RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 UBC1P21734 215 aaKnown RBP1.21□□□□□ -2.22
snR55snR55 NUP133P36161 1157 aa1.21□□□□□ -2.22
snR55snR55 NAT2P37293 288 aa1.21□□□□□ -2.22
snR55snR55 KTR3P38130 404 aaPredicted RBP1.21□□□□□ -2.22
snR55snR55 YHR210CP38893 341 aa1.21□□□□□ -2.22
snR55snR55 ELP2P42935 788 aa1.21□□□□□ -2.22
snR55snR55 BSC5P53755 489 aa1.21□□□□□ -2.22
snR55snR55 RPC11Q04307 110 aaPredicted RBP1.21□□□□□ -2.22
snR55snR55 SKG3Q06315 1026 aa1.21□□□□□ -2.22
snR55snR55 IES4Q08561 116 aa1.21□□□□□ -2.22
snR55snR55 RPB2P08518 1224 aaKnown RBP1.2□□□□□ -2.22
snR55snR55 KGD1P20967 1014 aaKnown RBP1.2□□□□□ -2.22
snR55snR55 MSG5P38590 489 aa1.2□□□□□ -2.22
snR55snR55 SLZ1P40167 298 aa1.2□□□□□ -2.22
snR55snR55 MUB1Q03162 620 aa1.2□□□□□ -2.22
snR55snR55 DPB4Q04603 196 aaKnown RBP1.2□□□□□ -2.22
snR55snR55 NUS1Q12063 375 aa1.2□□□□□ -2.22
snR55snR55 YLR108CQ12259 485 aa1.2□□□□□ -2.22
snR55snR55 YPS3Q12303 508 aa1.2□□□□□ -2.22
snR55snR55 RPS8AP0CX39 200 aaKnown RBP1.19□□□□□ -2.22
snR55snR55 RPS8BP0CX40 200 aaKnown RBP1.19□□□□□ -2.22
snR55snR55 PFK2P16862 959 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
snR55snR55 EXO70P19658 623 aa1.19□□□□□ -2.22
snR55snR55 DAL2P25335 343 aa1.19□□□□□ -2.22
snR55snR55 ADH7P25377 361 aa1.19□□□□□ -2.22
snR55snR55 YBL055CP34220 418 aaPredicted RBP1.19□□□□□ -2.22
snR55snR55 YHL041WP38730 149 aa1.19□□□□□ -2.22
snR55snR55 TAN1P53072 289 aaPredicted RBP1.19□□□□□ -2.22
snR55snR55 PEX8P53248 589 aa1.19□□□□□ -2.22
snR55snR55 GOR1P53839 350 aa1.19□□□□□ -2.22
snR55snR55 PSR1Q07800 427 aa1.19□□□□□ -2.22
snR55snR55 RKM5Q12367 367 aa1.19□□□□□ -2.22
snR55snR55 PEP4P07267 405 aaKnown RBP1.18□□□□□ -2.22
snR55snR55 NUC1P08466 329 aa1.18□□□□□ -2.22
snR55snR55 PRB1P09232 635 aa1.18□□□□□ -2.22
snR55snR55 PUP3P25451 205 aaKnown RBP1.18□□□□□ -2.22
snR55snR55 PTP2P29461 750 aa1.18□□□□□ -2.22
snR55snR55 ALY1P36117 915 aa1.18□□□□□ -2.22
snR55snR55 GRX7P38068 203 aa1.18□□□□□ -2.22
snR55snR55 VID24P38263 362 aa1.18□□□□□ -2.22
snR55snR55 PRM5P40476 318 aa1.18□□□□□ -2.22
snR55snR55 WWM1P43582 211 aaKnown RBP1.18□□□□□ -2.22
snR55snR55 BRO1P48582 844 aa1.18□□□□□ -2.22
snR55snR55 YGR126WP53274 230 aa1.18□□□□□ -2.22
snR55snR55 IBD2P53892 351 aa1.18□□□□□ -2.22
snR55snR55 EFM6P53970 246 aa1.18□□□□□ -2.22
snR55snR55 MRPL13Q02204 264 aa1.18□□□□□ -2.22
snR55snR55 YDL057WQ07379 328 aa1.18□□□□□ -2.22
snR55snR55 CFT2Q12102 859 aaPredicted RBP1.18□□□□□ -2.22
snR55snR55 NDI1P32340 513 aa1.17□□□□□ -2.22
snR55snR55 MRP20P32387 263 aa1.17□□□□□ -2.22
snR55snR55 GLC7P32598 312 aaKnown RBP1.17□□□□□ -2.22
snR55snR55 RPL32P38061 130 aaKnown RBP1.17□□□□□ -2.22
snR55snR55 MIX23P38162 196 aa1.17□□□□□ -2.22
snR55snR55 RIC1P40395 1056 aa1.17□□□□□ -2.22
snR55snR55 APT1P49435 187 aaKnown RBP1.17□□□□□ -2.22
snR55snR55 GPI1P53306 609 aa1.17□□□□□ -2.22
snR55snR55 PEX25Q02969 394 aa1.17□□□□□ -2.22
snR55snR55 YKU80Q04437 629 aa1.17□□□□□ -2.22
snR55snR55 RBS1Q05672 457 aaKnown RBP1.17□□□□□ -2.22
snR55snR55 KEL3Q08979 651 aaPredicted RBP1.17□□□□□ -2.22
snR55snR55 TMA7Q3E764 64 aaKnown RBP1.17□□□□□ -2.22
snR55snR55 YLR302CO13544 120 aa1.16□□□□□ -2.22
snR55snR55 BOS1P25385 244 aa1.16□□□□□ -2.22
snR55snR55 NUP2P32499 720 aa1.16□□□□□ -2.22
snR55snR55 KKQ8P36004 724 aa1.16□□□□□ -2.22
snR55snR55 CHS6P40955 746 aa1.16□□□□□ -2.22
snR55snR55 OST1P41543 476 aaKnown RBP1.16□□□□□ -2.22
snR55snR55 YJR085CP47131 105 aaKnown RBP1.16□□□□□ -2.22
snR55snR55 LYS4P49367 693 aaPredicted RBP1.16□□□□□ -2.22
snR55snR55 PAP2P53632 584 aaKnown RBP1.16□□□□□ -2.22
snR55snR55 RCO1Q04779 684 aa1.16□□□□□ -2.22
snR55snR55 GLK1P17709 500 aaKnown RBP1.15□□□□□ -2.23
snR55snR55 MSM1P22438 575 aa1.15□□□□□ -2.23
snR55snR55 VMA16P23968 213 aa1.15□□□□□ -2.23
snR55snR55 IMG1P25626 169 aa1.15□□□□□ -2.23
snR55snR55 SEF1P34228 1148 aa1.15□□□□□ -2.23
snR55snR55 FRE2P36033 711 aa1.15□□□□□ -2.23
snR55snR55 STB6P36085 766 aa1.15□□□□□ -2.23
snR55snR55 YHR131CP38835 850 aa1.15□□□□□ -2.23
snR55snR55 GAB1P41733 394 aa1.15□□□□□ -2.23
snR55snR55 PTR3P43606 678 aa1.15□□□□□ -2.23
snR55snR55 BNA1P47096 177 aa1.15□□□□□ -2.23
snR55snR55 YPR091CQ06833 770 aa1.15□□□□□ -2.23
snR55snR55 PRM7Q12459 698 aa1.15□□□□□ -2.23
snR55snR55 HSH49Q99181 213 aaPredicted RBP1.15□□□□□ -2.23
snR55snR55 TEF4P36008 412 aaKnown RBP1.14□□□□□ -2.23
snR55snR55 MRPL10P36520 322 aa1.14□□□□□ -2.23
snR55snR55 DUG2P38149 878 aa1.14□□□□□ -2.23
snR55snR55 SEO1P39709 593 aa1.14□□□□□ -2.23
snR55snR55 NCA3P46955 337 aa1.14□□□□□ -2.23
snR55snR55 POP6P53218 158 aa1.14□□□□□ -2.23
snR55snR55 HER2Q03557 464 aa1.14□□□□□ -2.23
snR55snR55 RIX7Q07844 837 aaKnown RBP1.14□□□□□ -2.23
snR55snR55 CUE5Q08412 411 aaKnown RBP1.14□□□□□ -2.23
snR55snR55 YPL272CQ08984 517 aa1.14□□□□□ -2.23
snR55snR55 TRM8Q12009 286 aa1.14□□□□□ -2.23
snR55snR55 NFT1P0CE68 1218 aa1.13□□□□□ -2.23
snR55snR55 SSB1P11484 613 aaKnown RBP1.13□□□□□ -2.23
snR55snR55 PHO81P17442 1178 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms