RNA–Protein interactions for RNA: ENSMUST00000012627.4

Rpa3-201, Transcript of Replication protein A 14 kDa subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rpa3, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3-201ENSMUST00000012627 Inpp5dQ9ES52 1191 aa15.36■□□□□ 0.05
Rpa3-201ENSMUST00000012627 ChgaP26339 463 aaKnown RBP15.35■□□□□ 0.05
Rpa3-201ENSMUST00000012627 Onecut3Q8K557 490 aa15.34■□□□□ 0.05
Rpa3-201ENSMUST00000012627 Ccdc180J3QNE4 1664 aa15.32■□□□□ 0.04
Rpa3-201ENSMUST00000012627 Gm13695A2AK44 830 aa15.31■□□□□ 0.04
Rpa3-201ENSMUST00000012627 Krtap4-1Q3UUY3 169 aa15.31■□□□□ 0.04
Rpa3-201ENSMUST00000012627 Ddx11Q6AXC6 880 aa15.31■□□□□ 0.04
Rpa3-201ENSMUST00000012627 Pelp1Q9DBD5 1123 aaKnown RBP15.31■□□□□ 0.04
Rpa3-201ENSMUST00000012627 Hoxa2P31245 372 aa15.29■□□□□ 0.04
Rpa3-201ENSMUST00000012627 Eya1P97767 591 aa15.27■□□□□ 0.04
Rpa3-201ENSMUST00000012627 Kdm5dQ62240 1548 aa15.25■□□□□ 0.03
Rpa3-201ENSMUST00000012627 Taok2Q6ZQ29 1240 aa15.24■□□□□ 0.03
Rpa3-201ENSMUST00000012627 Lce6aD3YV94 81 aa15.23■□□□□ 0.03
Rpa3-201ENSMUST00000012627 Ffar3Q3UFD7 319 aa15.22■□□□□ 0.03
Rpa3-201ENSMUST00000012627 NacadQ5SWP3 1504 aa15.22■□□□□ 0.03
Rpa3-201ENSMUST00000012627 Ric3Q8BPM6 367 aa15.21■□□□□ 0.03
Rpa3-201ENSMUST00000012627 Rb1cc1Q9ESK9 1588 aa15.2■□□□□ 0.02
Rpa3-201ENSMUST00000012627 Slc12a5Q91V14 1138 aa15.2■□□□□ 0.02
Rpa3-201ENSMUST00000012627 ElnP54320 860 aa15.19■□□□□ 0.02
Rpa3-201ENSMUST00000012627 Crim1Q9JLL0 1037 aa15.19■□□□□ 0.02
Rpa3-201ENSMUST00000012627 LipiF6YQT7 476 aa15.18■□□□□ 0.02
Rpa3-201ENSMUST00000012627 RragcQ99K70 398 aa15.15■□□□□ 0.02
Rpa3-201ENSMUST00000012627 Lhx6Q9R1R0 363 aa15.14■□□□□ 0.01
Rpa3-201ENSMUST00000012627 Masp1P98064 704 aa15.12■□□□□ 0.01
Rpa3-201ENSMUST00000012627 JmyQ9QXM1 983 aa15.12■□□□□ 0.01
Rpa3-201ENSMUST00000012627 Thap8E9Q695 213 aa15.1■□□□□ 0.01
Rpa3-201ENSMUST00000012627 Spryd3E9Q9B3 442 aa15.1■□□□□ 0.01
Rpa3-201ENSMUST00000012627 Slc7a3P70423 618 aa15.1■□□□□ 0.01
Rpa3-201ENSMUST00000012627 Smpd1Q04519 627 aa15.09■□□□□ 0.01
Rpa3-201ENSMUST00000012627 Fmr1nbQ80ZA7 238 aa15.09■□□□□ 0.01
Rpa3-201ENSMUST00000012627 Sall2Q9QX96 1004 aa15.09■□□□□ 0.01
Rpa3-201ENSMUST00000012627 OscarQ8VBT3 265 aa15.08■□□□□ 0
Rpa3-201ENSMUST00000012627 Pdcd7Q9WTY1 482 aa15.08■□□□□ 0
Rpa3-201ENSMUST00000012627 Baz1aO88379 1555 aa15.07■□□□□ 0
Rpa3-201ENSMUST00000012627 Pde8bE9Q4S1 865 aa15.07■□□□□ 0
Rpa3-201ENSMUST00000012627 Prrt3Q6PE13 971 aa15.07■□□□□ 0
Rpa3-201ENSMUST00000012627 Arid3aQ62431 601 aa15.04■□□□□ -0
Rpa3-201ENSMUST00000012627 Lrfn2Q80TG9 788 aa15.04■□□□□ -0
Rpa3-201ENSMUST00000012627 Klra4Q60651 263 aa15.02■□□□□ -0
Rpa3-201ENSMUST00000012627 Esf1Q3V1V3 845 aaKnown RBP15.01□□□□□ -0.01
Rpa3-201ENSMUST00000012627 Setdb2Q8C267 713 aa14.99□□□□□ -0.01
Rpa3-201ENSMUST00000012627 Irx6Q9ER75 438 aa14.99□□□□□ -0.01
Rpa3-201ENSMUST00000012627 VaspP70460 375 aaKnown RBP14.97□□□□□ -0.01
Rpa3-201ENSMUST00000012627 Plekhg3Q4VAC9 1341 aa14.96□□□□□ -0.01
Rpa3-201ENSMUST00000012627 Pbx2O35984 430 aa14.96□□□□□ -0.01
Rpa3-201ENSMUST00000012627 Crybg2B7ZCC2 1516 aa14.96□□□□□ -0.02
Rpa3-201ENSMUST00000012627 Pcdh10E9PXQ7 1057 aa14.95□□□□□ -0.02
Rpa3-201ENSMUST00000012627 Dnajc5gQ8C632 165 aa14.95□□□□□ -0.02
Rpa3-201ENSMUST00000012627 Znf354bQ9QXT9 601 aa14.94□□□□□ -0.02
Rpa3-201ENSMUST00000012627 Ciz1Q8VEH2 845 aa14.93□□□□□ -0.02
Rpa3-201ENSMUST00000012627 E2f4Q8R0K9 410 aa14.89□□□□□ -0.03
Rpa3-201ENSMUST00000012627 Sycp2Q9CUU3 1500 aa14.88□□□□□ -0.03
Rpa3-201ENSMUST00000012627 Mllt6B1AR10 1109 aa14.86□□□□□ -0.03
Rpa3-201ENSMUST00000012627 Slain2Q8CI08 581 aa14.86□□□□□ -0.03
Rpa3-201ENSMUST00000012627 Unc5aQ8K1S4 898 aa14.86□□□□□ -0.03
Rpa3-201ENSMUST00000012627 Zcchc6Q5BLK4 1491 aaKnown RBP14.85□□□□□ -0.03
Rpa3-201ENSMUST00000012627 Foxd4Q60688 444 aa14.85□□□□□ -0.03
Rpa3-201ENSMUST00000012627 Bcl11bQ99PV8 884 aa14.85□□□□□ -0.03
Rpa3-201ENSMUST00000012627 Slc24a3Q99PD7 645 aa14.83□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Tpcn2Q8BWC0 731 aa14.82□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Erbb3Q61526 1339 aa14.82□□□□□ -0.04
Rpa3-201ENSMUST00000012627 XpcP51612 930 aa14.81□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Myt1lP97500 1187 aa14.81□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Tmc3Q7TQ69 1130 aa14.81□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Rem2Q8VEL9 341 aa14.81□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Gm11939A2A592 99 aa14.8□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Ubap1lG3UW59 384 aa14.79□□□□□ -0.04
Rpa3-201ENSMUST00000012627 GnpatP98192 678 aa14.78□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Nudt12Q9DCN1 462 aa14.78□□□□□ -0.04
Rpa3-201ENSMUST00000012627 Rnf166Q3U9F6 237 aa14.76□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Prr7Q3V0I2 269 aa14.76□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Farp1F8VPU2 1048 aa14.75□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Apba2P98084 750 aa14.74□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Psen1P49769 467 aa14.73□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Ms4a4cQ9D3F6 226 aa14.72□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Smarca2Q6DIC0 1577 aa14.72□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Irf6P97431 467 aa14.71□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Gabbr2Q80T41 940 aa14.71□□□□□ -0.05
Rpa3-201ENSMUST00000012627 Ints3Q7TPD0 1041 aaKnown RBP14.67□□□□□ -0.06
Rpa3-201ENSMUST00000012627 Fbxo31Q3TQF0 507 aa14.65□□□□□ -0.06
Rpa3-201ENSMUST00000012627 Rasgrp4Q8BTM9 673 aa14.65□□□□□ -0.06
Rpa3-201ENSMUST00000012627 LtbrP50284 415 aa14.64□□□□□ -0.07
Rpa3-201ENSMUST00000012627 Ak7Q9D2H2 614 aa14.64□□□□□ -0.07
Rpa3-201ENSMUST00000012627 Emid1Q91VF5 444 aa14.61□□□□□ -0.07
Rpa3-201ENSMUST00000012627 RydenQ8CAK3 290 aaKnown RBP14.6□□□□□ -0.07
Rpa3-201ENSMUST00000012627 Myt1Q8CFC2 1127 aa14.6□□□□□ -0.07
Rpa3-201ENSMUST00000012627 Mllt3A2AM29 569 aa14.59□□□□□ -0.07
Rpa3-201ENSMUST00000012627 Hs1bp3Q3TC93 395 aa14.59□□□□□ -0.07
Rpa3-201ENSMUST00000012627 Gpatch8A2A6A1 1505 aa14.57□□□□□ -0.08
Rpa3-201ENSMUST00000012627 Tsr1Q5SWD9 803 aa14.57□□□□□ -0.08
Rpa3-201ENSMUST00000012627 Scaf8Q6DID3 1268 aa14.57□□□□□ -0.08
Rpa3-201ENSMUST00000012627 Ano8Q6PB70 1060 aa14.57□□□□□ -0.08
Rpa3-201ENSMUST00000012627 Ttll13A4Q9F6 804 aa14.56□□□□□ -0.08
Rpa3-201ENSMUST00000012627 MetrnQ8C1Q4 291 aa14.55□□□□□ -0.08
Rpa3-201ENSMUST00000012627 BicraF8VPZ9 1578 aa14.54□□□□□ -0.08
Rpa3-201ENSMUST00000012627 Aldh16a1Q571I9 802 aa14.53□□□□□ -0.08
Rpa3-201ENSMUST00000012627 Zbtb38Q3LR78 1197 aa14.52□□□□□ -0.09
Rpa3-201ENSMUST00000012627 Kctd12Q6WVG3 327 aa14.52□□□□□ -0.09
Rpa3-201ENSMUST00000012627 Adra2bP30545 450 aa14.51□□□□□ -0.09
Rpa3-201ENSMUST00000012627 Alkbh8Q80Y20 664 aa14.49□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 6.7 ms