RNA–Protein interactions for RNA: ENSMUST00000022369.8

Vcl-201, Transcript of Vinculin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcl, Length 5,267 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcl-201ENSMUST00000022369 Mak16Q8BGS0 296 aaKnown RBP16.38■□□□□ 0.21
Vcl-201ENSMUST00000022369 Baz1bQ9Z277 1479 aa16.38■□□□□ 0.21
Vcl-201ENSMUST00000022369 CntlnA2AM05 1397 aa16.37■□□□□ 0.21
Vcl-201ENSMUST00000022369 Dnai1Q8C0M8 701 aa16.37■□□□□ 0.21
Vcl-201ENSMUST00000022369 Pes1Q9EQ61 584 aaKnown RBP16.37■□□□□ 0.21
Vcl-201ENSMUST00000022369 EspnQ9ET47 871 aa16.37■□□□□ 0.21
Vcl-201ENSMUST00000022369 Ifit1bl1D3Z6F0 470 aa16.36■□□□□ 0.21
Vcl-201ENSMUST00000022369 Trak1Q6PD31 939 aa16.36■□□□□ 0.21
Vcl-201ENSMUST00000022369 Gtf2e1Q9D0D5 440 aa16.36■□□□□ 0.21
Vcl-201ENSMUST00000022369 MccE9PWI3 1003 aa16.36■□□□□ 0.21
Vcl-201ENSMUST00000022369 Pds5bQ4VA53 1446 aaKnown RBP16.36■□□□□ 0.21
Vcl-201ENSMUST00000022369 Cabp1Q9JLK7 227 aa16.36■□□□□ 0.21
Vcl-201ENSMUST00000022369 PnnO35691 725 aaKnown RBP16.35■□□□□ 0.21
Vcl-201ENSMUST00000022369 Bcl11aQ9QYE3 773 aa16.34■□□□□ 0.21
Vcl-201ENSMUST00000022369 Adam1bQ8R534 806 aa16.34■□□□□ 0.21
Vcl-201ENSMUST00000022369 AU015836B2RUM3 263 aa16.32■□□□□ 0.2
Vcl-201ENSMUST00000022369 Ipo9Q91YE6 1041 aa16.31■□□□□ 0.2
Vcl-201ENSMUST00000022369 Rtn4Q99P72 1162 aaKnown RBP16.3■□□□□ 0.2
Vcl-201ENSMUST00000022369 PtmsQ9D0J8 101 aaKnown RBP16.3■□□□□ 0.2
Vcl-201ENSMUST00000022369 Rpap1Q80TE0 1409 aa16.28■□□□□ 0.2
Vcl-201ENSMUST00000022369 Golga2Q921M4 999 aa16.28■□□□□ 0.2
Vcl-201ENSMUST00000022369 Dnttip2Q8R2M2 758 aaKnown RBP16.28■□□□□ 0.2
Vcl-201ENSMUST00000022369 U2af1Q9D883 239 aaKnown RBP16.28■□□□□ 0.2
Vcl-201ENSMUST00000022369 Rtf1A2AQ19 715 aaKnown RBP16.26■□□□□ 0.19
Vcl-201ENSMUST00000022369 Sart3Q9JLI8 962 aaKnown RBP16.25■□□□□ 0.19
Vcl-201ENSMUST00000022369 U2surpQ6NV83 1029 aaKnown RBP16.25■□□□□ 0.19
Vcl-201ENSMUST00000022369 Dcaf11Q91VU6 549 aa16.25■□□□□ 0.19
Vcl-201ENSMUST00000022369 Rock2P70336 1388 aa16.25■□□□□ 0.19
Vcl-201ENSMUST00000022369 Ipo8Q7TMY7 1010 aa16.25■□□□□ 0.19
Vcl-201ENSMUST00000022369 Erich6bQ9D4S6 220 aa16.23■□□□□ 0.19
Vcl-201ENSMUST00000022369 Tmco5bQ80X59 307 aa16.23■□□□□ 0.19
Vcl-201ENSMUST00000022369 Stk26Q99JT2 416 aa16.22■□□□□ 0.19
Vcl-201ENSMUST00000022369 Sh3bp5Q9Z131 463 aa16.22■□□□□ 0.19
Vcl-201ENSMUST00000022369 Srcin1Q9QWI6 1250 aa16.21■□□□□ 0.19
Vcl-201ENSMUST00000022369 Nup155Q99P88 1391 aaKnown RBP16.21■□□□□ 0.19
Vcl-201ENSMUST00000022369 Dhx57Q6P5D3 1388 aaKnown RBP16.21■□□□□ 0.18
Vcl-201ENSMUST00000022369 Pde3bQ61409 1100 aa16.21■□□□□ 0.18
Vcl-201ENSMUST00000022369 Lemd3Q9WU40 921 aa16.21■□□□□ 0.18
Vcl-201ENSMUST00000022369 MyclP10166 368 aa16.2■□□□□ 0.18
Vcl-201ENSMUST00000022369 CftrP26361 1476 aa16.2■□□□□ 0.18
Vcl-201ENSMUST00000022369 Cluap1Q8R3P7 413 aa16.19■□□□□ 0.18
Vcl-201ENSMUST00000022369 AknaQ80VW7 1404 aa16.19■□□□□ 0.18
Vcl-201ENSMUST00000022369 Gm973E9Q295 1059 aa16.18■□□□□ 0.18
Vcl-201ENSMUST00000022369 Carmil1Q6EDY6 1374 aa16.18■□□□□ 0.18
Vcl-201ENSMUST00000022369 Plekhh2Q8C115 1491 aa16.18■□□□□ 0.18
Vcl-201ENSMUST00000022369 Crybg2B7ZCC2 1516 aa16.17■□□□□ 0.18
Vcl-201ENSMUST00000022369 CrbnQ8C7D2 445 aa16.17■□□□□ 0.18
Vcl-201ENSMUST00000022369 Arid3cA6PWV5 409 aa16.16■□□□□ 0.18
Vcl-201ENSMUST00000022369 Plin1Q8CGN5 517 aa16.16■□□□□ 0.18
Vcl-201ENSMUST00000022369 Mfap1aC0HKD8 439 aaKnown RBP16.16■□□□□ 0.18
Vcl-201ENSMUST00000022369 Mfap1bC0HKD9 439 aaKnown RBP16.16■□□□□ 0.18
Vcl-201ENSMUST00000022369 Clstn1Q9EPL2 979 aa16.16■□□□□ 0.18
Vcl-201ENSMUST00000022369 Rapgef2Q8CHG7 1496 aa16.16■□□□□ 0.18
Vcl-201ENSMUST00000022369 Rassf8Q8CJ96 419 aa16.15■□□□□ 0.18
Vcl-201ENSMUST00000022369 Sycp2Q9CUU3 1500 aa16.15■□□□□ 0.18
Vcl-201ENSMUST00000022369 Birc3O08863 600 aa16.15■□□□□ 0.18
Vcl-201ENSMUST00000022369 Pcmtd1P59913 357 aa16.15■□□□□ 0.18
Vcl-201ENSMUST00000022369 Ccar1Q8CH18 1146 aaKnown RBP16.14■□□□□ 0.17
Vcl-201ENSMUST00000022369 Q3TQI7 289 aaKnown RBP16.13■□□□□ 0.17
Vcl-201ENSMUST00000022369 Znf330Q922H9 316 aa16.13■□□□□ 0.17
Vcl-201ENSMUST00000022369 Cux2P70298 1426 aa16.13■□□□□ 0.17
Vcl-201ENSMUST00000022369 UacaQ8CGB3 1411 aa16.13■□□□□ 0.17
Vcl-201ENSMUST00000022369 Stard8Q8K031 1019 aa16.13■□□□□ 0.17
Vcl-201ENSMUST00000022369 Smg6P61406 1418 aaKnown RBP16.13■□□□□ 0.17
Vcl-201ENSMUST00000022369 Slc4a1apE9PX68 744 aa16.13■□□□□ 0.17
Vcl-201ENSMUST00000022369 Ksr2Q3UVC0 959 aa16.12■□□□□ 0.17
Vcl-201ENSMUST00000022369 Ccnb3Q810T2 1396 aa16.11■□□□□ 0.17
Vcl-201ENSMUST00000022369 Ppp1r18Q8BQ30 594 aa16.11■□□□□ 0.17
Vcl-201ENSMUST00000022369 Eif4g2Q62448 906 aaKnown RBP16.1■□□□□ 0.17
Vcl-201ENSMUST00000022369 Kif3bQ61771 747 aa16.1■□□□□ 0.17
Vcl-201ENSMUST00000022369 Spag9Q58A65 1321 aaKnown RBP16.09■□□□□ 0.17
Vcl-201ENSMUST00000022369 Anapc15P60007 132 aa16.09■□□□□ 0.17
Vcl-201ENSMUST00000022369 Iffo2Q8R2V2 512 aa16.09■□□□□ 0.17
Vcl-201ENSMUST00000022369 Nolc1E9Q5C9 702 aaKnown RBP16.09■□□□□ 0.17
Vcl-201ENSMUST00000022369 MsnP26041 577 aaKnown RBP16.09■□□□□ 0.17
Vcl-201ENSMUST00000022369 Usp47Q8BY87 1376 aa16.08■□□□□ 0.16
Vcl-201ENSMUST00000022369 Ecm2Q5FW85 670 aa16.07■□□□□ 0.16
Vcl-201ENSMUST00000022369 Tnnt2P50752 301 aa16.07■□□□□ 0.16
Vcl-201ENSMUST00000022369 GorabQ8BRM2 368 aa16.07■□□□□ 0.16
Vcl-201ENSMUST00000022369 MecomP14404 1042 aa16.06■□□□□ 0.16
Vcl-201ENSMUST00000022369 Smarce1O54941 411 aaKnown RBP16.05■□□□□ 0.16
Vcl-201ENSMUST00000022369 Psme1P97371 249 aa16.05■□□□□ 0.16
Vcl-201ENSMUST00000022369 Cecr2E9Q2Z1 1453 aa16.05■□□□□ 0.16
Vcl-201ENSMUST00000022369 Calcoco2A2A6M5 331 aa16.05■□□□□ 0.16
Vcl-201ENSMUST00000022369 CgnP59242 1191 aa16.05■□□□□ 0.16
Vcl-201ENSMUST00000022369 Pank3Q8R2W9 370 aa16.04■□□□□ 0.16
Vcl-201ENSMUST00000022369 Tnnt1O88346 262 aa16.04■□□□□ 0.16
Vcl-201ENSMUST00000022369 ChgaP26339 463 aaKnown RBP16.04■□□□□ 0.16
Vcl-201ENSMUST00000022369 R3hcc1Q8BSI6 488 aa16.04■□□□□ 0.16
Vcl-201ENSMUST00000022369 Sart1Q9Z315 806 aaKnown RBP16.03■□□□□ 0.16
Vcl-201ENSMUST00000022369 CenpjQ569L8 1344 aa16.03■□□□□ 0.16
Vcl-201ENSMUST00000022369 Fan1Q69ZT1 1020 aa16.03■□□□□ 0.16
Vcl-201ENSMUST00000022369 Rrp12Q6P5B0 1295 aaKnown RBP16.03■□□□□ 0.16
Vcl-201ENSMUST00000022369 Smarca2Q6DIC0 1577 aa16.02■□□□□ 0.16
Vcl-201ENSMUST00000022369 Nol10Q5RJG1 687 aaKnown RBP16.02■□□□□ 0.16
Vcl-201ENSMUST00000022369 Atp6v1dP57746 247 aa16.02■□□□□ 0.15
Vcl-201ENSMUST00000022369 Txndc2Q6P902 515 aa16.02■□□□□ 0.15
Vcl-201ENSMUST00000022369 Synj1Q8CHC4 1574 aa16.01■□□□□ 0.15
Vcl-201ENSMUST00000022369 Cgnl1Q6AW69 1298 aa16.01■□□□□ 0.15
Vcl-201ENSMUST00000022369 Tsen2Q6P7W5 460 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms