriq1Q0P5X1 1673 aa12.36□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Ccdc27Q3V036 639 aa12.36□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Srcin1Q9QWI6 1250 aa12.36□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Gtf2e1Q9D0D5 440 aa12.35□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Trim26Q99PN3 545 aa12.35□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Atp10dQ8K2X1 1416 aa12.35□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Sox12Q04890 314 aa12.34□□□□□ -0.43
Rnf43-201ENSMUST00000040089 Vps8Q0P5W1 1427 aa12.34□□□□□ -0.43
Rnf43-201ENSMUST00000040089 DaxxO35613 739 aa12.33□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Utp14aQ640M1 767 aaKnown RBP12.32□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Ccdc9Q8VC31 543 aaKnown RBP12.32□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Shq1Q7TMX5 569 aa12.31□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Upf2A2AT37 1269 aaKnown RBP12.31□□□□□ -0.44
Rnf43-201ENSMUST00000040089 Apbb1Q9QXJ1 710 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 124.6 ms