RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	DUG2	P38149	878 aa		4.21	□□□□□ -1.74
RPN8	YOR261C	TCM62	P38228	572 aa	Known RBP	4.21	□□□□□ -1.74
RPN8	YOR261C	YBR225W	P38321	900 aa		4.21	□□□□□ -1.74
RPN8	YOR261C	NPR2	P39923	615 aa		4.21	□□□□□ -1.74
RPN8	YOR261C	ALK1	P43633	760 aa	Known RBP	4.21	□□□□□ -1.74
RPN8	YOR261C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RPN8	YOR261C	RTT101	P47050	842 aa		4.21	□□□□□ -1.74
RPN8	YOR261C	AIM22	P47051	409 aa		4.21	□□□□□ -1.74
RPN8	YOR261C	COS10	P52924	374 aa		4.21	□□□□□ -1.74
RPN8	YOR261C	YGR066C	P53242	292 aa		4.21	□□□□□ -1.74
RPN8	YOR261C	BUD21	Q08492	214 aa	Predicted RBP	4.21	□□□□□ -1.74
RPN8	YOR261C	AVL9	Q12500	764 aa		4.21	□□□□□ -1.74
RPN8	YOR261C	GAL80	P04387	435 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	PRP16	P15938	1071 aa	Predicted RBP	4.2	□□□□□ -1.74
RPN8	YOR261C	PRP2	P20095	876 aa	Predicted RBP	4.2	□□□□□ -1.74
RPN8	YOR261C	PRD1	P25375	712 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	SPC110	P32380	944 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	UTR4	P32626	227 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	WBP1	P33767	430 aa	Known RBP	4.2	□□□□□ -1.74
RPN8	YOR261C	REG2	P38232	338 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	MDM31	P38880	579 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	KRE9	P39005	276 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	RPR2	P40571	144 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	MET28	P40573	187 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	RLI1	Q03195	608 aa	Known RBP	4.2	□□□□□ -1.74
RPN8	YOR261C	FIN1	Q03898	291 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	YDL009C	Q12210	107 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	RRI2	Q12348	645 aa		4.2	□□□□□ -1.74
RPN8	YOR261C	GCN4	P03069	281 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
RPN8	YOR261C	YCR007C	P25354	239 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	YCR022C	P25620	114 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	PTR2	P32901	601 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	MUM2	P38236	366 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	TIF4631	P39935	952 aa	Known RBP	4.19	□□□□□ -1.74
RPN8	YOR261C	RPH1	P39956	796 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	YFR016C	P43597	1233 aa	Known RBP	4.19	□□□□□ -1.74
RPN8	YOR261C	THP1	Q08231	455 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	PPT2	Q12036	173 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	MED1	Q12321	566 aa		4.19	□□□□□ -1.74
RPN8	YOR261C	MTF1	P14908	341 aa	Known RBP	4.18	□□□□□ -1.74
RPN8	YOR261C	FRE1	P32791	686 aa		4.18	□□□□□ -1.74
RPN8	YOR261C	MSN2	P33748	704 aa		4.18	□□□□□ -1.74
RPN8	YOR261C	MTC4	P38335	694 aa	Known RBP	4.18	□□□□□ -1.74
RPN8	YOR261C	YDL186W	P48568	277 aa		4.18	□□□□□ -1.74
RPN8	YOR261C	HEF3	P53978	1044 aa	Known RBP	4.18	□□□□□ -1.74
RPN8	YOR261C	AYT1	Q12226	474 aa		4.18	□□□□□ -1.74
RPN8	YOR261C	SET6	Q12529	373 aa		4.18	□□□□□ -1.74
RPN8	YOR261C	MCK1	P21965	375 aa	Known RBP	4.17	□□□□□ -1.74
RPN8	YOR261C	BUD14	P27637	709 aa		4.17	□□□□□ -1.74
RPN8	YOR261C	MRE11	P32829	692 aa		4.17	□□□□□ -1.74
RPN8	YOR261C	SRO77	P38163	1010 aa		4.17	□□□□□ -1.74
RPN8	YOR261C	BNA4	P38169	460 aa		4.17	□□□□□ -1.74
RPN8	YOR261C	YEL057C	P39983	233 aa		4.17	□□□□□ -1.74
RPN8	YOR261C	IMP4	P53941	290 aa	Known RBP	4.17	□□□□□ -1.74
RPN8	YOR261C	IVY1	Q04934	453 aa		4.17	□□□□□ -1.74
RPN8	YOR261C	MRPL51	Q06090	140 aa	Predicted RBP	4.17	□□□□□ -1.74
RPN8	YOR261C	PHO92	Q06390	306 aa		4.17	□□□□□ -1.74
RPN8	YOR261C	CAR1	P00812	333 aa	Known RBP	4.16	□□□□□ -1.74
RPN8	YOR261C	GDH1	P07262	454 aa	Known RBP	4.16	□□□□□ -1.74
RPN8	YOR261C	PAP1	P29468	568 aa	Known RBP	4.16	□□□□□ -1.74
RPN8	YOR261C	MBB1	P39534	108 aa		4.16	□□□□□ -1.74
RPN8	YOR261C	YJL213W	P40896	331 aa		4.16	□□□□□ -1.74
RPN8	YOR261C	RBG2	P53295	368 aa	Known RBP	4.16	□□□□□ -1.74
RPN8	YOR261C	ZPR1	P53303	486 aa	Known RBP	4.16	□□□□□ -1.74
RPN8	YOR261C	MFB1	Q04922	465 aa		4.16	□□□□□ -1.74
RPN8	YOR261C	SCW10	Q04951	389 aa		4.16	□□□□□ -1.74
RPN8	YOR261C	FOB1	O13329	566 aa		4.15	□□□□□ -1.75
RPN8	YOR261C	YME1	P32795	747 aa		4.15	□□□□□ -1.75
RPN8	YOR261C	SPO22	P40511	975 aa		4.15	□□□□□ -1.75
RPN8	YOR261C	PET130	P47065	347 aa		4.15	□□□□□ -1.75
RPN8	YOR261C	LSP1	Q12230	341 aa	Known RBP	4.15	□□□□□ -1.75
RPN8	YOR261C	COR1	P07256	457 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	RPL20A	P0CX23	172 aa	Known RBP	4.14	□□□□□ -1.75
RPN8	YOR261C	RPL20B	P0CX24	172 aa	Predicted RBP	4.14	□□□□□ -1.75
RPN8	YOR261C	HSC82	P15108	705 aa	Known RBP	4.14	□□□□□ -1.75
RPN8	YOR261C	GLK1	P17709	500 aa	Known RBP	4.14	□□□□□ -1.75
RPN8	YOR261C	OCA4	P25366	362 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	AGA1	P32323	725 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	YHR218W	P38899	603 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	HAT2	P39984	401 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	GPI1	P53306	609 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	SLG1	P54867	378 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	IRC15	Q02733	499 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	RBS1	Q05672	457 aa	Known RBP	4.14	□□□□□ -1.75
RPN8	YOR261C	VPS74	Q06385	345 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	KEL3	Q08979	651 aa	Predicted RBP	4.14	□□□□□ -1.75
RPN8	YOR261C	CFT2	Q12102	859 aa	Predicted RBP	4.14	□□□□□ -1.75
RPN8	YOR261C	SEC39	Q12745	709 aa		4.14	□□□□□ -1.75
RPN8	YOR261C	HEM2	P05373	342 aa		4.13	□□□□□ -1.75
RPN8	YOR261C	PMU1	P36069	295 aa		4.13	□□□□□ -1.75
RPN8	YOR261C	KEL1	P38853	1164 aa	Known RBP	4.13	□□□□□ -1.75
RPN8	YOR261C	SHO1	P40073	367 aa		4.13	□□□□□ -1.75
RPN8	YOR261C	DOT5	P40553	215 aa		4.13	□□□□□ -1.75
RPN8	YOR261C	ROK1	P45818	564 aa	Predicted RBP	4.13	□□□□□ -1.75
RPN8	YOR261C	TIM10	P87108	93 aa		4.13	□□□□□ -1.75
RPN8	YOR261C	YDR239C	Q03780	787 aa		4.13	□□□□□ -1.75
RPN8	YOR261C	YDL007C-A	Q2V2Q0	85 aa		4.13	□□□□□ -1.75
RPN8	YOR261C	CYB2	P00175	591 aa		4.12	□□□□□ -1.75
RPN8	YOR261C	ARG3	P05150	338 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms