RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeast

Gene ATG29, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG29	YPL166W	MDM31	P38880	579 aa		4.15	□□□□□ -1.75
ATG29	YPL166W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
ATG29	YPL166W	DRN1	P53255	507 aa	Known RBP	4.15	□□□□□ -1.75
ATG29	YPL166W	FIN1	Q03898	291 aa		4.15	□□□□□ -1.75
ATG29	YPL166W	RPC11	Q04307	110 aa	Predicted RBP	4.15	□□□□□ -1.75
ATG29	YPL166W	PPT2	Q12036	173 aa		4.15	□□□□□ -1.75
ATG29	YPL166W	RPL15A	P05748	204 aa	Known RBP	4.14	□□□□□ -1.75
ATG29	YPL166W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
ATG29	YPL166W	YBR225W	P38321	900 aa		4.14	□□□□□ -1.75
ATG29	YPL166W	RMD8	P43620	662 aa		4.14	□□□□□ -1.75
ATG29	YPL166W	RTT101	P47050	842 aa		4.14	□□□□□ -1.75
ATG29	YPL166W	SLD5	Q03406	294 aa		4.14	□□□□□ -1.75
ATG29	YPL166W	IVY1	Q04934	453 aa		4.14	□□□□□ -1.75
ATG29	YPL166W	IMH1	Q06704	911 aa	Known RBP	4.14	□□□□□ -1.75
ATG29	YPL166W	SYO1	Q07395	620 aa		4.14	□□□□□ -1.75
ATG29	YPL166W	YBR298C-A	Q8TGK4	73 aa		4.14	□□□□□ -1.75
ATG29	YPL166W	AMD1	P15274	810 aa	Known RBP	4.13	□□□□□ -1.75
ATG29	YPL166W	YCR007C	P25354	239 aa		4.13	□□□□□ -1.75
ATG29	YPL166W	ELO2	P25358	347 aa		4.13	□□□□□ -1.75
ATG29	YPL166W	YME1	P32795	747 aa		4.13	□□□□□ -1.75
ATG29	YPL166W	BNA4	P38169	460 aa		4.13	□□□□□ -1.75
ATG29	YPL166W	TIF4631	P39935	952 aa	Known RBP	4.13	□□□□□ -1.75
ATG29	YPL166W	AIM22	P47051	409 aa		4.13	□□□□□ -1.75
ATG29	YPL166W	RPT6	Q01939	405 aa	Known RBP	4.13	□□□□□ -1.75
ATG29	YPL166W	RLI1	Q03195	608 aa	Known RBP	4.13	□□□□□ -1.75
ATG29	YPL166W	YDL009C	Q12210	107 aa		4.13	□□□□□ -1.75
ATG29	YPL166W	SET6	Q12529	373 aa		4.13	□□□□□ -1.75
ATG29	YPL166W	CYB2	P00175	591 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	SUC2	P00724	532 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	MET8	P15807	274 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	OCA4	P25366	362 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	PRD1	P25375	712 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	SPC110	P32380	944 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	FRE1	P32791	686 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	WBP1	P33767	430 aa	Known RBP	4.12	□□□□□ -1.75
ATG29	YPL166W	DUG2	P38149	878 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	SRO77	P38163	1010 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	TCM62	P38228	572 aa	Known RBP	4.12	□□□□□ -1.75
ATG29	YPL166W	RPH1	P39956	796 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	DOT5	P40553	215 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	ARE2	P53629	642 aa	Known RBP	4.12	□□□□□ -1.75
ATG29	YPL166W	ERP1	Q05359	219 aa	Known RBP	4.12	□□□□□ -1.75
ATG29	YPL166W	BNA5	Q05979	453 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	MRPL51	Q06090	140 aa	Predicted RBP	4.12	□□□□□ -1.75
ATG29	YPL166W	RRI2	Q12348	645 aa		4.12	□□□□□ -1.75
ATG29	YPL166W	FOB1	O13329	566 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	HSC82	P15108	705 aa	Known RBP	4.11	□□□□□ -1.75
ATG29	YPL166W	PRP2	P20095	876 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG29	YPL166W	ATS1	P31386	333 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	UTR4	P32626	227 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	LOS1	P33418	1100 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG29	YPL166W	NPR2	P39923	615 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	RPR2	P40571	144 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	YFR016C	P43597	1233 aa	Known RBP	4.11	□□□□□ -1.75
ATG29	YPL166W	PET130	P47065	347 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	ZPR1	P53303	486 aa	Known RBP	4.11	□□□□□ -1.75
ATG29	YPL166W	HEF3	P53978	1044 aa	Known RBP	4.11	□□□□□ -1.75
ATG29	YPL166W	SUB1	P54000	292 aa	Known RBP	4.11	□□□□□ -1.75
ATG29	YPL166W	MFB1	Q04922	465 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	PHO92	Q06390	306 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	LSP1	Q12230	341 aa	Known RBP	4.11	□□□□□ -1.75
ATG29	YPL166W	MED1	Q12321	566 aa		4.11	□□□□□ -1.75
ATG29	YPL166W	GDH1	P07262	454 aa	Known RBP	4.1	□□□□□ -1.75
ATG29	YPL166W	PRP16	P15938	1071 aa	Predicted RBP	4.1	□□□□□ -1.75
ATG29	YPL166W	EXO70	P19658	623 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	BUD14	P27637	709 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	MSN2	P33748	704 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	MTC4	P38335	694 aa	Known RBP	4.1	□□□□□ -1.75
ATG29	YPL166W	YJL213W	P40896	331 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	YDL186W	P48568	277 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	GPI1	P53306	609 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	IRC15	Q02733	499 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	YDR239C	Q03780	787 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	AYT1	Q12226	474 aa		4.1	□□□□□ -1.75
ATG29	YPL166W	BRR1	Q99177	341 aa	Predicted RBP	4.1	□□□□□ -1.75
ATG29	YPL166W	COR1	P07256	457 aa		4.09	□□□□□ -1.75
ATG29	YPL166W	RPL20A	P0CX23	172 aa	Known RBP	4.09	□□□□□ -1.75
ATG29	YPL166W	RPL20B	P0CX24	172 aa	Predicted RBP	4.09	□□□□□ -1.75
ATG29	YPL166W	MRE11	P32829	692 aa		4.09	□□□□□ -1.75
ATG29	YPL166W	MUM2	P38236	366 aa		4.09	□□□□□ -1.75
ATG29	YPL166W	KRE9	P39005	276 aa		4.09	□□□□□ -1.75
ATG29	YPL166W	SHO1	P40073	367 aa		4.09	□□□□□ -1.75
ATG29	YPL166W	MET28	P40573	187 aa		4.09	□□□□□ -1.75
ATG29	YPL166W	COS10	P52924	374 aa		4.09	□□□□□ -1.75
ATG29	YPL166W	IMP4	P53941	290 aa	Known RBP	4.09	□□□□□ -1.75
ATG29	YPL166W	VPS74	Q06385	345 aa		4.09	□□□□□ -1.75
ATG29	YPL166W	MCK1	P21965	375 aa	Known RBP	4.08	□□□□□ -1.76
ATG29	YPL166W	CST26	P38226	397 aa		4.08	□□□□□ -1.76
ATG29	YPL166W	MBB1	P39534	108 aa		4.08	□□□□□ -1.76
ATG29	YPL166W	YEL057C	P39983	233 aa		4.08	□□□□□ -1.76
ATG29	YPL166W	SPO22	P40511	975 aa		4.08	□□□□□ -1.76
ATG29	YPL166W	CAF130	P53280	1122 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG29	YPL166W	TIM10	P87108	93 aa		4.08	□□□□□ -1.76
ATG29	YPL166W	RBS1	Q05672	457 aa	Known RBP	4.08	□□□□□ -1.76
ATG29	YPL166W	SEC39	Q12745	709 aa		4.08	□□□□□ -1.76
ATG29	YPL166W	RAV1	P47104	1357 aa		4.07	□□□□□ -1.76
ATG29	YPL166W	ARG3	P05150	338 aa		4.07	□□□□□ -1.76
ATG29	YPL166W	YCR022C	P25620	114 aa		4.07	□□□□□ -1.76
ATG29	YPL166W	CPR3	P25719	182 aa		4.07	□□□□□ -1.76
ATG29	YPL166W	AGA1	P32323	725 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms