RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	SSL1	Q04673	461 aa	Predicted RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	CUE5	Q08412	411 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	NUS1	Q12063	375 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	MRH1	Q12117	320 aa	Predicted RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	HSH49	Q99181	213 aa	Predicted RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	RAD1	P06777	1100 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	ILS1	P09436	1072 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	ATP12	P22135	325 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	MEF1	P25039	761 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	HRR25	P29295	494 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	NTH1	P32356	751 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	AAR2	P32357	355 aa	Predicted RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	MEI5	P32489	222 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	PTH2	P34222	208 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	TAF14	P35189	244 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	THI80	P35202	319 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	UBP6	P43593	499 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	YFR020W	P43600	232 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	GPG1	P53130	126 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	TRM12	Q04235	462 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	RRP45	Q05636	305 aa	Known RBP	4.58	□□□□□ -1.68
ATM1	YMR301C	GRS2	Q06817	618 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	YLR030W	Q07967	263 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	GLO4	Q12320	285 aa		4.58	□□□□□ -1.68
ATM1	YMR301C	STE2	D6VTK4	431 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	PRP16	P15938	1071 aa	Predicted RBP	4.57	□□□□□ -1.68
ATM1	YMR301C	MF(ALPHA)2	P32435	120 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	HBS1	P32769	611 aa	Known RBP	4.57	□□□□□ -1.68
ATM1	YMR301C	MGM101	P32787	269 aa	Known RBP	4.57	□□□□□ -1.68
ATM1	YMR301C	NFU1	P32860	256 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	CDC123	Q05791	360 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	SYT1	Q06836	1226 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	PST1	Q12355	444 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	YLR111W	Q12528	110 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	MDM35	O60200	86 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	YAR066W	P0CX18	203 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	YHR214W	P0CX19	203 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	PTP1	P25044	335 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	GCG1	P32656	232 aa	Known RBP	4.57	□□□□□ -1.68
ATM1	YMR301C	HSE1	P38753	452 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	YHR045W	P38775	560 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	MGS1	P40151	587 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	NDC80	P40460	691 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	PET130	P47065	347 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	CCT8	P47079	568 aa	Known RBP	4.57	□□□□□ -1.68
ATM1	YMR301C	GCV1	P48015	400 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	ERG26	P53199	349 aa	Known RBP	4.57	□□□□□ -1.68
ATM1	YMR301C	FHN1	P53279	174 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	RSM10	Q03201	203 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	VTI1	Q04338	217 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	DIN7	Q12086	430 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	ICT1	Q12385	394 aa		4.57	□□□□□ -1.68
ATM1	YMR301C	RPB2	P08518	1224 aa	Known RBP	4.56	□□□□□ -1.68
ATM1	YMR301C	TOP3	P13099	656 aa		4.56	□□□□□ -1.68
ATM1	YMR301C	SPO16	P17122	198 aa		4.56	□□□□□ -1.68
ATM1	YMR301C	FUR1	P18562	216 aa	Known RBP	4.56	□□□□□ -1.68
ATM1	YMR301C	YPT52	P36018	234 aa	Known RBP	4.56	□□□□□ -1.68
ATM1	YMR301C	SOL2	P37262	315 aa		4.56	□□□□□ -1.68
ATM1	YMR301C	GPP1	P41277	250 aa	Known RBP	4.56	□□□□□ -1.68
ATM1	YMR301C	COS12	P53053	380 aa		4.56	□□□□□ -1.68
ATM1	YMR301C	SPP2	Q02521	185 aa		4.56	□□□□□ -1.68
ATM1	YMR301C	YPL066W	Q12194	479 aa		4.56	□□□□□ -1.68
ATM1	YMR301C	TY1A-DR3	Q12441	440 aa		4.56	□□□□□ -1.68
ATM1	YMR301C	CDC21	P06785	304 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	BCY1	P07278	416 aa	Known RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	SEC53	P07283	254 aa	Known RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	AMS1	P22855	1083 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	IMG1	P25626	169 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	MVD1	P32377	396 aa	Known RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	SFC1	P33303	322 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	AMN1	P38285	549 aa	Predicted RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	YHR127W	P38833	243 aa	Known RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
ATM1	YMR301C	FAU1	P40099	211 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	SEC26	P41810	973 aa	Known RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	YNL320W	P42840	284 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	TIS11	P47977	285 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	YNR040W	P53736	256 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	RPL22B	P56628	122 aa	Known RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	MTQ2	Q03920	221 aa	Predicted RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	ADE13	Q05911	482 aa	Known RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	CRN1	Q06440	651 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	YDR056C	Q12025	205 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	HTS1	P07263	546 aa	Known RBP	4.55	□□□□□ -1.68
ATM1	YMR301C	CMP2	P14747	604 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	SIN4	P32259	974 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	EFM1	P38732	585 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	IES5	P40060	125 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
ATM1	YMR301C	SAE2	P46946	345 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	TRM9	P49957	279 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	RRN11	Q04712	507 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	YOL107W	Q12239	342 aa		4.55	□□□□□ -1.68
ATM1	YMR301C	ADE8	P04161	214 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	GAL7	P08431	366 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	PEP5	P12868	1029 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	KIN2	P13186	1147 aa	Known RBP	4.54	□□□□□ -1.68
ATM1	YMR301C	TYR1	P20049	452 aa		4.54	□□□□□ -1.68
ATM1	YMR301C	YCK2	P23292	546 aa	Known RBP	4.54	□□□□□ -1.68
ATM1	YMR301C	LDB16	P25587	256 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms