RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Gm20521D3Z5F7 333 aa10.66□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Pes1Q9EQ61 584 aaKnown RBP10.66□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Rapgef2Q8CHG7 1496 aa10.66□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Map7O88735 730 aa10.66□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Mia2Q91ZV0 1396 aa10.66□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Anks4bQ8K3X6 423 aa10.65□□□□□ -0.7
Ssr1-201ENSMUST00000021864 Shroom4Q1W617 1475 aa10.64□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Htatsf1Q8BGC0 757 aa10.64□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Cwc22Q8C5N3 908 aaKnown RBP10.64□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Txndc2Q6P902 515 aa10.63□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Clstn1Q9EPL2 979 aa10.63□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Aplp2Q06335 707 aa10.63□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Rtn4Q99P72 1162 aaKnown RBP10.63□□□□□ -0.71
Ssr1-201ENSMUST00000021864 NudcO35685 332 aaKnown RBP10.63□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Stag3O70576 1240 aa10.62□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Psme1P97371 249 aa10.62□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Gm14025A2AP89 1413 aa10.62□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Ggt6Q6PDE7 497 aa10.62□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Grin2bQ01097 1482 aa10.62□□□□□ -0.71
Ssr1-201ENSMUST00000021864 NgefQ8CHT1 710 aa10.62□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Cabp1Q9JLK7 227 aa10.61□□□□□ -0.71
Ssr1-201ENSMUST00000021864 CanxP35564 591 aaKnown RBP10.61□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Grwd1Q810D6 446 aaKnown RBP10.6□□□□□ -0.71
Ssr1-201ENSMUST00000021864 NrkQ9R0G8 1455 aa10.6□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Dnai2A2AC93 623 aa10.59□□□□□ -0.71
Ssr1-201ENSMUST00000021864 Card11Q8CIS0 1159 aa10.59□□□□□ -0.71
Ssr1-201ENSMUST00000021864 MccE9PWI3 1003 aa10.58□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Crocc2F6XLV1 1638 aa10.57□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Ofd1Q80Z25 1017 aa10.57□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Casc1Q6TDU8 730 aa10.57□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Sh3bp5Q9Z131 463 aa10.57□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Plekhh2Q8C115 1491 aa10.56□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Polr1aO35134 1717 aaKnown RBP10.56□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Fam135aQ6NS59 1506 aa10.56□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Ccnb3Q810T2 1396 aa10.56□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Pde3bQ61409 1100 aa10.55□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Plcb2A3KGF7 1181 aa10.55□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Wwc2Q6NXJ0 1187 aa10.54□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Top2aQ01320 1528 aaKnown RBP10.54□□□□□ -0.72
Ssr1-201ENSMUST00000021864 HdgfP51859 237 aaKnown RBP10.54□□□□□ -0.72
Ssr1-201ENSMUST00000021864 KnstrnQ9D9Z1 312 aaKnown RBP10.54□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Gm973E9Q295 1059 aa10.53□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Sall2Q9QX96 1004 aa10.53□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Lamc3Q9R0B6 1581 aa10.53□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Arhgap31A6X8Z5 1425 aa10.52□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Nol10Q5RJG1 687 aaKnown RBP10.52□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Nup155Q99P88 1391 aaKnown RBP10.52□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Ppm1gQ61074 542 aa10.52□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Trak1Q6PD31 939 aa10.52□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Gm7298A0A0N4SVU1 1476 aa10.52□□□□□ -0.72
Ssr1-201ENSMUST00000021864 Fhad1A6PWD2 1420 aa10.52□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Arhgap35Q91YM2 1499 aa10.52□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Rtf1A2AQ19 715 aaKnown RBP10.52□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Tdrd9Q14BI7 1383 aa10.51□□□□□ -0.73
Ssr1-201ENSMUST00000021864 PtprkP35822 1457 aa10.51□□□□□ -0.73
Ssr1-201ENSMUST00000021864 HnrnpuQ8VEK3 800 aaKnown RBP10.51□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Hsp90b1P08113 802 aaKnown RBP10.51□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Camsap1A2AHC3 1581 aa10.51□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Cyb5rlB1AS42 316 aa10.51□□□□□ -0.73
Ssr1-201ENSMUST00000021864 1700019A02RikA0A087WPV9 146 aa10.5□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Mbd3Q9Z2D8 285 aaKnown RBP10.5□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Spag9Q58A65 1321 aaKnown RBP10.5□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Igf1rQ60751 1373 aa10.5□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Stk26Q99JT2 416 aa10.5□□□□□ -0.73
Ssr1-201ENSMUST00000021864 PtmsQ9D0J8 101 aaKnown RBP10.5□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Pkd2O35245 966 aa10.49□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Gm38655A0A286YDK6 273 aa10.49□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Anapc15P60007 132 aa10.48□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Neurod2Q62414 383 aa10.48□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Tpm3-rs7D3Z2H9 248 aa10.47□□□□□ -0.73
Ssr1-201ENSMUST00000021864 EprsQ8CGC7 1512 aaKnown RBP10.47□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Rassf8Q8CJ96 419 aa10.47□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Sart3Q9JLI8 962 aaKnown RBP10.47□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Calcoco2A2A6M5 331 aa10.47□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Pip4k2bQ80XI4 416 aa10.46□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Bcl11bQ99PV8 884 aa10.46□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Apbb1Q9QXJ1 710 aa10.46□□□□□ -0.73
Ssr1-201ENSMUST00000021864 Neo1P97798 1493 aa10.46□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Ccdc141E9Q8Q6 1531 aa10.46□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Ifit1bl1D3Z6F0 470 aa10.44□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Thoc2B1AZI6 1594 aaKnown RBP10.44□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Prdm16A2A935 1275 aa10.44□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Grin2aP35436 1464 aa10.44□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Mphosph9A6H5Y1 991 aa10.43□□□□□ -0.74
Ssr1-201ENSMUST00000021864 TchhA0A0B4J1F9 1599 aa10.43□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Gm156Q58A37 223 aa10.43□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Mroh2bQ7M6Y6 1581 aa10.43□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Gtf2e1Q9D0D5 440 aa10.43□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Arhgap5P97393 1501 aa10.42□□□□□ -0.74
Ssr1-201ENSMUST00000021864 UacaQ8CGB3 1411 aa10.42□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Sox12Q04890 314 aa10.42□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Q8BT18 775 aa10.42□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Map3k1P53349 1493 aa10.42□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Mak16Q8BGS0 296 aaKnown RBP10.41□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Fam163aQ8CAA5 168 aa10.41□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Rwdd1Q9CQK7 243 aa10.4□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Cnga1P29974 684 aa10.4□□□□□ -0.74
Ssr1-201ENSMUST00000021864 Tmf1B9EKI3 1091 aa10.4□□□□□ -0.75
Ssr1-201ENSMUST00000021864 Utp14aQ640M1 767 aaKnown RBP10.39□□□□□ -0.75
Ssr1-201ENSMUST00000021864 AqrQ8CFQ3 1481 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 175 ms