RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Lmod2Q3UHZ5 550 aa18.11■□□□□ 0.49
Ccdc28b-201ENSMUST00000030586 Naip1Q9QWK5 1403 aa18.1■□□□□ 0.49
Ccdc28b-201ENSMUST00000030586 Fndc1E9Q043 1732 aa18.09■□□□□ 0.49
Ccdc28b-201ENSMUST00000030586 A2mQ6GQT1 1474 aa18.07■□□□□ 0.48
Ccdc28b-201ENSMUST00000030586 Dhx57Q6P5D3 1388 aaKnown RBP18.07■□□□□ 0.48
Ccdc28b-201ENSMUST00000030586 Fam208aQ69ZR9 1610 aaKnown RBP18.05■□□□□ 0.48
Ccdc28b-201ENSMUST00000030586 Mlh3A0A1Y7VMP7 1443 aa18.04■□□□□ 0.48
Ccdc28b-201ENSMUST00000030586 Peg3Q3URU2 1571 aa18■□□□□ 0.47
Ccdc28b-201ENSMUST00000030586 Cdc42bpaQ3UU96 1719 aa18■□□□□ 0.47
Ccdc28b-201ENSMUST00000030586 Tiam1Q60610 1591 aa18■□□□□ 0.47
Ccdc28b-201ENSMUST00000030586 NexmifQ5DTT1 1515 aa17.99■□□□□ 0.47
Ccdc28b-201ENSMUST00000030586 Abca9Q8K449 1623 aa17.98■□□□□ 0.47
Ccdc28b-201ENSMUST00000030586 Plekhg3Q4VAC9 1341 aa17.96■□□□□ 0.46
Ccdc28b-201ENSMUST00000030586 Plppr3Q7TPB0 716 aa17.93■□□□□ 0.46
Ccdc28b-201ENSMUST00000030586 Lmtk2Q3TYD6 1471 aa17.91■□□□□ 0.46
Ccdc28b-201ENSMUST00000030586 Arhgap5P97393 1501 aa17.89■□□□□ 0.45
Ccdc28b-201ENSMUST00000030586 Rnf17Q99MV7 1640 aa17.89■□□□□ 0.45
Ccdc28b-201ENSMUST00000030586 Ccnb3Q810T2 1396 aa17.89■□□□□ 0.45
Ccdc28b-201ENSMUST00000030586 Trappc8E9PWG2 1437 aa17.89■□□□□ 0.45
Ccdc28b-201ENSMUST00000030586 Tdrd9Q14BI7 1383 aa17.88■□□□□ 0.45
Ccdc28b-201ENSMUST00000030586 Alpk3Q924C5 1678 aa17.87■□□□□ 0.45
Ccdc28b-201ENSMUST00000030586 Arhgef40Q3UPH7 1517 aa17.85■□□□□ 0.45
Ccdc28b-201ENSMUST00000030586 Synj2Q9D2G5 1434 aa17.84■□□□□ 0.45
Ccdc28b-201ENSMUST00000030586 Adcy10Q8C0T9 1614 aa17.83■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Kiaa0556Q8C753 1610 aa17.83■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Lemd3Q9WU40 921 aa17.82■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Abcc3B2RX12 1523 aa17.82■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Gm32742A0A1B0GT42 1604 aa17.81■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Kidins220E9Q9B7 1793 aa17.81■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Ptch1Q61115 1434 aa17.8■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Caskin1Q6P9K8 1431 aa17.8■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 OvosQ3UU35 1456 aa17.79■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Hecw2Q6I6G8 1578 aa17.79■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Yeats2Q3TUF7 1407 aa17.78■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Cypt1Q8CH20 168 aa17.77■□□□□ 0.44
Ccdc28b-201ENSMUST00000030586 Ncapd3Q6ZQK0 1506 aa17.77■□□□□ 0.43
Ccdc28b-201ENSMUST00000030586 Sart1Q9Z315 806 aaKnown RBP17.75■□□□□ 0.43
Ccdc28b-201ENSMUST00000030586 Cfap74Q3UY96 1578 aa17.74■□□□□ 0.43
Ccdc28b-201ENSMUST00000030586 Kdm6bQ5NCY0 1641 aa17.74■□□□□ 0.43
Ccdc28b-201ENSMUST00000030586 Kdm5cP41230 1554 aa17.74■□□□□ 0.43
Ccdc28b-201ENSMUST00000030586 Naip2Q9QUK4 1447 aa17.72■□□□□ 0.43
Ccdc28b-201ENSMUST00000030586 Dip2cE9PWR4 1557 aa17.72■□□□□ 0.43
Ccdc28b-201ENSMUST00000030586 MlecQ6ZQI3 291 aaKnown RBP17.7■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 3425401B19RikD3Z1D3 1412 aa17.69■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 Atp10aO54827 1508 aa17.68■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 Pdcd11Q6NS46 1862 aaKnown RBP17.67■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 Qser1A2BIE1 1698 aa17.67■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 RereQ80TZ9 1558 aa17.66■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 NpatQ8BMA5 1420 aa17.65■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 Cdk11bP24788 784 aaKnown RBP17.65■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 Abcc5Q9R1X5 1436 aa17.64■□□□□ 0.42
Ccdc28b-201ENSMUST00000030586 Map3k5O35099 1380 aa17.64■□□□□ 0.41
Ccdc28b-201ENSMUST00000030586 Adamtsl3G3UXC7 1706 aa17.63■□□□□ 0.41
Ccdc28b-201ENSMUST00000030586 Zmym4A2A791 1549 aaKnown RBP17.62■□□□□ 0.41
Ccdc28b-201ENSMUST00000030586 Cdc42bpbQ7TT50 1713 aa17.61■□□□□ 0.41
Ccdc28b-201ENSMUST00000030586 Kif14L0N7N1 1674 aaKnown RBP17.61■□□□□ 0.41
Ccdc28b-201ENSMUST00000030586 Nos1Q9Z0J4 1429 aa17.59■□□□□ 0.41
Ccdc28b-201ENSMUST00000030586 Cabp1Q9JLK7 227 aa17.56■□□□□ 0.4
Ccdc28b-201ENSMUST00000030586 Rrp7aQ9D1C9 280 aaKnown RBP17.55■□□□□ 0.4
Ccdc28b-201ENSMUST00000030586 Mtus2Q3UHD3 1353 aa17.54■□□□□ 0.4
Ccdc28b-201ENSMUST00000030586 Hecw1Q8K4P8 1604 aa17.54■□□□□ 0.4
Ccdc28b-201ENSMUST00000030586 Plekhh2Q8C115 1491 aa17.53■□□□□ 0.4
Ccdc28b-201ENSMUST00000030586 Neurl4Q5NCX5 1563 aa17.53■□□□□ 0.4
Ccdc28b-201ENSMUST00000030586 Prdm16A2A935 1275 aa17.51■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Chic2Q9D9G3 165 aa17.51■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Mast1Q9R1L5 1570 aa17.51■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Fhod3Q76LL6 1578 aa17.5■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Naip6Q9JIB6 1403 aa17.5■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Dennd4bQ3U1Y4 1499 aa17.49■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Camsap2Q8C1B1 1461 aa17.49■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Cdc42bpgQ80UW5 1551 aa17.49■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Il16O54824 1322 aa17.48■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Afap1Q80YS6 731 aa17.48■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Znf518aB2RRF6 1478 aaKnown RBP17.47■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Adgrb2Q8CGM1 1561 aa17.47■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 SphkapQ6NSW3 1687 aa17.47■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Cul9Q80TT8 1865 aa17.47■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 UbtfP25976 765 aaKnown RBP17.46■□□□□ 0.39
Ccdc28b-201ENSMUST00000030586 Xrn1P97789 1719 aaKnown RBP17.44■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Brwd3A2AHJ4 1799 aa17.44■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Gli2Q0VGT2 1544 aa17.44■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Safb2Q80YR5 991 aaKnown RBP17.44■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Fmn2Q9JL04 1578 aa17.44■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 PtprmP28828 1452 aa17.44■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Kif3bQ61771 747 aa17.43■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Adgrl2Q8JZZ7 1487 aa17.43■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Trpm1Q2TV84 1622 aa17.43■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Ssh2Q5SW75 1423 aa17.41■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 MyclP10166 368 aa17.41■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Myom2Q14BI5 1463 aa17.41■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Kdm3bQ6ZPY7 1562 aa17.4■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Spag9Q58A65 1321 aaKnown RBP17.4■□□□□ 0.38
Ccdc28b-201ENSMUST00000030586 Topbp1Q6ZQF0 1515 aa17.38■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Cyb5rlB1AS42 316 aa17.38■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Cfap65Q3V0B4 1847 aa17.37■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Naip5Q9R016 1403 aa17.36■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Uggt2E9Q4X2 1504 aa17.36■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Ahdc1Q6PAL7 1594 aaKnown RBP17.36■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Fam50aQ9WV03 339 aaKnown RBP17.35■□□□□ 0.37
Ccdc28b-201ENSMUST00000030586 Talpid3E9PV87 1520 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms