RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeast

Gene ATG16, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG16	YMR159C	HSH49	Q99181	213 aa	Predicted RBP	4.15	□□□□□ -1.75
ATG16	YMR159C	RAD52	P06778	471 aa	Known RBP	4.14	□□□□□ -1.75
ATG16	YMR159C	PRP2	P20095	876 aa	Predicted RBP	4.14	□□□□□ -1.75
ATG16	YMR159C	YCR007C	P25354	239 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	OCA4	P25366	362 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	PAP1	P29468	568 aa	Known RBP	4.14	□□□□□ -1.75
ATG16	YMR159C	MRE11	P32829	692 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	WBP1	P33767	430 aa	Known RBP	4.14	□□□□□ -1.75
ATG16	YMR159C	DUG2	P38149	878 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	MDM31	P38880	579 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	NPR2	P39923	615 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
ATG16	YMR159C	MET28	P40573	187 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	RPC11	Q04307	110 aa	Predicted RBP	4.14	□□□□□ -1.75
ATG16	YMR159C	COQ9	Q05779	260 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	TIP41	Q12199	356 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	YBR298C-A	Q8TGK4	73 aa		4.14	□□□□□ -1.75
ATG16	YMR159C	BRR1	Q99177	341 aa	Predicted RBP	4.14	□□□□□ -1.75
ATG16	YMR159C	PRO3	P32263	286 aa	Known RBP	4.13	□□□□□ -1.75
ATG16	YMR159C	NDC1	P32500	655 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	UTR4	P32626	227 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	RGT1	P32862	1170 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	LOS1	P33418	1100 aa	Predicted RBP	4.13	□□□□□ -1.75
ATG16	YMR159C	TIF4631	P39935	952 aa	Known RBP	4.13	□□□□□ -1.75
ATG16	YMR159C	RTT101	P47050	842 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	AIM22	P47051	409 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	RBG2	P53295	368 aa	Known RBP	4.13	□□□□□ -1.75
ATG16	YMR159C	SLD5	Q03406	294 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	THP1	Q08231	455 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	PPT2	Q12036	173 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	YDL009C	Q12210	107 aa		4.13	□□□□□ -1.75
ATG16	YMR159C	CAR1	P00812	333 aa	Known RBP	4.12	□□□□□ -1.75
ATG16	YMR159C	GAL80	P04387	435 aa		4.12	□□□□□ -1.75
ATG16	YMR159C	RPL15A	P05748	204 aa	Known RBP	4.12	□□□□□ -1.75
ATG16	YMR159C	MTF1	P14908	341 aa	Known RBP	4.12	□□□□□ -1.75
ATG16	YMR159C	BNA4	P38169	460 aa		4.12	□□□□□ -1.75
ATG16	YMR159C	TCM62	P38228	572 aa	Known RBP	4.12	□□□□□ -1.75
ATG16	YMR159C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
ATG16	YMR159C	RMD8	P43620	662 aa		4.12	□□□□□ -1.75
ATG16	YMR159C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
ATG16	YMR159C	HEF3	P53978	1044 aa	Known RBP	4.12	□□□□□ -1.75
ATG16	YMR159C	SEC39	Q12745	709 aa		4.12	□□□□□ -1.75
ATG16	YMR159C	FOB1	O13329	566 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	SPC110	P32380	944 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	YME1	P32795	747 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	SWE1	P32944	819 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	MSN2	P33748	704 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	SRO77	P38163	1010 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	VPS52	P39904	641 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	ROK1	P45818	564 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG16	YMR159C	COS10	P52924	374 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	MFB1	Q04922	465 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	IVY1	Q04934	453 aa		4.11	□□□□□ -1.75
ATG16	YMR159C	MRPL51	Q06090	140 aa	Predicted RBP	4.11	□□□□□ -1.75
ATG16	YMR159C	LSP1	Q12230	341 aa	Known RBP	4.11	□□□□□ -1.75
ATG16	YMR159C	MRP7	P12687	371 aa		4.1	□□□□□ -1.75
ATG16	YMR159C	EXO70	P19658	623 aa		4.1	□□□□□ -1.75
ATG16	YMR159C	PTR2	P32901	601 aa		4.1	□□□□□ -1.75
ATG16	YMR159C	UTP9	P38882	575 aa	Known RBP	4.1	□□□□□ -1.75
ATG16	YMR159C	SPO22	P40511	975 aa		4.1	□□□□□ -1.75
ATG16	YMR159C	PET130	P47065	347 aa		4.1	□□□□□ -1.75
ATG16	YMR159C	YDL186W	P48568	277 aa		4.1	□□□□□ -1.75
ATG16	YMR159C	RPT6	Q01939	405 aa	Known RBP	4.1	□□□□□ -1.75
ATG16	YMR159C	VPS74	Q06385	345 aa		4.1	□□□□□ -1.75
ATG16	YMR159C	CYB2	P00175	591 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	MBB1	P39534	108 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	RPH1	P39956	796 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	YEL057C	P39983	233 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	RPR2	P40571	144 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	ARF3	P40994	183 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
ATG16	YMR159C	TWF1	P53250	332 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	GPI1	P53306	609 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	SLG1	P54867	378 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	RBS1	Q05672	457 aa	Known RBP	4.09	□□□□□ -1.75
ATG16	YMR159C	PHO92	Q06390	306 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	SET6	Q12529	373 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	YDL007C-A	Q2V2Q0	85 aa		4.09	□□□□□ -1.75
ATG16	YMR159C	ARG3	P05150	338 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	BUD14	P27637	709 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	FRE1	P32791	686 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	ERP2	P39704	215 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	YJL213W	P40896	331 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	YFR016C	P43597	1233 aa	Known RBP	4.08	□□□□□ -1.76
ATG16	YMR159C	ZPR1	P53303	486 aa	Known RBP	4.08	□□□□□ -1.76
ATG16	YMR159C	IMP4	P53941	290 aa	Known RBP	4.08	□□□□□ -1.76
ATG16	YMR159C	TIM10	P87108	93 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	IRC15	Q02733	499 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	RLI1	Q03195	608 aa	Known RBP	4.08	□□□□□ -1.76
ATG16	YMR159C	KEL3	Q08979	651 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG16	YMR159C	AYT1	Q12226	474 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	RTP1	Q12751	981 aa		4.08	□□□□□ -1.76
ATG16	YMR159C	COR1	P07256	457 aa		4.07	□□□□□ -1.76
ATG16	YMR159C	RPL31B	P0C2H9	113 aa	Known RBP	4.07	□□□□□ -1.76
ATG16	YMR159C	ATR1	P13090	542 aa		4.07	□□□□□ -1.76
ATG16	YMR159C	GLK1	P17709	500 aa	Known RBP	4.07	□□□□□ -1.76
ATG16	YMR159C	MFT1	P33441	392 aa	Known RBP	4.07	□□□□□ -1.76
ATG16	YMR159C	SEC66	P33754	206 aa		4.07	□□□□□ -1.76
ATG16	YMR159C	CST26	P38226	397 aa		4.07	□□□□□ -1.76
ATG16	YMR159C	MTC4	P38335	694 aa	Known RBP	4.07	□□□□□ -1.76
ATG16	YMR159C	MET18	P40469	1032 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms