RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Birc3O08863 600 aa18.19■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Iffo2Q8R2V2 512 aa18.18■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Nol10Q5RJG1 687 aaKnown RBP18.17■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Hspa5P20029 655 aaKnown RBP18.16■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Eif4g2Q62448 906 aaKnown RBP18.15■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Q3TQI7 289 aaKnown RBP18.15■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Prm3Q62100 101 aa18.15■□□□□ 0.5
Col4a1-201ENSMUST00000033898 CrebrfQ8CDG5 640 aaKnown RBP18.14■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Pibf1E9Q6K3 756 aa18.14■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Arid3cA6PWV5 409 aa18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 MlecQ6ZQI3 291 aaKnown RBP18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Tnnt2P50752 301 aa18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Eea1Q8BL66 1411 aa18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Ifit1bl1D3Z6F0 470 aa18.13■□□□□ 0.49
Col4a1-201ENSMUST00000033898 HnrnpuQ8VEK3 800 aaKnown RBP18.12■□□□□ 0.49
Col4a1-201ENSMUST00000033898 MecomP14404 1042 aa18.12■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Rundc1Q0VDN7 615 aa18.12■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Supt16hQ920B9 1047 aa18.12■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Rsf1E9PWW9 1441 aaKnown RBP18.11■□□□□ 0.49
Col4a1-201ENSMUST00000033898 U2af1Q9D883 239 aaKnown RBP18.11■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Mfap1aC0HKD8 439 aaKnown RBP18.1■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Mfap1bC0HKD9 439 aaKnown RBP18.1■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Noc3lQ8VI84 807 aaKnown RBP18.1■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Psme1P97371 249 aa18.1■□□□□ 0.49
Col4a1-201ENSMUST00000033898 GorabQ8BRM2 368 aa18.09■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Chmp3Q9CQ10 224 aa18.09■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Sart3Q9JLI8 962 aaKnown RBP18.09■□□□□ 0.49
Col4a1-201ENSMUST00000033898 Gm973E9Q295 1059 aa18.08■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Ccdc18Q640L5 1455 aa18.07■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Gpatch11Q3UFS4 262 aa18.07■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Brpf1B2RRD7 1212 aa18.07■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Ppm1fQ8CGA0 452 aa18.07■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Vps53Q8CCB4 832 aa18.06■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Zfp777B9EKF4 885 aa18.05■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Gtf2e1Q9D0D5 440 aa18.05■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Map4P27546 1125 aaKnown RBP18.04■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Chmp5Q9D7S9 219 aa18.04■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Sin3aQ60520 1274 aaKnown RBP18.04■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Fhad1A6PWD2 1420 aa18.03■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Tpm3-rs7D3Z2H9 248 aa18.03■□□□□ 0.48
Col4a1-201ENSMUST00000033898 MsnP26041 577 aaKnown RBP18.03■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Dcaf11Q91VU6 549 aa18.02■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Irx3P81067 507 aa18.02■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Exoc6Q8R313 802 aa18.02■□□□□ 0.48
Col4a1-201ENSMUST00000033898 Txndc2Q6P902 515 aa18.02■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Ercc6F8VPZ5 1481 aa18■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Calcoco2A2A6M5 331 aa18■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Dnai1Q8C0M8 701 aa17.99■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Slc4a1apE9PX68 744 aa17.99■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Tmf1B9EKI3 1091 aa17.98■□□□□ 0.47
Col4a1-201ENSMUST00000033898 CrbnQ8C7D2 445 aa17.98■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Arid4aF8VPQ2 1261 aaKnown RBP17.98■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Pkd2O35245 966 aa17.97■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Mbd3Q9Z2D8 285 aaKnown RBP17.97■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Kiaa0754Q69ZZ9 979 aa17.97■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Golga2Q921M4 999 aa17.97■□□□□ 0.47
Col4a1-201ENSMUST00000033898 EspnQ9ET47 871 aa17.96■□□□□ 0.47
Col4a1-201ENSMUST00000033898 AU015836B2RUM3 263 aa17.96■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Taok2Q6ZQ29 1240 aa17.96■□□□□ 0.47
Col4a1-201ENSMUST00000033898 Dnai2A2AC93 623 aa17.95■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Ncbp3Q8BZR9 615 aaKnown RBP17.95■□□□□ 0.46
Col4a1-201ENSMUST00000033898 AknaQ80VW7 1404 aa17.95■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Bcl11aQ9QYE3 773 aa17.94■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Tomm22Q9CPQ3 142 aa17.94■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Spag9Q58A65 1321 aaKnown RBP17.93■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Pak3Q61036 559 aa17.93■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Trak1Q6PD31 939 aa17.93■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Tcerg1Q8CGF7 1100 aaKnown RBP17.92■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Ksr2Q3UVC0 959 aa17.92■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Slc4a10Q5DTL9 1118 aa17.91■□□□□ 0.46
Col4a1-201ENSMUST00000033898 R3hcc1Q8BSI6 488 aa17.91■□□□□ 0.46
Col4a1-201ENSMUST00000033898 SlkO54988 1233 aa17.91■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Tpd52l1O54818 204 aa17.91■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Cald1E9QA15 768 aaKnown RBP17.9■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Samd1D3YXK1 519 aa17.9■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Mia2Q91ZV0 1396 aa17.9■□□□□ 0.46
Col4a1-201ENSMUST00000033898 Ipo8Q7TMY7 1010 aa17.89■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Golga3P55937 1487 aa17.89■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Chrna2Q91X60 512 aa17.89■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Ciz1Q8VEH2 845 aa17.88■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Ccer1Q9CQL2 403 aa17.88■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Ccdc146E9Q9F7 977 aa17.88■□□□□ 0.45
Col4a1-201ENSMUST00000033898 BccipQ9CWI3 316 aa17.88■□□□□ 0.45
Col4a1-201ENSMUST00000033898 SetQ9EQU5 289 aaKnown RBP17.87■□□□□ 0.45
Col4a1-201ENSMUST00000033898 RdxP26043 583 aaKnown RBP17.87■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Kif27Q7M6Z4 1394 aa17.86■□□□□ 0.45
Col4a1-201ENSMUST00000033898 PtmsQ9D0J8 101 aaKnown RBP17.86■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Pde3bQ61409 1100 aa17.85■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Kri1Q8VDQ9 704 aaKnown RBP17.84■□□□□ 0.45
Col4a1-201ENSMUST00000033898 Zscan21Q07231 555 aa17.84■□□□□ 0.45
Col4a1-201ENSMUST00000033898 ChgaP26339 463 aaKnown RBP17.83■□□□□ 0.45
Col4a1-201ENSMUST00000033898 HdgfP51859 237 aaKnown RBP17.83■□□□□ 0.44
Col4a1-201ENSMUST00000033898 AppP12023 770 aa17.83■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Fam193aQ8CGI1 1231 aaKnown RBP17.83■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Tpm3P21107 285 aaKnown RBP17.82■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Rock2P70336 1388 aa17.82■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Cc2d1aQ8K1A6 943 aa17.82■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Smarce1O54941 411 aaKnown RBP17.81■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Rpap1Q80TE0 1409 aa17.81■□□□□ 0.44
Col4a1-201ENSMUST00000033898 Drc7Q6V3W6 876 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms